data_4L23
#
_model_server_result.job_id            jv0OemF1IDTY0vOnTatGcQ 
_model_server_result.datetime_utc      '2024-11-13 20:47:37' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4l23 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":702}' 
#
_entry.id    4L23 
#
_exptl.entry_id    4L23 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4L23 
_cell.length_a            71.628 
_cell.length_b            136.377 
_cell.length_c            151.487 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4L23 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      5 
_struct_asym.id                             F 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 129 n n 
C1 C2 GOL sing 130 n n 
C1 H11 GOL sing 131 n n 
C1 H12 GOL sing 132 n n 
O1 HO1 GOL sing 133 n n 
C2 O2 GOL sing 134 n n 
C2 C3 GOL sing 135 n n 
C2 H2 GOL sing 136 n n 
O2 HO2 GOL sing 137 n n 
C3 O3 GOL sing 138 n n 
C3 H31 GOL sing 139 n n 
C3 H32 GOL sing 140 n n 
O3 HO3 GOL sing 141 n n 
#
_atom_sites.entry_id                     4L23 
_atom_sites.fract_transf_matrix[1][1]    0.013961 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.007333 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006601 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 X6K A 1 1101 1 X6K X6K . 
D 4 SO4 A 1 1102 2 SO4 SO4 . 
E 4 SO4 B 1 701 1 SO4 SO4 . 
F 5 GOL B 1 702 1 GOL GOL . 
G 6 HOH A 1 1201 1 HOH HOH . 
G 6 HOH A 2 1202 2 HOH HOH . 
G 6 HOH A 3 1203 3 HOH HOH . 
G 6 HOH A 4 1204 4 HOH HOH . 
G 6 HOH A 5 1205 5 HOH HOH . 
G 6 HOH A 6 1206 6 HOH HOH . 
G 6 HOH A 7 1207 7 HOH HOH . 
G 6 HOH A 8 1208 8 HOH HOH . 
G 6 HOH A 9 1209 9 HOH HOH . 
G 6 HOH A 10 1210 10 HOH HOH . 
G 6 HOH A 11 1211 11 HOH HOH . 
G 6 HOH A 12 1212 12 HOH HOH . 
G 6 HOH A 13 1213 13 HOH HOH . 
G 6 HOH A 14 1214 14 HOH HOH . 
G 6 HOH A 15 1215 15 HOH HOH . 
G 6 HOH A 16 1216 16 HOH HOH . 
G 6 HOH A 17 1217 17 HOH HOH . 
G 6 HOH A 18 1218 18 HOH HOH . 
G 6 HOH A 19 1219 19 HOH HOH . 
G 6 HOH A 20 1220 20 HOH HOH . 
G 6 HOH A 21 1221 21 HOH HOH . 
G 6 HOH A 22 1222 22 HOH HOH . 
G 6 HOH A 23 1223 23 HOH HOH . 
G 6 HOH A 24 1224 24 HOH HOH . 
G 6 HOH A 25 1225 25 HOH HOH . 
G 6 HOH A 26 1226 26 HOH HOH . 
G 6 HOH A 27 1227 28 HOH HOH . 
G 6 HOH A 28 1228 29 HOH HOH . 
G 6 HOH A 29 1229 30 HOH HOH . 
G 6 HOH A 30 1230 31 HOH HOH . 
G 6 HOH A 31 1231 32 HOH HOH . 
G 6 HOH A 32 1232 33 HOH HOH . 
G 6 HOH A 33 1233 35 HOH HOH . 
G 6 HOH A 34 1234 36 HOH HOH . 
G 6 HOH A 35 1235 38 HOH HOH . 
G 6 HOH A 36 1236 39 HOH HOH . 
G 6 HOH A 37 1237 40 HOH HOH . 
G 6 HOH A 38 1238 41 HOH HOH . 
G 6 HOH A 39 1239 42 HOH HOH . 
G 6 HOH A 40 1240 44 HOH HOH . 
G 6 HOH A 41 1241 45 HOH HOH . 
G 6 HOH A 42 1242 46 HOH HOH . 
G 6 HOH A 43 1243 47 HOH HOH . 
G 6 HOH A 44 1244 50 HOH HOH . 
G 6 HOH A 45 1245 51 HOH HOH . 
G 6 HOH A 46 1246 52 HOH HOH . 
G 6 HOH A 47 1247 54 HOH HOH . 
G 6 HOH A 48 1248 55 HOH HOH . 
G 6 HOH A 49 1249 56 HOH HOH . 
G 6 HOH A 50 1250 57 HOH HOH . 
G 6 HOH A 51 1251 58 HOH HOH . 
G 6 HOH A 52 1252 59 HOH HOH . 
G 6 HOH A 53 1253 60 HOH HOH . 
G 6 HOH A 54 1254 61 HOH HOH . 
G 6 HOH A 55 1255 62 HOH HOH . 
G 6 HOH A 56 1256 63 HOH HOH . 
G 6 HOH A 57 1257 64 HOH HOH . 
G 6 HOH A 58 1258 65 HOH HOH . 
G 6 HOH A 59 1259 66 HOH HOH . 
G 6 HOH A 60 1260 67 HOH HOH . 
G 6 HOH A 61 1261 68 HOH HOH . 
G 6 HOH A 62 1262 69 HOH HOH . 
G 6 HOH A 63 1263 70 HOH HOH . 
G 6 HOH A 64 1264 71 HOH HOH . 
G 6 HOH A 65 1265 72 HOH HOH . 
G 6 HOH A 66 1266 73 HOH HOH . 
G 6 HOH A 67 1267 76 HOH HOH . 
G 6 HOH A 68 1268 77 HOH HOH . 
G 6 HOH A 69 1269 78 HOH HOH . 
G 6 HOH A 70 1270 80 HOH HOH . 
G 6 HOH A 71 1271 81 HOH HOH . 
G 6 HOH A 72 1272 82 HOH HOH . 
G 6 HOH A 73 1273 83 HOH HOH . 
G 6 HOH A 74 1274 84 HOH HOH . 
G 6 HOH A 75 1275 86 HOH HOH . 
G 6 HOH A 76 1276 87 HOH HOH . 
G 6 HOH A 77 1277 88 HOH HOH . 
G 6 HOH A 78 1278 89 HOH HOH . 
G 6 HOH A 79 1279 91 HOH HOH . 
G 6 HOH A 80 1280 92 HOH HOH . 
G 6 HOH A 81 1281 93 HOH HOH . 
G 6 HOH A 82 1282 94 HOH HOH . 
G 6 HOH A 83 1283 95 HOH HOH . 
G 6 HOH A 84 1284 96 HOH HOH . 
G 6 HOH A 85 1285 97 HOH HOH . 
G 6 HOH A 86 1286 98 HOH HOH . 
G 6 HOH A 87 1287 100 HOH HOH . 
G 6 HOH A 88 1288 101 HOH HOH . 
G 6 HOH A 89 1289 103 HOH HOH . 
G 6 HOH A 90 1290 104 HOH HOH . 
G 6 HOH A 91 1291 105 HOH HOH . 
G 6 HOH A 92 1292 107 HOH HOH . 
G 6 HOH A 93 1293 108 HOH HOH . 
G 6 HOH A 94 1294 109 HOH HOH . 
G 6 HOH A 95 1295 110 HOH HOH . 
G 6 HOH A 96 1296 111 HOH HOH . 
G 6 HOH A 97 1297 112 HOH HOH . 
G 6 HOH A 98 1298 113 HOH HOH . 
G 6 HOH A 99 1299 114 HOH HOH . 
G 6 HOH A 100 1300 117 HOH HOH . 
G 6 HOH A 101 1301 120 HOH HOH . 
G 6 HOH A 102 1302 121 HOH HOH . 
G 6 HOH A 103 1303 122 HOH HOH . 
G 6 HOH A 104 1304 124 HOH HOH . 
G 6 HOH A 105 1305 125 HOH HOH . 
G 6 HOH A 106 1306 127 HOH HOH . 
G 6 HOH A 107 1307 129 HOH HOH . 
G 6 HOH A 108 1308 130 HOH HOH . 
G 6 HOH A 109 1309 131 HOH HOH . 
G 6 HOH A 110 1310 132 HOH HOH . 
G 6 HOH A 111 1311 133 HOH HOH . 
G 6 HOH A 112 1312 135 HOH HOH . 
G 6 HOH A 113 1313 137 HOH HOH . 
G 6 HOH A 114 1314 138 HOH HOH . 
G 6 HOH A 115 1315 139 HOH HOH . 
G 6 HOH A 116 1316 140 HOH HOH . 
G 6 HOH A 117 1317 142 HOH HOH . 
G 6 HOH A 118 1318 143 HOH HOH . 
G 6 HOH A 119 1319 144 HOH HOH . 
G 6 HOH A 120 1320 145 HOH HOH . 
G 6 HOH A 121 1321 146 HOH HOH . 
G 6 HOH A 122 1322 147 HOH HOH . 
G 6 HOH A 123 1323 148 HOH HOH . 
G 6 HOH A 124 1324 149 HOH HOH . 
G 6 HOH A 125 1325 150 HOH HOH . 
G 6 HOH A 126 1326 151 HOH HOH . 
G 6 HOH A 127 1327 153 HOH HOH . 
G 6 HOH A 128 1328 155 HOH HOH . 
G 6 HOH A 129 1329 156 HOH HOH . 
G 6 HOH A 130 1330 157 HOH HOH . 
G 6 HOH A 131 1331 158 HOH HOH . 
G 6 HOH A 132 1332 159 HOH HOH . 
G 6 HOH A 133 1333 160 HOH HOH . 
G 6 HOH A 134 1334 161 HOH HOH . 
G 6 HOH A 135 1335 162 HOH HOH . 
G 6 HOH A 136 1336 164 HOH HOH . 
G 6 HOH A 137 1337 165 HOH HOH . 
G 6 HOH A 138 1338 166 HOH HOH . 
G 6 HOH A 139 1339 168 HOH HOH . 
G 6 HOH A 140 1340 169 HOH HOH . 
G 6 HOH A 141 1341 170 HOH HOH . 
G 6 HOH A 142 1342 172 HOH HOH . 
G 6 HOH A 143 1343 173 HOH HOH . 
G 6 HOH A 144 1344 174 HOH HOH . 
G 6 HOH A 145 1345 176 HOH HOH . 
G 6 HOH A 146 1346 177 HOH HOH . 
G 6 HOH A 147 1347 178 HOH HOH . 
G 6 HOH A 148 1348 179 HOH HOH . 
G 6 HOH A 149 1349 180 HOH HOH . 
G 6 HOH A 150 1350 181 HOH HOH . 
G 6 HOH A 151 1351 182 HOH HOH . 
G 6 HOH A 152 1352 183 HOH HOH . 
G 6 HOH A 153 1353 186 HOH HOH . 
G 6 HOH A 154 1354 187 HOH HOH . 
G 6 HOH A 155 1355 189 HOH HOH . 
G 6 HOH A 156 1356 190 HOH HOH . 
G 6 HOH A 157 1357 192 HOH HOH . 
G 6 HOH A 158 1358 193 HOH HOH . 
G 6 HOH A 159 1359 194 HOH HOH . 
G 6 HOH A 160 1360 195 HOH HOH . 
G 6 HOH A 161 1361 196 HOH HOH . 
G 6 HOH A 162 1362 197 HOH HOH . 
G 6 HOH A 163 1363 198 HOH HOH . 
G 6 HOH A 164 1364 199 HOH HOH . 
G 6 HOH A 165 1365 202 HOH HOH . 
G 6 HOH A 166 1366 203 HOH HOH . 
G 6 HOH A 167 1367 205 HOH HOH . 
G 6 HOH A 168 1368 206 HOH HOH . 
G 6 HOH A 169 1369 207 HOH HOH . 
G 6 HOH A 170 1370 208 HOH HOH . 
G 6 HOH A 171 1371 210 HOH HOH . 
G 6 HOH A 172 1372 211 HOH HOH . 
G 6 HOH A 173 1373 212 HOH HOH . 
G 6 HOH A 174 1374 213 HOH HOH . 
G 6 HOH A 175 1375 215 HOH HOH . 
G 6 HOH A 176 1376 216 HOH HOH . 
G 6 HOH A 177 1377 218 HOH HOH . 
G 6 HOH A 178 1378 219 HOH HOH . 
G 6 HOH A 179 1379 221 HOH HOH . 
G 6 HOH A 180 1380 222 HOH HOH . 
G 6 HOH A 181 1381 223 HOH HOH . 
G 6 HOH A 182 1382 224 HOH HOH . 
G 6 HOH A 183 1383 225 HOH HOH . 
G 6 HOH A 184 1384 226 HOH HOH . 
G 6 HOH A 185 1385 227 HOH HOH . 
G 6 HOH A 186 1386 228 HOH HOH . 
G 6 HOH A 187 1387 229 HOH HOH . 
G 6 HOH A 188 1388 230 HOH HOH . 
G 6 HOH A 189 1389 231 HOH HOH . 
G 6 HOH A 190 1390 232 HOH HOH . 
G 6 HOH A 191 1391 238 HOH HOH . 
G 6 HOH A 192 1392 239 HOH HOH . 
G 6 HOH A 193 1393 240 HOH HOH . 
G 6 HOH A 194 1394 241 HOH HOH . 
G 6 HOH A 195 1395 242 HOH HOH . 
G 6 HOH A 196 1396 243 HOH HOH . 
G 6 HOH A 197 1397 244 HOH HOH . 
G 6 HOH A 198 1398 246 HOH HOH . 
G 6 HOH A 199 1399 247 HOH HOH . 
G 6 HOH A 200 1400 248 HOH HOH . 
G 6 HOH A 201 1401 249 HOH HOH . 
G 6 HOH A 202 1402 250 HOH HOH . 
G 6 HOH A 203 1403 251 HOH HOH . 
H 6 HOH B 1 801 27 HOH HOH . 
H 6 HOH B 2 802 34 HOH HOH . 
H 6 HOH B 3 803 37 HOH HOH . 
H 6 HOH B 4 804 43 HOH HOH . 
H 6 HOH B 5 805 48 HOH HOH . 
H 6 HOH B 6 806 49 HOH HOH . 
H 6 HOH B 7 807 53 HOH HOH . 
H 6 HOH B 8 808 74 HOH HOH . 
H 6 HOH B 9 809 75 HOH HOH . 
H 6 HOH B 10 810 79 HOH HOH . 
H 6 HOH B 11 811 85 HOH HOH . 
H 6 HOH B 12 812 90 HOH HOH . 
H 6 HOH B 13 813 99 HOH HOH . 
H 6 HOH B 14 814 102 HOH HOH . 
H 6 HOH B 15 815 106 HOH HOH . 
H 6 HOH B 16 816 115 HOH HOH . 
H 6 HOH B 17 817 116 HOH HOH . 
H 6 HOH B 18 818 118 HOH HOH . 
H 6 HOH B 19 819 119 HOH HOH . 
H 6 HOH B 20 820 123 HOH HOH . 
H 6 HOH B 21 821 126 HOH HOH . 
H 6 HOH B 22 822 128 HOH HOH . 
H 6 HOH B 23 823 134 HOH HOH . 
H 6 HOH B 24 824 136 HOH HOH . 
H 6 HOH B 25 825 141 HOH HOH . 
H 6 HOH B 26 826 152 HOH HOH . 
H 6 HOH B 27 827 154 HOH HOH . 
H 6 HOH B 28 828 163 HOH HOH . 
H 6 HOH B 29 829 167 HOH HOH . 
H 6 HOH B 30 830 171 HOH HOH . 
H 6 HOH B 31 831 175 HOH HOH . 
H 6 HOH B 32 832 184 HOH HOH . 
H 6 HOH B 33 833 185 HOH HOH . 
H 6 HOH B 34 834 188 HOH HOH . 
H 6 HOH B 35 835 191 HOH HOH . 
H 6 HOH B 36 836 200 HOH HOH . 
H 6 HOH B 37 837 201 HOH HOH . 
H 6 HOH B 38 838 204 HOH HOH . 
H 6 HOH B 39 839 209 HOH HOH . 
H 6 HOH B 40 840 214 HOH HOH . 
H 6 HOH B 41 841 217 HOH HOH . 
H 6 HOH B 42 842 220 HOH HOH . 
H 6 HOH B 43 843 233 HOH HOH . 
H 6 HOH B 44 844 234 HOH HOH . 
H 6 HOH B 45 845 235 HOH HOH . 
H 6 HOH B 46 846 236 HOH HOH . 
H 6 HOH B 47 847 237 HOH HOH . 
H 6 HOH B 48 848 245 HOH HOH . 
H 6 HOH B 49 849 252 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . F 5 20.291 43.661 5.985 1 39.67 ? C1 GOL 702 B 1 
HETATM 2 O O1 GOL . . . F 5 19.939 44.131 4.701 1 43.47 ? O1 GOL 702 B 1 
HETATM 3 C C2 GOL . . . F 5 19.4 44.304 7.038 1 42.3 ? C2 GOL 702 B 1 
HETATM 4 O O2 GOL . . . F 5 18.189 43.594 7.128 1 35.67 ? O2 GOL 702 B 1 
HETATM 5 C C3 GOL . . . F 5 20.094 44.267 8.392 1 38.73 ? C3 GOL 702 B 1 
HETATM 6 O O3 GOL . . . F 5 19.148 43.904 9.374 1 36.39 ? O3 GOL 702 B 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    18 
_model_server_stats.query_time_ms           295 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           6 
#