data_4KXK # _model_server_result.job_id OuTUknUsy6S_PloBujJstw _model_server_result.datetime_utc '2024-11-26 13:50:35' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4kxk # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":402}' # _entry.id 4KXK # _exptl.entry_id 4KXK _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 78.133 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description BETA-MERCAPTOETHANOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 87.85 _cell.angle_beta 83.62 _cell.angle_gamma 89.79 _cell.entry_id 4KXK _cell.length_a 57.593 _cell.length_b 74.698 _cell.length_c 91.209 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4KXK _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C2 H6 O S' _chem_comp.formula_weight 78.133 _chem_comp.id BME _chem_comp.mon_nstd_flag . _chem_comp.name BETA-MERCAPTOETHANOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 BME sing 70 n n C1 O1 BME sing 71 n n C1 H11 BME sing 72 n n C1 H12 BME sing 73 n n C2 S2 BME sing 74 n n C2 H21 BME sing 75 n n C2 H22 BME sing 76 n n O1 HO1 BME sing 77 n n S2 HS2 BME sing 78 n n # _atom_sites.entry_id 4KXK _atom_sites.fract_transf_matrix[1][1] 0.017363 _atom_sites.fract_transf_matrix[1][2] -0.000064 _atom_sites.fract_transf_matrix[1][3] -0.00194 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013387 _atom_sites.fract_transf_matrix[2][3] -0.0005 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01104 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 SO4 A 1 401 401 SO4 SO4 . F 4 BME A 1 402 600 BME BME . G 3 SO4 C 1 401 401 SO4 SO4 . H 5 HOH A 1 501 1 HOH HOH . H 5 HOH A 2 502 2 HOH HOH . H 5 HOH A 3 503 6 HOH HOH . H 5 HOH A 4 504 7 HOH HOH . H 5 HOH A 5 505 13 HOH HOH . H 5 HOH A 6 506 14 HOH HOH . H 5 HOH A 7 507 16 HOH HOH . H 5 HOH A 8 508 21 HOH HOH . H 5 HOH A 9 509 22 HOH HOH . H 5 HOH A 10 510 35 HOH HOH . H 5 HOH A 11 511 37 HOH HOH . H 5 HOH A 12 512 38 HOH HOH . H 5 HOH A 13 513 39 HOH HOH . H 5 HOH A 14 514 42 HOH HOH . I 5 HOH C 1 501 3 HOH HOH . I 5 HOH C 2 502 4 HOH HOH . I 5 HOH C 3 503 9 HOH HOH . I 5 HOH C 4 504 10 HOH HOH . I 5 HOH C 5 505 15 HOH HOH . I 5 HOH C 6 506 18 HOH HOH . I 5 HOH C 7 507 20 HOH HOH . I 5 HOH C 8 508 23 HOH HOH . I 5 HOH C 9 509 24 HOH HOH . I 5 HOH C 10 510 26 HOH HOH . I 5 HOH C 11 511 29 HOH HOH . I 5 HOH C 12 512 30 HOH HOH . I 5 HOH C 13 513 32 HOH HOH . I 5 HOH C 14 514 33 HOH HOH . I 5 HOH C 15 515 34 HOH HOH . I 5 HOH C 16 516 36 HOH HOH . I 5 HOH C 17 517 40 HOH HOH . J 5 HOH B 1 701 12 HOH HOH . J 5 HOH B 2 702 27 HOH HOH . J 5 HOH B 3 703 28 HOH HOH . J 5 HOH B 4 704 31 HOH HOH . J 5 HOH B 5 705 41 HOH HOH . K 5 HOH D 1 701 5 HOH HOH . K 5 HOH D 2 702 8 HOH HOH . K 5 HOH D 3 703 11 HOH HOH . K 5 HOH D 4 704 25 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 BME . . . F 4 4.113 3.673 1.681 1 31.62 ? C1 BME 402 A 1 HETATM 2 C C2 BME . . . F 4 4.046 2.767 0.476 1 36.35 ? C2 BME 402 A 1 HETATM 3 O O1 BME . . . F 4 3.155 4.674 1.444 1 27.29 ? O1 BME 402 A 1 HETATM 4 S S2 BME . . . F 4 5.511 1.721 0.463 1 45.69 ? S2 BME 402 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 16 _model_server_stats.query_time_ms 285 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 4 #