data_4L05 # _model_server_result.job_id fF5bTTYqEHOfAHC7j5LzJA _model_server_result.datetime_utc '2025-09-16 03:20:32' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4l05 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 4L05 # _exptl.entry_id 4L05 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 63.546 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'COPPER (I) ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4L05 _cell.length_a 49.91 _cell.length_b 70.528 _cell.length_c 80.359 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4L05 _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 55 A CYS 55 1_555 A SG CYS 150 A CYS 150 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.048 ? metalc ? metalc1 A ND1 HIS 48 A HIS 48 1_555 B CU CU1 . A CU1 201 1_555 ? ? ? ? A ? ? ? ? ? ? ? 1.997 ? metalc ? metalc2 A ND1 HIS 48 A HIS 48 1_555 C CU CU . A CU 202 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.116 ? metalc ? metalc3 A NE2 HIS 50 A HIS 50 1_555 B CU CU1 . A CU1 201 1_555 ? ? ? ? A ? ? ? ? ? ? ? 1.961 ? metalc ? metalc4 A NE2 HIS 50 A HIS 50 1_555 C CU CU . A CU 202 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.184 ? metalc ? metalc5 A NE2 HIS 73 A HIS 73 1_555 C CU CU . A CU 202 1_555 ? B ? ? B ? ? ? ? ? ? ? 2.054 ? metalc ? metalc6 A ND1 HIS 73 A HIS 73 1_555 D ZN ZN . A ZN 203 1_555 ? A ? ? ? ? ? ? ? ? ? ? 1.988 ? metalc ? metalc7 A ND1 HIS 73 A HIS 73 1_555 D ZN ZN . A ZN 203 1_555 ? B ? ? ? ? ? ? ? ? ? ? 2.05 ? metalc ? metalc8 A ND1 HIS 82 A HIS 82 1_555 D ZN ZN . A ZN 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.053 ? metalc ? metalc9 A ND1 HIS 90 A HIS 90 1_555 D ZN ZN . A ZN 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? metalc ? metalc10 A OD1 ASP 93 A ASP 93 1_555 D ZN ZN . A ZN 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.951 ? metalc ? metalc11 A NE2 HIS 128 A HIS 128 1_555 B CU CU1 . A CU1 201 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.071 ? metalc ? metalc12 A NE2 HIS 128 A HIS 128 1_555 C CU CU . A CU 202 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.209 ? # _chem_comp.formula 'Cu 1' _chem_comp.formula_weight 63.546 _chem_comp.id CU1 _chem_comp.mon_nstd_flag . _chem_comp.name 'COPPER (I) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4L05 _atom_sites.fract_transf_matrix[1][1] 0.020036 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014179 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012444 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CU1 A 1 201 201 CU1 CU1 . C 3 CU A 1 202 201 CU CU1 . D 4 ZN A 1 203 202 ZN ZN . E 5 SO4 A 1 204 214 SO4 SO4 . F 6 GOL A 1 205 213 GOL GOL . G 7 HOH A 1 301 300 HOH HOH . G 7 HOH A 2 302 301 HOH HOH . G 7 HOH A 3 303 302 HOH HOH . G 7 HOH A 4 304 303 HOH HOH . G 7 HOH A 5 305 304 HOH HOH . G 7 HOH A 6 306 305 HOH HOH . G 7 HOH A 7 307 306 HOH HOH . G 7 HOH A 8 308 307 HOH HOH . G 7 HOH A 9 309 308 HOH HOH . G 7 HOH A 10 310 309 HOH HOH . G 7 HOH A 11 311 310 HOH HOH . G 7 HOH A 12 312 311 HOH HOH . G 7 HOH A 13 313 312 HOH HOH . G 7 HOH A 14 314 313 HOH HOH . G 7 HOH A 15 315 314 HOH HOH . G 7 HOH A 16 316 315 HOH HOH . G 7 HOH A 17 317 316 HOH HOH . G 7 HOH A 18 318 317 HOH HOH . G 7 HOH A 19 319 318 HOH HOH . G 7 HOH A 20 320 319 HOH HOH . G 7 HOH A 21 321 320 HOH HOH . G 7 HOH A 22 322 321 HOH HOH . G 7 HOH A 23 323 322 HOH HOH . G 7 HOH A 24 324 323 HOH HOH . G 7 HOH A 25 325 324 HOH HOH . G 7 HOH A 26 326 325 HOH HOH . G 7 HOH A 27 327 326 HOH HOH . G 7 HOH A 28 328 327 HOH HOH . G 7 HOH A 29 329 328 HOH HOH . G 7 HOH A 30 330 329 HOH HOH . G 7 HOH A 31 331 330 HOH HOH . G 7 HOH A 32 332 331 HOH HOH . G 7 HOH A 33 333 332 HOH HOH . G 7 HOH A 34 334 333 HOH HOH . G 7 HOH A 35 335 334 HOH HOH . G 7 HOH A 36 336 335 HOH HOH . G 7 HOH A 37 337 336 HOH HOH . G 7 HOH A 38 338 337 HOH HOH . G 7 HOH A 39 339 338 HOH HOH . G 7 HOH A 40 340 339 HOH HOH . G 7 HOH A 41 341 340 HOH HOH . G 7 HOH A 42 342 341 HOH HOH . G 7 HOH A 43 343 342 HOH HOH . G 7 HOH A 44 344 343 HOH HOH . G 7 HOH A 45 345 344 HOH HOH . G 7 HOH A 46 346 345 HOH HOH . G 7 HOH A 47 347 347 HOH HOH . G 7 HOH A 48 348 348 HOH HOH . G 7 HOH A 49 349 349 HOH HOH . G 7 HOH A 50 350 350 HOH HOH . G 7 HOH A 51 351 351 HOH HOH . G 7 HOH A 52 352 352 HOH HOH . G 7 HOH A 53 353 353 HOH HOH . G 7 HOH A 54 354 354 HOH HOH . G 7 HOH A 55 355 355 HOH HOH . G 7 HOH A 56 356 356 HOH HOH . G 7 HOH A 57 357 357 HOH HOH . G 7 HOH A 58 358 358 HOH HOH . G 7 HOH A 59 359 359 HOH HOH . G 7 HOH A 60 360 360 HOH HOH . G 7 HOH A 61 361 361 HOH HOH . G 7 HOH A 62 362 362 HOH HOH . G 7 HOH A 63 363 363 HOH HOH . G 7 HOH A 64 364 364 HOH HOH . G 7 HOH A 65 365 365 HOH HOH . G 7 HOH A 66 366 366 HOH HOH . G 7 HOH A 67 367 367 HOH HOH . G 7 HOH A 68 368 368 HOH HOH . G 7 HOH A 69 369 369 HOH HOH . G 7 HOH A 70 370 370 HOH HOH . G 7 HOH A 71 371 371 HOH HOH . G 7 HOH A 72 372 372 HOH HOH . G 7 HOH A 73 373 373 HOH HOH . G 7 HOH A 74 374 374 HOH HOH . G 7 HOH A 75 375 375 HOH HOH . G 7 HOH A 76 376 376 HOH HOH . G 7 HOH A 77 377 377 HOH HOH . G 7 HOH A 78 378 378 HOH HOH . G 7 HOH A 79 379 379 HOH HOH . G 7 HOH A 80 380 380 HOH HOH . G 7 HOH A 81 381 381 HOH HOH . G 7 HOH A 82 382 382 HOH HOH . G 7 HOH A 83 383 383 HOH HOH . G 7 HOH A 84 384 384 HOH HOH . G 7 HOH A 85 385 385 HOH HOH . G 7 HOH A 86 386 386 HOH HOH . G 7 HOH A 87 387 387 HOH HOH . G 7 HOH A 88 388 388 HOH HOH . G 7 HOH A 89 389 389 HOH HOH . G 7 HOH A 90 390 390 HOH HOH . G 7 HOH A 91 391 391 HOH HOH . G 7 HOH A 92 392 392 HOH HOH . G 7 HOH A 93 393 393 HOH HOH . G 7 HOH A 94 394 394 HOH HOH . G 7 HOH A 95 395 395 HOH HOH . G 7 HOH A 96 396 396 HOH HOH . G 7 HOH A 97 397 397 HOH HOH . G 7 HOH A 98 398 398 HOH HOH . G 7 HOH A 99 399 399 HOH HOH . G 7 HOH A 100 400 400 HOH HOH . G 7 HOH A 101 401 401 HOH HOH . G 7 HOH A 102 402 402 HOH HOH . G 7 HOH A 103 403 403 HOH HOH . G 7 HOH A 104 404 404 HOH HOH . G 7 HOH A 105 405 405 HOH HOH . G 7 HOH A 106 406 406 HOH HOH . G 7 HOH A 107 407 407 HOH HOH . G 7 HOH A 108 408 408 HOH HOH . G 7 HOH A 109 409 409 HOH HOH . G 7 HOH A 110 410 410 HOH HOH . G 7 HOH A 111 411 411 HOH HOH . G 7 HOH A 112 412 412 HOH HOH . G 7 HOH A 113 413 413 HOH HOH . G 7 HOH A 114 414 414 HOH HOH . G 7 HOH A 115 415 415 HOH HOH . G 7 HOH A 116 416 416 HOH HOH . G 7 HOH A 117 417 417 HOH HOH . G 7 HOH A 118 418 418 HOH HOH . G 7 HOH A 119 419 419 HOH HOH . G 7 HOH A 120 420 420 HOH HOH . G 7 HOH A 121 421 421 HOH HOH . G 7 HOH A 122 422 422 HOH HOH . G 7 HOH A 123 423 423 HOH HOH . G 7 HOH A 124 424 424 HOH HOH . G 7 HOH A 125 425 425 HOH HOH . G 7 HOH A 126 426 426 HOH HOH . G 7 HOH A 127 427 428 HOH HOH . G 7 HOH A 128 428 429 HOH HOH . G 7 HOH A 129 429 430 HOH HOH . G 7 HOH A 130 430 431 HOH HOH . G 7 HOH A 131 431 432 HOH HOH . G 7 HOH A 132 432 433 HOH HOH . G 7 HOH A 133 433 434 HOH HOH . G 7 HOH A 134 434 435 HOH HOH . G 7 HOH A 135 435 436 HOH HOH . G 7 HOH A 136 436 437 HOH HOH . G 7 HOH A 137 437 438 HOH HOH . G 7 HOH A 138 438 439 HOH HOH . G 7 HOH A 139 439 440 HOH HOH . G 7 HOH A 140 440 441 HOH HOH . G 7 HOH A 141 441 442 HOH HOH . G 7 HOH A 142 442 443 HOH HOH . G 7 HOH A 143 443 444 HOH HOH . G 7 HOH A 144 444 445 HOH HOH . G 7 HOH A 145 445 446 HOH HOH . G 7 HOH A 146 446 447 HOH HOH . G 7 HOH A 147 447 448 HOH HOH . G 7 HOH A 148 448 449 HOH HOH . G 7 HOH A 149 449 450 HOH HOH . G 7 HOH A 150 450 451 HOH HOH . G 7 HOH A 151 451 452 HOH HOH . G 7 HOH A 152 452 453 HOH HOH . G 7 HOH A 153 453 454 HOH HOH . G 7 HOH A 154 454 455 HOH HOH . G 7 HOH A 155 455 456 HOH HOH . G 7 HOH A 156 456 457 HOH HOH . G 7 HOH A 157 457 458 HOH HOH . G 7 HOH A 158 458 459 HOH HOH . G 7 HOH A 159 459 460 HOH HOH . G 7 HOH A 160 460 461 HOH HOH . G 7 HOH A 161 461 462 HOH HOH . G 7 HOH A 162 462 463 HOH HOH . G 7 HOH A 163 463 464 HOH HOH . G 7 HOH A 164 464 465 HOH HOH . G 7 HOH A 165 465 466 HOH HOH . G 7 HOH A 166 466 467 HOH HOH . G 7 HOH A 167 467 468 HOH HOH . G 7 HOH A 168 468 469 HOH HOH . G 7 HOH A 169 469 470 HOH HOH . G 7 HOH A 170 470 471 HOH HOH . G 7 HOH A 171 471 472 HOH HOH . G 7 HOH A 172 472 473 HOH HOH . G 7 HOH A 173 473 474 HOH HOH . G 7 HOH A 174 474 475 HOH HOH . G 7 HOH A 175 475 476 HOH HOH . G 7 HOH A 176 476 477 HOH HOH . G 7 HOH A 177 477 478 HOH HOH . G 7 HOH A 178 478 479 HOH HOH . G 7 HOH A 179 479 480 HOH HOH . G 7 HOH A 180 480 481 HOH HOH . G 7 HOH A 181 481 482 HOH HOH . G 7 HOH A 182 482 483 HOH HOH . G 7 HOH A 183 483 484 HOH HOH . G 7 HOH A 184 484 485 HOH HOH . G 7 HOH A 185 485 486 HOH HOH . G 7 HOH A 186 486 487 HOH HOH . G 7 HOH A 187 487 488 HOH HOH . G 7 HOH A 188 488 489 HOH HOH . G 7 HOH A 189 489 490 HOH HOH . G 7 HOH A 190 490 491 HOH HOH . G 7 HOH A 191 491 492 HOH HOH . G 7 HOH A 192 492 494 HOH HOH . G 7 HOH A 193 493 496 HOH HOH . G 7 HOH A 194 494 497 HOH HOH . G 7 HOH A 195 495 498 HOH HOH . G 7 HOH A 196 496 499 HOH HOH . G 7 HOH A 197 497 500 HOH HOH . G 7 HOH A 198 498 501 HOH HOH . G 7 HOH A 199 499 503 HOH HOH . G 7 HOH A 200 500 504 HOH HOH . G 7 HOH A 201 501 505 HOH HOH . G 7 HOH A 202 502 506 HOH HOH . G 7 HOH A 203 503 507 HOH HOH . G 7 HOH A 204 504 508 HOH HOH . G 7 HOH A 205 505 509 HOH HOH . G 7 HOH A 206 506 510 HOH HOH . G 7 HOH A 207 507 511 HOH HOH . G 7 HOH A 208 508 512 HOH HOH . G 7 HOH A 209 509 514 HOH HOH . G 7 HOH A 210 510 515 HOH HOH . G 7 HOH A 211 511 516 HOH HOH . G 7 HOH A 212 512 517 HOH HOH . G 7 HOH A 213 513 518 HOH HOH . G 7 HOH A 214 514 519 HOH HOH . G 7 HOH A 215 515 520 HOH HOH . G 7 HOH A 216 516 521 HOH HOH . G 7 HOH A 217 517 522 HOH HOH . G 7 HOH A 218 518 523 HOH HOH . G 7 HOH A 219 519 524 HOH HOH . G 7 HOH A 220 520 525 HOH HOH . G 7 HOH A 221 521 526 HOH HOH . G 7 HOH A 222 522 527 HOH HOH . G 7 HOH A 223 523 528 HOH HOH . G 7 HOH A 224 524 531 HOH HOH . G 7 HOH A 225 525 532 HOH HOH . G 7 HOH A 226 526 533 HOH HOH . G 7 HOH A 227 527 535 HOH HOH . G 7 HOH A 228 528 536 HOH HOH . G 7 HOH A 229 529 537 HOH HOH . G 7 HOH A 230 530 538 HOH HOH . G 7 HOH A 231 531 544 HOH HOH . G 7 HOH A 232 532 547 HOH HOH . G 7 HOH A 233 533 548 HOH HOH . G 7 HOH A 234 534 549 HOH HOH . G 7 HOH A 235 535 550 HOH HOH . G 7 HOH A 236 536 551 HOH HOH . G 7 HOH A 237 537 552 HOH HOH . G 7 HOH A 238 538 553 HOH HOH . G 7 HOH A 239 539 554 HOH HOH . G 7 HOH A 240 540 555 HOH HOH . G 7 HOH A 241 541 561 HOH HOH . G 7 HOH A 242 542 562 HOH HOH . G 7 HOH A 243 543 563 HOH HOH . G 7 HOH A 244 544 564 HOH HOH . G 7 HOH A 245 545 565 HOH HOH . G 7 HOH A 246 546 566 HOH HOH . G 7 HOH A 247 547 567 HOH HOH . G 7 HOH A 248 548 568 HOH HOH . G 7 HOH A 249 549 569 HOH HOH . G 7 HOH A 250 550 570 HOH HOH . G 7 HOH A 251 551 571 HOH HOH . G 7 HOH A 252 552 572 HOH HOH . G 7 HOH A 253 553 573 HOH HOH . G 7 HOH A 254 554 574 HOH HOH . G 7 HOH A 255 555 575 HOH HOH . G 7 HOH A 256 556 576 HOH HOH . G 7 HOH A 257 557 577 HOH HOH . G 7 HOH A 258 558 578 HOH HOH . G 7 HOH A 259 559 579 HOH HOH . G 7 HOH A 260 560 580 HOH HOH . G 7 HOH A 261 561 581 HOH HOH . G 7 HOH A 262 562 600 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CU _atom_site.label_atom_id CU _atom_site.label_comp_id CU1 _atom_site.label_seq_id . _atom_site.label_alt_id A _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x 16.305 _atom_site.Cartn_y 22.962 _atom_site.Cartn_z 23.144 _atom_site.occupancy 0.58 _atom_site.B_iso_or_equiv 9.32 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CU _atom_site.auth_comp_id CU1 _atom_site.auth_seq_id 201 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 19 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 340 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #