data_4KXF # _model_server_result.job_id Z7M5IvlKCPmav-yxkKlx-w _model_server_result.datetime_utc '2024-12-21 11:34:51' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4kxf # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"K","auth_seq_id":1102}' # _entry.id 4KXF # _exptl.entry_id 4KXF _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4KXF _cell.length_a 334.052 _cell.length_b 334.052 _cell.length_c 177.567 _cell.Z_PDB 64 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4KXF _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 ? monomeric 1 author_defined_assembly 3 ? monomeric 1 author_defined_assembly 4 ? monomeric 1 author_defined_assembly 5 ? monomeric 1 author_defined_assembly 6 ? monomeric 1 author_defined_assembly 7 ? monomeric 1 author_defined_assembly 8 PISA tetrameric 4 software_defined_assembly 9 PISA tetrameric 4 software_defined_assembly 10 PISA tetrameric 4 software_defined_assembly 11 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,I 1 1 B,J,K 2 1 C,L 3 1 D,M 4 1 E,N 5 1 F,O 6 1 G,P,Q 7 1 H,R 8 1 A,I 9 1,2 H,R 9 3,4 B,D,E,F,J,K,M,N,O 10 1 C,G,L,P,Q 11 1,5 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 8_555 -y,-x,-z+1/2 0 -1 0 -1 0 0 0 0 -1 0 0 88.7835 3 'crystal symmetry operation' 4_444 y-1/2,-x-1/2,z-1/4 0 1 0 -1 0 0 0 0 1 -167.026 -167.026 -44.39175 4 'crystal symmetry operation' 6_555 x+1/2,-y+1/2,-z+3/4 1 0 0 0 -1 0 0 0 -1 167.026 167.026 133.17525 5 'crystal symmetry operation' 8_556 -y,-x,-z+3/2 0 -1 0 -1 0 0 0 0 -1 0 0 266.3505 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 K N N ? 3 Q N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C GLU 532 K GLU 532 1_555 A N SEP 533 K SEP 533 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale2 A C SEP 533 K SEP 533 1_555 A N ILE 534 K ILE 534 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale3 B C GLU 532 B GLU 532 1_555 B N SEP 533 B SEP 533 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale4 B C SEP 533 B SEP 533 1_555 B N ILE 534 B ILE 534 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale5 C C GLU 532 D GLU 532 1_555 C N SEP 533 D SEP 533 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale6 C C SEP 533 D SEP 533 1_555 C N ILE 534 D ILE 534 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale7 D C GLU 532 F GLU 532 1_555 D N SEP 533 F SEP 533 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale8 D C SEP 533 F SEP 533 1_555 D N ILE 534 F ILE 534 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale9 E C GLU 532 H GLU 532 1_555 E N SEP 533 H SEP 533 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale10 E C SEP 533 H SEP 533 1_555 E N ILE 534 H ILE 534 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale11 F C GLU 532 L GLU 532 1_555 F N SEP 533 L SEP 533 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? covale ? covale12 F C SEP 533 L SEP 533 1_555 F N ILE 534 L ILE 534 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale13 G C SEP 533 N SEP 533 1_555 G N ILE 534 N ILE 534 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 350 n n S O2 SO4 doub 351 n n S O3 SO4 sing 352 n n S O4 SO4 sing 353 n n # _atom_sites.entry_id 4KXF _atom_sites.fract_transf_matrix[1][1] 0.002994 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.002994 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005632 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code I 2 ADP K 1 1101 1101 ADP ADP . J 2 ADP B 1 1101 1101 ADP ADP . K 3 SO4 B 1 1102 1102 SO4 SO4 . L 2 ADP D 1 1101 1101 ADP ADP . M 2 ADP F 1 1101 1101 ADP ADP . N 2 ADP H 1 1101 1101 ADP ADP . O 2 ADP L 1 1101 1074 ADP ADP . P 2 ADP N 1 1101 1101 ADP ADP . Q 3 SO4 N 1 1102 1102 SO4 SO4 . R 2 ADP P 1 1101 1101 ADP ADP . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . K 3 -57.699 92.562 103.132 1 106.73 ? S SO4 1102 B 1 HETATM 2 O O1 SO4 . . . K 3 -58.8 93.112 102.346 1 93.87 ? O1 SO4 1102 B 1 HETATM 3 O O2 SO4 . . . K 3 -56.99 91.56 102.342 1 94.99 ? O2 SO4 1102 B 1 HETATM 4 O O3 SO4 . . . K 3 -56.777 93.635 103.493 1 81.58 ? O3 SO4 1102 B 1 HETATM 5 O O4 SO4 . . . K 3 -58.228 91.945 104.345 1 103.7 ? O4 SO4 1102 B 1 # _model_server_stats.io_time_ms 121 _model_server_stats.parse_time_ms 294 _model_server_stats.create_model_time_ms 269 _model_server_stats.query_time_ms 331 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 5 #