data_4KZW # _model_server_result.job_id aeYyd7o8KZ2igRpGF8HMJA _model_server_result.datetime_utc '2024-11-25 17:05:14' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4kzw # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":401}' # _entry.id 4KZW # _exptl.entry_id 4KZW _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4KZW _cell.length_a 64.29 _cell.length_b 64.29 _cell.length_c 127.16 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4KZW _symmetry.cell_setting ? _symmetry.Int_Tables_number 170 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,I 1 1 B,G,H,J 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N ? 3 G N N ? 3 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 2 A CYS 79 1_555 A SG CYS 13 A CYS 90 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? disulf ? disulf2 A SG CYS 30 A CYS 107 1_555 A SG CYS 127 A CYS 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? disulf ? disulf3 A SG CYS 101 A CYS 178 1_555 A SG CYS 119 A CYS 196 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf4 B SG CYS 2 B CYS 79 1_555 B SG CYS 13 B CYS 90 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf5 B SG CYS 30 B CYS 107 1_555 B SG CYS 127 B CYS 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.053 ? disulf ? disulf6 B SG CYS 101 B CYS 178 1_555 B SG CYS 119 B CYS 196 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? metalc ? metalc1 A O VAL 39 A VAL 116 1_555 E CA CA . A CA 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.373 ? metalc ? metalc2 A OD1 ASN 41 A ASN 118 1_555 E CA CA . A CA 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.387 ? metalc ? metalc3 A OE2 GLU 45 A GLU 122 1_555 E CA CA . A CA 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.423 ? metalc ? metalc4 A OE1 GLU 45 A GLU 122 1_555 E CA CA . A CA 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.556 ? metalc ? metalc5 A OE1 GLU 69 A GLU 146 1_555 F NA NA . A NA 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.965 ? metalc ? metalc6 A OE1 GLU 91 A GLU 168 1_555 D CA CA . A CA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.478 ? metalc ? metalc7 A OE2 GLU 91 A GLU 168 1_555 D CA CA . A CA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.583 ? metalc ? metalc8 A OD1 ASN 93 A ASN 170 1_555 D CA CA . A CA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.425 ? metalc ? metalc9 A O LEU 95 A LEU 172 1_555 F NA NA . A NA 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.473 ? metalc ? metalc10 A O VAL 98 A VAL 175 1_555 F NA NA . A NA 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.277 ? metalc ? metalc11 A OD2 ASP 100 A ASP 177 1_555 F NA NA . A NA 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.377 ? metalc ? metalc12 A OD1 ASN 115 A ASN 192 1_555 D CA CA . A CA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.321 ? metalc ? metalc13 A O ASP 116 A ASP 193 1_555 D CA CA . A CA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.49 ? metalc ? metalc14 A OE2 GLU 128 A GLU 205 1_555 E CA CA . A CA 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.385 ? metalc ? metalc15 A OE1 GLU 128 A GLU 205 1_555 E CA CA . A CA 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.52 ? metalc ? metalc16 C OB1 FLC . A FLC 301 1_555 D CA CA . A CA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.451 ? metalc ? metalc17 C OA2 FLC . A FLC 301 1_555 D CA CA . A CA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.482 ? metalc ? metalc18 C OHB FLC . A FLC 301 1_555 D CA CA . A CA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.526 ? metalc ? metalc19 E CA CA . A CA 303 1_555 I O HOH . A HOH 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.498 ? metalc ? metalc20 E CA CA . A CA 303 1_555 I O HOH . A HOH 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.47 ? metalc ? metalc21 F NA NA . A NA 304 1_555 I O HOH . A HOH 472 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.406 ? metalc ? metalc22 F NA NA . A NA 304 1_555 I O HOH . A HOH 475 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.577 ? metalc ? metalc23 B O VAL 39 B VAL 116 1_555 H CA CA . B CA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.484 ? metalc ? metalc24 B OD1 ASN 41 B ASN 118 1_555 H CA CA . B CA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.459 ? metalc ? metalc25 B OE2 GLU 45 B GLU 122 1_555 H CA CA . B CA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.433 ? metalc ? metalc26 B OE1 GLU 45 B GLU 122 1_555 H CA CA . B CA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.588 ? metalc ? metalc27 B OE1 GLU 91 B GLU 168 1_555 G CA CA . B CA 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.517 ? metalc ? metalc28 B OD1 ASN 93 B ASN 170 1_555 G CA CA . B CA 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.465 ? metalc ? metalc29 B OD1 ASN 115 B ASN 192 1_555 G CA CA . B CA 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.471 ? metalc ? metalc30 B OD1 ASP 116 B ASP 193 1_555 G CA CA . B CA 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.439 ? metalc ? metalc31 B O ASP 116 B ASP 193 1_555 G CA CA . B CA 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.491 ? metalc ? metalc32 B OE2 GLU 128 B GLU 205 1_555 H CA CA . B CA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.344 ? metalc ? metalc33 B OE1 GLU 128 B GLU 205 1_555 H CA CA . B CA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.574 ? metalc ? metalc34 H CA CA . B CA 401 1_555 J O HOH . B HOH 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.502 ? metalc ? metalc35 H CA CA . B CA 401 1_555 J O HOH . B HOH 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.524 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4KZW _atom_sites.fract_transf_matrix[1][1] 0.015556 _atom_sites.fract_transf_matrix[1][2] 0.008981 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017962 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007864 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 FLC A 1 301 300 FLC FLC . D 3 CA A 1 302 400 CA CA . E 3 CA A 1 303 401 CA CA . F 4 NA A 1 304 402 NA NA . G 3 CA B 1 400 400 CA CA . H 3 CA B 1 401 401 CA CA . I 5 HOH A 1 401 1 HOH HOH . I 5 HOH A 2 402 2 HOH HOH . I 5 HOH A 3 403 2 HOH HOH . I 5 HOH A 4 404 3 HOH HOH . I 5 HOH A 5 405 4 HOH HOH . I 5 HOH A 6 406 5 HOH HOH . I 5 HOH A 7 407 6 HOH HOH . I 5 HOH A 8 408 8 HOH HOH . I 5 HOH A 9 409 13 HOH HOH . I 5 HOH A 10 410 16 HOH HOH . I 5 HOH A 11 411 19 HOH HOH . I 5 HOH A 12 412 20 HOH HOH . I 5 HOH A 13 413 22 HOH HOH . I 5 HOH A 14 414 23 HOH HOH . I 5 HOH A 15 415 25 HOH HOH . I 5 HOH A 16 416 26 HOH HOH . I 5 HOH A 17 417 27 HOH HOH . I 5 HOH A 18 418 28 HOH HOH . I 5 HOH A 19 419 30 HOH HOH . I 5 HOH A 20 420 33 HOH HOH . I 5 HOH A 21 421 36 HOH HOH . I 5 HOH A 22 422 39 HOH HOH . I 5 HOH A 23 423 41 HOH HOH . I 5 HOH A 24 424 43 HOH HOH . I 5 HOH A 25 425 45 HOH HOH . I 5 HOH A 26 426 46 HOH HOH . I 5 HOH A 27 427 47 HOH HOH . I 5 HOH A 28 428 48 HOH HOH . I 5 HOH A 29 429 52 HOH HOH . I 5 HOH A 30 430 53 HOH HOH . I 5 HOH A 31 431 54 HOH HOH . I 5 HOH A 32 432 56 HOH HOH . I 5 HOH A 33 433 58 HOH HOH . I 5 HOH A 34 434 59 HOH HOH . I 5 HOH A 35 435 61 HOH HOH . I 5 HOH A 36 436 62 HOH HOH . I 5 HOH A 37 437 63 HOH HOH . I 5 HOH A 38 438 64 HOH HOH . I 5 HOH A 39 439 65 HOH HOH . I 5 HOH A 40 440 67 HOH HOH . I 5 HOH A 41 441 70 HOH HOH . I 5 HOH A 42 442 71 HOH HOH . I 5 HOH A 43 443 72 HOH HOH . I 5 HOH A 44 444 74 HOH HOH . I 5 HOH A 45 445 77 HOH HOH . I 5 HOH A 46 446 78 HOH HOH . I 5 HOH A 47 447 79 HOH HOH . I 5 HOH A 48 448 80 HOH HOH . I 5 HOH A 49 449 81 HOH HOH . I 5 HOH A 50 450 83 HOH HOH . I 5 HOH A 51 451 84 HOH HOH . I 5 HOH A 52 452 86 HOH HOH . I 5 HOH A 53 453 91 HOH HOH . I 5 HOH A 54 454 94 HOH HOH . I 5 HOH A 55 455 95 HOH HOH . I 5 HOH A 56 456 96 HOH HOH . I 5 HOH A 57 457 97 HOH HOH . I 5 HOH A 58 458 98 HOH HOH . I 5 HOH A 59 459 101 HOH HOH . I 5 HOH A 60 460 104 HOH HOH . I 5 HOH A 61 461 106 HOH HOH . I 5 HOH A 62 462 107 HOH HOH . I 5 HOH A 63 463 108 HOH HOH . I 5 HOH A 64 464 110 HOH HOH . I 5 HOH A 65 465 111 HOH HOH . I 5 HOH A 66 466 112 HOH HOH . I 5 HOH A 67 467 113 HOH HOH . I 5 HOH A 68 468 114 HOH HOH . I 5 HOH A 69 469 117 HOH HOH . I 5 HOH A 70 470 118 HOH HOH . I 5 HOH A 71 471 119 HOH HOH . I 5 HOH A 72 472 120 HOH HOH . I 5 HOH A 73 473 123 HOH HOH . I 5 HOH A 74 474 124 HOH HOH . I 5 HOH A 75 475 125 HOH HOH . I 5 HOH A 76 476 126 HOH HOH . I 5 HOH A 77 477 128 HOH HOH . I 5 HOH A 78 478 129 HOH HOH . I 5 HOH A 79 479 133 HOH HOH . I 5 HOH A 80 480 138 HOH HOH . I 5 HOH A 81 481 139 HOH HOH . I 5 HOH A 82 482 140 HOH HOH . I 5 HOH A 83 483 145 HOH HOH . I 5 HOH A 84 484 146 HOH HOH . I 5 HOH A 85 485 147 HOH HOH . J 5 HOH B 1 501 3 HOH HOH . J 5 HOH B 2 502 4 HOH HOH . J 5 HOH B 3 503 1 HOH HOH . J 5 HOH B 4 504 7 HOH HOH . J 5 HOH B 5 505 9 HOH HOH . J 5 HOH B 6 506 10 HOH HOH . J 5 HOH B 7 507 11 HOH HOH . J 5 HOH B 8 508 12 HOH HOH . J 5 HOH B 9 509 14 HOH HOH . J 5 HOH B 10 510 15 HOH HOH . J 5 HOH B 11 511 17 HOH HOH . J 5 HOH B 12 512 18 HOH HOH . J 5 HOH B 13 513 21 HOH HOH . J 5 HOH B 14 514 24 HOH HOH . J 5 HOH B 15 515 29 HOH HOH . J 5 HOH B 16 516 31 HOH HOH . J 5 HOH B 17 517 32 HOH HOH . J 5 HOH B 18 518 34 HOH HOH . J 5 HOH B 19 519 35 HOH HOH . J 5 HOH B 20 520 37 HOH HOH . J 5 HOH B 21 521 38 HOH HOH . J 5 HOH B 22 522 40 HOH HOH . J 5 HOH B 23 523 42 HOH HOH . J 5 HOH B 24 524 44 HOH HOH . J 5 HOH B 25 525 49 HOH HOH . J 5 HOH B 26 526 50 HOH HOH . J 5 HOH B 27 527 51 HOH HOH . J 5 HOH B 28 528 55 HOH HOH . J 5 HOH B 29 529 57 HOH HOH . J 5 HOH B 30 530 60 HOH HOH . J 5 HOH B 31 531 66 HOH HOH . J 5 HOH B 32 532 68 HOH HOH . J 5 HOH B 33 533 69 HOH HOH . J 5 HOH B 34 534 73 HOH HOH . J 5 HOH B 35 535 75 HOH HOH . J 5 HOH B 36 536 76 HOH HOH . J 5 HOH B 37 537 82 HOH HOH . J 5 HOH B 38 538 85 HOH HOH . J 5 HOH B 39 539 87 HOH HOH . J 5 HOH B 40 540 88 HOH HOH . J 5 HOH B 41 541 89 HOH HOH . J 5 HOH B 42 542 90 HOH HOH . J 5 HOH B 43 543 92 HOH HOH . J 5 HOH B 44 544 93 HOH HOH . J 5 HOH B 45 545 99 HOH HOH . J 5 HOH B 46 546 100 HOH HOH . J 5 HOH B 47 547 102 HOH HOH . J 5 HOH B 48 548 103 HOH HOH . J 5 HOH B 49 549 105 HOH HOH . J 5 HOH B 50 550 109 HOH HOH . J 5 HOH B 51 551 115 HOH HOH . J 5 HOH B 52 552 116 HOH HOH . J 5 HOH B 53 553 121 HOH HOH . J 5 HOH B 54 554 122 HOH HOH . J 5 HOH B 55 555 127 HOH HOH . J 5 HOH B 56 556 130 HOH HOH . J 5 HOH B 57 557 131 HOH HOH . J 5 HOH B 58 558 132 HOH HOH . J 5 HOH B 59 559 134 HOH HOH . J 5 HOH B 60 560 135 HOH HOH . J 5 HOH B 61 561 136 HOH HOH . J 5 HOH B 62 562 137 HOH HOH . J 5 HOH B 63 563 141 HOH HOH . J 5 HOH B 64 564 142 HOH HOH . J 5 HOH B 65 565 143 HOH HOH . J 5 HOH B 66 566 144 HOH HOH . J 5 HOH B 67 567 148 HOH HOH . J 5 HOH B 68 568 149 HOH HOH . J 5 HOH B 69 569 150 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id H _atom_site.label_entity_id 3 _atom_site.Cartn_x 17.82 _atom_site.Cartn_y 25.335 _atom_site.Cartn_z 61.15 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 35.8 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 401 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 263 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #