data_4KZJ # _model_server_result.job_id KAuKWTt_oV8TxyWolu33XA _model_server_result.datetime_utc '2024-11-26 04:15:42' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4kzj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":302}' # _entry.id 4KZJ # _exptl.entry_id 4KZJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4KZJ _cell.length_a 74.402 _cell.length_b 76.6 _cell.length_c 127.369 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4KZJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,F 1 1 B,D,E,G 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 129 n n C1 C2 GOL sing 130 n n C1 H11 GOL sing 131 n n C1 H12 GOL sing 132 n n O1 HO1 GOL sing 133 n n C2 O2 GOL sing 134 n n C2 C3 GOL sing 135 n n C2 H2 GOL sing 136 n n O2 HO2 GOL sing 137 n n C3 O3 GOL sing 138 n n C3 H31 GOL sing 139 n n C3 H32 GOL sing 140 n n O3 HO3 GOL sing 141 n n # _atom_sites.entry_id 4KZJ _atom_sites.fract_transf_matrix[1][1] 0.01344 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013055 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007851 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 GOL B 1 301 301 GOL GOL . D 2 GOL A 1 301 301 GOL GOL . E 2 GOL A 1 302 302 GOL GOL . F 3 HOH B 1 401 1 HOH HOH . F 3 HOH B 2 402 4 HOH HOH . F 3 HOH B 3 403 5 HOH HOH . F 3 HOH B 4 404 6 HOH HOH . F 3 HOH B 5 405 10 HOH HOH . F 3 HOH B 6 406 11 HOH HOH . F 3 HOH B 7 407 14 HOH HOH . F 3 HOH B 8 408 15 HOH HOH . F 3 HOH B 9 409 16 HOH HOH . F 3 HOH B 10 410 18 HOH HOH . F 3 HOH B 11 411 19 HOH HOH . F 3 HOH B 12 412 22 HOH HOH . F 3 HOH B 13 413 23 HOH HOH . F 3 HOH B 14 414 24 HOH HOH . F 3 HOH B 15 415 26 HOH HOH . F 3 HOH B 16 416 29 HOH HOH . F 3 HOH B 17 417 33 HOH HOH . F 3 HOH B 18 418 37 HOH HOH . F 3 HOH B 19 419 38 HOH HOH . F 3 HOH B 20 420 39 HOH HOH . F 3 HOH B 21 421 41 HOH HOH . F 3 HOH B 22 422 43 HOH HOH . F 3 HOH B 23 423 44 HOH HOH . F 3 HOH B 24 424 45 HOH HOH . F 3 HOH B 25 425 48 HOH HOH . F 3 HOH B 26 426 49 HOH HOH . F 3 HOH B 27 427 51 HOH HOH . F 3 HOH B 28 428 53 HOH HOH . F 3 HOH B 29 429 55 HOH HOH . F 3 HOH B 30 430 57 HOH HOH . F 3 HOH B 31 431 59 HOH HOH . F 3 HOH B 32 432 60 HOH HOH . F 3 HOH B 33 433 61 HOH HOH . F 3 HOH B 34 434 62 HOH HOH . F 3 HOH B 35 435 63 HOH HOH . F 3 HOH B 36 436 69 HOH HOH . F 3 HOH B 37 437 71 HOH HOH . F 3 HOH B 38 438 72 HOH HOH . F 3 HOH B 39 439 75 HOH HOH . F 3 HOH B 40 440 76 HOH HOH . F 3 HOH B 41 441 77 HOH HOH . F 3 HOH B 42 442 83 HOH HOH . F 3 HOH B 43 443 84 HOH HOH . F 3 HOH B 44 444 88 HOH HOH . F 3 HOH B 45 445 89 HOH HOH . F 3 HOH B 46 446 90 HOH HOH . F 3 HOH B 47 447 91 HOH HOH . F 3 HOH B 48 448 92 HOH HOH . F 3 HOH B 49 449 93 HOH HOH . F 3 HOH B 50 450 94 HOH HOH . F 3 HOH B 51 451 98 HOH HOH . F 3 HOH B 52 452 101 HOH HOH . F 3 HOH B 53 453 102 HOH HOH . F 3 HOH B 54 454 104 HOH HOH . F 3 HOH B 55 455 105 HOH HOH . F 3 HOH B 56 456 106 HOH HOH . F 3 HOH B 57 457 108 HOH HOH . F 3 HOH B 58 458 112 HOH HOH . F 3 HOH B 59 459 113 HOH HOH . F 3 HOH B 60 460 114 HOH HOH . F 3 HOH B 61 461 116 HOH HOH . F 3 HOH B 62 462 118 HOH HOH . F 3 HOH B 63 463 121 HOH HOH . F 3 HOH B 64 464 123 HOH HOH . F 3 HOH B 65 465 127 HOH HOH . F 3 HOH B 66 466 128 HOH HOH . F 3 HOH B 67 467 132 HOH HOH . F 3 HOH B 68 468 134 HOH HOH . F 3 HOH B 69 469 135 HOH HOH . F 3 HOH B 70 470 136 HOH HOH . F 3 HOH B 71 471 139 HOH HOH . F 3 HOH B 72 472 140 HOH HOH . F 3 HOH B 73 473 142 HOH HOH . F 3 HOH B 74 474 146 HOH HOH . F 3 HOH B 75 475 147 HOH HOH . F 3 HOH B 76 476 149 HOH HOH . F 3 HOH B 77 477 152 HOH HOH . F 3 HOH B 78 478 155 HOH HOH . F 3 HOH B 79 479 156 HOH HOH . F 3 HOH B 80 480 158 HOH HOH . F 3 HOH B 81 481 159 HOH HOH . F 3 HOH B 82 482 160 HOH HOH . F 3 HOH B 83 483 162 HOH HOH . F 3 HOH B 84 484 165 HOH HOH . F 3 HOH B 85 485 166 HOH HOH . F 3 HOH B 86 486 167 HOH HOH . F 3 HOH B 87 487 169 HOH HOH . F 3 HOH B 88 488 172 HOH HOH . F 3 HOH B 89 489 177 HOH HOH . F 3 HOH B 90 490 178 HOH HOH . F 3 HOH B 91 491 182 HOH HOH . F 3 HOH B 92 492 183 HOH HOH . F 3 HOH B 93 493 184 HOH HOH . F 3 HOH B 94 494 185 HOH HOH . F 3 HOH B 95 495 187 HOH HOH . F 3 HOH B 96 496 190 HOH HOH . F 3 HOH B 97 497 192 HOH HOH . F 3 HOH B 98 498 194 HOH HOH . F 3 HOH B 99 499 196 HOH HOH . F 3 HOH B 100 500 198 HOH HOH . F 3 HOH B 101 501 200 HOH HOH . F 3 HOH B 102 502 206 HOH HOH . F 3 HOH B 103 503 210 HOH HOH . F 3 HOH B 104 504 211 HOH HOH . F 3 HOH B 105 505 213 HOH HOH . F 3 HOH B 106 506 220 HOH HOH . F 3 HOH B 107 507 225 HOH HOH . F 3 HOH B 108 508 227 HOH HOH . F 3 HOH B 109 509 228 HOH HOH . F 3 HOH B 110 510 229 HOH HOH . F 3 HOH B 111 511 230 HOH HOH . F 3 HOH B 112 512 231 HOH HOH . F 3 HOH B 113 513 233 HOH HOH . F 3 HOH B 114 514 237 HOH HOH . F 3 HOH B 115 515 238 HOH HOH . F 3 HOH B 116 516 239 HOH HOH . F 3 HOH B 117 517 240 HOH HOH . F 3 HOH B 118 518 241 HOH HOH . F 3 HOH B 119 519 243 HOH HOH . F 3 HOH B 120 520 250 HOH HOH . F 3 HOH B 121 521 251 HOH HOH . F 3 HOH B 122 522 252 HOH HOH . F 3 HOH B 123 523 254 HOH HOH . F 3 HOH B 124 524 255 HOH HOH . G 3 HOH A 1 401 2 HOH HOH . G 3 HOH A 2 402 3 HOH HOH . G 3 HOH A 3 403 7 HOH HOH . G 3 HOH A 4 404 8 HOH HOH . G 3 HOH A 5 405 9 HOH HOH . G 3 HOH A 6 406 12 HOH HOH . G 3 HOH A 7 407 13 HOH HOH . G 3 HOH A 8 408 17 HOH HOH . G 3 HOH A 9 409 20 HOH HOH . G 3 HOH A 10 410 21 HOH HOH . G 3 HOH A 11 411 25 HOH HOH . G 3 HOH A 12 412 27 HOH HOH . G 3 HOH A 13 413 28 HOH HOH . G 3 HOH A 14 414 30 HOH HOH . G 3 HOH A 15 415 31 HOH HOH . G 3 HOH A 16 416 32 HOH HOH . G 3 HOH A 17 417 34 HOH HOH . G 3 HOH A 18 418 35 HOH HOH . G 3 HOH A 19 419 36 HOH HOH . G 3 HOH A 20 420 40 HOH HOH . G 3 HOH A 21 421 42 HOH HOH . G 3 HOH A 22 422 46 HOH HOH . G 3 HOH A 23 423 47 HOH HOH . G 3 HOH A 24 424 50 HOH HOH . G 3 HOH A 25 425 52 HOH HOH . G 3 HOH A 26 426 54 HOH HOH . G 3 HOH A 27 427 56 HOH HOH . G 3 HOH A 28 428 58 HOH HOH . G 3 HOH A 29 429 64 HOH HOH . G 3 HOH A 30 430 65 HOH HOH . G 3 HOH A 31 431 67 HOH HOH . G 3 HOH A 32 432 68 HOH HOH . G 3 HOH A 33 433 70 HOH HOH . G 3 HOH A 34 434 73 HOH HOH . G 3 HOH A 35 435 74 HOH HOH . G 3 HOH A 36 436 78 HOH HOH . G 3 HOH A 37 437 79 HOH HOH . G 3 HOH A 38 438 80 HOH HOH . G 3 HOH A 39 439 81 HOH HOH . G 3 HOH A 40 440 82 HOH HOH . G 3 HOH A 41 441 85 HOH HOH . G 3 HOH A 42 442 86 HOH HOH . G 3 HOH A 43 443 87 HOH HOH . G 3 HOH A 44 444 95 HOH HOH . G 3 HOH A 45 445 96 HOH HOH . G 3 HOH A 46 446 97 HOH HOH . G 3 HOH A 47 447 99 HOH HOH . G 3 HOH A 48 448 100 HOH HOH . G 3 HOH A 49 449 103 HOH HOH . G 3 HOH A 50 450 107 HOH HOH . G 3 HOH A 51 451 109 HOH HOH . G 3 HOH A 52 452 110 HOH HOH . G 3 HOH A 53 453 111 HOH HOH . G 3 HOH A 54 454 115 HOH HOH . G 3 HOH A 55 455 117 HOH HOH . G 3 HOH A 56 456 119 HOH HOH . G 3 HOH A 57 457 120 HOH HOH . G 3 HOH A 58 458 122 HOH HOH . G 3 HOH A 59 459 124 HOH HOH . G 3 HOH A 60 460 125 HOH HOH . G 3 HOH A 61 461 126 HOH HOH . G 3 HOH A 62 462 129 HOH HOH . G 3 HOH A 63 463 130 HOH HOH . G 3 HOH A 64 464 131 HOH HOH . G 3 HOH A 65 465 133 HOH HOH . G 3 HOH A 66 466 137 HOH HOH . G 3 HOH A 67 467 138 HOH HOH . G 3 HOH A 68 468 141 HOH HOH . G 3 HOH A 69 469 144 HOH HOH . G 3 HOH A 70 470 145 HOH HOH . G 3 HOH A 71 471 148 HOH HOH . G 3 HOH A 72 472 150 HOH HOH . G 3 HOH A 73 473 151 HOH HOH . G 3 HOH A 74 474 153 HOH HOH . G 3 HOH A 75 475 154 HOH HOH . G 3 HOH A 76 476 157 HOH HOH . G 3 HOH A 77 477 161 HOH HOH . G 3 HOH A 78 478 163 HOH HOH . G 3 HOH A 79 479 164 HOH HOH . G 3 HOH A 80 480 168 HOH HOH . G 3 HOH A 81 481 170 HOH HOH . G 3 HOH A 82 482 171 HOH HOH . G 3 HOH A 83 483 173 HOH HOH . G 3 HOH A 84 484 174 HOH HOH . G 3 HOH A 85 485 175 HOH HOH . G 3 HOH A 86 486 176 HOH HOH . G 3 HOH A 87 487 179 HOH HOH . G 3 HOH A 88 488 180 HOH HOH . G 3 HOH A 89 489 181 HOH HOH . G 3 HOH A 90 490 186 HOH HOH . G 3 HOH A 91 491 188 HOH HOH . G 3 HOH A 92 492 189 HOH HOH . G 3 HOH A 93 493 191 HOH HOH . G 3 HOH A 94 494 193 HOH HOH . G 3 HOH A 95 495 195 HOH HOH . G 3 HOH A 96 496 197 HOH HOH . G 3 HOH A 97 497 199 HOH HOH . G 3 HOH A 98 498 201 HOH HOH . G 3 HOH A 99 499 202 HOH HOH . G 3 HOH A 100 500 203 HOH HOH . G 3 HOH A 101 501 204 HOH HOH . G 3 HOH A 102 502 205 HOH HOH . G 3 HOH A 103 503 207 HOH HOH . G 3 HOH A 104 504 208 HOH HOH . G 3 HOH A 105 505 209 HOH HOH . G 3 HOH A 106 506 218 HOH HOH . G 3 HOH A 107 507 219 HOH HOH . G 3 HOH A 108 508 223 HOH HOH . G 3 HOH A 109 509 224 HOH HOH . G 3 HOH A 110 510 234 HOH HOH . G 3 HOH A 111 511 235 HOH HOH . G 3 HOH A 112 512 253 HOH HOH . G 3 HOH A 113 513 257 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . E 2 -0.492 -10.221 9.075 1 44.55 ? C1 GOL 302 A 1 HETATM 2 O O1 GOL . . . E 2 -0.155 -10.9 7.838 1 40.84 ? O1 GOL 302 A 1 HETATM 3 C C2 GOL . . . E 2 -1.748 -10.838 9.717 1 39.62 ? C2 GOL 302 A 1 HETATM 4 O O2 GOL . . . E 2 -2.951 -10.413 9.07 1 39.32 ? O2 GOL 302 A 1 HETATM 5 C C3 GOL . . . E 2 -1.834 -10.353 11.152 1 45.11 ? C3 GOL 302 A 1 HETATM 6 O O3 GOL . . . E 2 -2.779 -11.124 11.877 1 47.73 ? O3 GOL 302 A 1 # _model_server_stats.io_time_ms 48 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 361 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 6 #