data_4L2G # _model_server_result.job_id -k016zMo2KlxsasBh4FQxA _model_server_result.datetime_utc '2024-10-19 08:28:13' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4l2g # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":1201}' # _entry.id 4L2G # _exptl.entry_id 4L2G _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 7 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4L2G _cell.length_a 92.03 _cell.length_b 97.24 _cell.length_c 119.43 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4L2G _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,G,H,I,J,P,Q 1 1 C,D,K,L,M,N,O,R,S 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 7 _struct_asym.id J _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 159 A CYS 1081 1_555 H ZN ZN . A ZN 1204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.181 ? metalc ? metalc2 A ND1 HIS 162 A HIS 1084 1_555 H ZN ZN . A ZN 1204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.234 ? metalc ? metalc3 A SG CYS 167 A CYS 1089 1_555 H ZN ZN . A ZN 1204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.235 ? metalc ? metalc4 A SG CYS 170 A CYS 1092 1_555 H ZN ZN . A ZN 1204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.31 ? metalc ? metalc5 C SG CYS 159 B CYS 1081 1_555 K ZN ZN . B ZN 1201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.381 ? metalc ? metalc6 C ND1 HIS 162 B HIS 1084 1_555 K ZN ZN . B ZN 1201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.064 ? metalc ? metalc7 C SG CYS 167 B CYS 1089 1_555 K ZN ZN . B ZN 1201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.182 ? metalc ? metalc8 C SG CYS 170 B CYS 1092 1_555 K ZN ZN . B ZN 1201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.387 ? # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 158 n n C1 C2 GOL sing 159 n n C1 H11 GOL sing 160 n n C1 H12 GOL sing 161 n n O1 HO1 GOL sing 162 n n C2 O2 GOL sing 163 n n C2 C3 GOL sing 164 n n C2 H2 GOL sing 165 n n O2 HO2 GOL sing 166 n n C3 O3 GOL sing 167 n n C3 H31 GOL sing 168 n n C3 H32 GOL sing 169 n n O3 HO3 GOL sing 170 n n # _atom_sites.entry_id 4L2G _atom_sites.fract_transf_matrix[1][1] 0.010866 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010284 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008373 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 SO4 A 1 1201 1 SO4 SO4 . F 3 SO4 A 1 1202 2 SO4 SO4 . G 4 PEG A 1 1203 1 PEG PEG . H 5 ZN A 1 1204 1 ZN ZN . I 6 1V4 A 1 1205 1 1V4 F77 . J 7 GOL C 1 1201 1 GOL GOL . K 5 ZN B 1 1201 1 ZN ZN . L 3 SO4 B 1 1202 4 SO4 SO4 . M 6 1V4 B 1 1203 1 1V4 F77 . N 3 SO4 D 1 1201 3 SO4 SO4 . O 4 PEG D 1 1202 1 PEG PEG . P 8 HOH A 1 1301 4 HOH HOH . P 8 HOH A 2 1302 5 HOH HOH . P 8 HOH A 3 1303 6 HOH HOH . P 8 HOH A 4 1304 7 HOH HOH . P 8 HOH A 5 1305 10 HOH HOH . P 8 HOH A 6 1306 12 HOH HOH . P 8 HOH A 7 1307 13 HOH HOH . P 8 HOH A 8 1308 14 HOH HOH . P 8 HOH A 9 1309 15 HOH HOH . P 8 HOH A 10 1310 18 HOH HOH . P 8 HOH A 11 1311 20 HOH HOH . P 8 HOH A 12 1312 23 HOH HOH . P 8 HOH A 13 1313 33 HOH HOH . P 8 HOH A 14 1314 35 HOH HOH . P 8 HOH A 15 1315 40 HOH HOH . P 8 HOH A 16 1316 41 HOH HOH . P 8 HOH A 17 1317 42 HOH HOH . P 8 HOH A 18 1318 43 HOH HOH . P 8 HOH A 19 1319 45 HOH HOH . P 8 HOH A 20 1320 47 HOH HOH . P 8 HOH A 21 1321 48 HOH HOH . P 8 HOH A 22 1322 49 HOH HOH . P 8 HOH A 23 1323 50 HOH HOH . P 8 HOH A 24 1324 52 HOH HOH . P 8 HOH A 25 1325 54 HOH HOH . P 8 HOH A 26 1326 55 HOH HOH . P 8 HOH A 27 1327 57 HOH HOH . P 8 HOH A 28 1328 58 HOH HOH . P 8 HOH A 29 1329 60 HOH HOH . P 8 HOH A 30 1330 61 HOH HOH . P 8 HOH A 31 1331 62 HOH HOH . P 8 HOH A 32 1332 63 HOH HOH . P 8 HOH A 33 1333 67 HOH HOH . P 8 HOH A 34 1334 72 HOH HOH . P 8 HOH A 35 1335 73 HOH HOH . P 8 HOH A 36 1336 74 HOH HOH . P 8 HOH A 37 1337 76 HOH HOH . P 8 HOH A 38 1338 77 HOH HOH . P 8 HOH A 39 1339 81 HOH HOH . P 8 HOH A 40 1340 82 HOH HOH . P 8 HOH A 41 1341 83 HOH HOH . P 8 HOH A 42 1342 87 HOH HOH . P 8 HOH A 43 1343 88 HOH HOH . P 8 HOH A 44 1344 89 HOH HOH . P 8 HOH A 45 1345 90 HOH HOH . P 8 HOH A 46 1346 91 HOH HOH . P 8 HOH A 47 1347 99 HOH HOH . P 8 HOH A 48 1348 102 HOH HOH . P 8 HOH A 49 1349 105 HOH HOH . P 8 HOH A 50 1350 107 HOH HOH . P 8 HOH A 51 1351 111 HOH HOH . P 8 HOH A 52 1352 112 HOH HOH . P 8 HOH A 53 1353 113 HOH HOH . P 8 HOH A 54 1354 115 HOH HOH . P 8 HOH A 55 1355 116 HOH HOH . P 8 HOH A 56 1356 117 HOH HOH . P 8 HOH A 57 1357 120 HOH HOH . P 8 HOH A 58 1358 121 HOH HOH . P 8 HOH A 59 1359 122 HOH HOH . P 8 HOH A 60 1360 123 HOH HOH . P 8 HOH A 61 1361 124 HOH HOH . P 8 HOH A 62 1362 126 HOH HOH . P 8 HOH A 63 1363 129 HOH HOH . P 8 HOH A 64 1364 131 HOH HOH . P 8 HOH A 65 1365 132 HOH HOH . P 8 HOH A 66 1366 133 HOH HOH . P 8 HOH A 67 1367 134 HOH HOH . P 8 HOH A 68 1368 136 HOH HOH . P 8 HOH A 69 1369 139 HOH HOH . P 8 HOH A 70 1370 140 HOH HOH . P 8 HOH A 71 1371 143 HOH HOH . P 8 HOH A 72 1372 144 HOH HOH . P 8 HOH A 73 1373 147 HOH HOH . P 8 HOH A 74 1374 148 HOH HOH . P 8 HOH A 75 1375 152 HOH HOH . P 8 HOH A 76 1376 153 HOH HOH . P 8 HOH A 77 1377 154 HOH HOH . P 8 HOH A 78 1378 155 HOH HOH . P 8 HOH A 79 1379 156 HOH HOH . P 8 HOH A 80 1380 157 HOH HOH . P 8 HOH A 81 1381 159 HOH HOH . P 8 HOH A 82 1382 160 HOH HOH . P 8 HOH A 83 1383 163 HOH HOH . P 8 HOH A 84 1384 164 HOH HOH . P 8 HOH A 85 1385 165 HOH HOH . P 8 HOH A 86 1386 167 HOH HOH . P 8 HOH A 87 1387 168 HOH HOH . P 8 HOH A 88 1388 169 HOH HOH . P 8 HOH A 89 1389 170 HOH HOH . P 8 HOH A 90 1390 172 HOH HOH . P 8 HOH A 91 1391 174 HOH HOH . P 8 HOH A 92 1392 177 HOH HOH . P 8 HOH A 93 1393 178 HOH HOH . P 8 HOH A 94 1394 180 HOH HOH . P 8 HOH A 95 1395 182 HOH HOH . P 8 HOH A 96 1396 186 HOH HOH . P 8 HOH A 97 1397 187 HOH HOH . P 8 HOH A 98 1398 189 HOH HOH . P 8 HOH A 99 1399 192 HOH HOH . P 8 HOH A 100 1400 194 HOH HOH . P 8 HOH A 101 1401 197 HOH HOH . P 8 HOH A 102 1402 202 HOH HOH . P 8 HOH A 103 1403 204 HOH HOH . P 8 HOH A 104 1404 208 HOH HOH . P 8 HOH A 105 1405 209 HOH HOH . P 8 HOH A 106 1406 210 HOH HOH . P 8 HOH A 107 1407 211 HOH HOH . P 8 HOH A 108 1408 212 HOH HOH . P 8 HOH A 109 1409 213 HOH HOH . P 8 HOH A 110 1410 215 HOH HOH . P 8 HOH A 111 1411 216 HOH HOH . P 8 HOH A 112 1412 218 HOH HOH . P 8 HOH A 113 1413 219 HOH HOH . Q 8 HOH C 1 1301 16 HOH HOH . Q 8 HOH C 2 1302 22 HOH HOH . Q 8 HOH C 3 1303 37 HOH HOH . Q 8 HOH C 4 1304 38 HOH HOH . Q 8 HOH C 5 1305 66 HOH HOH . Q 8 HOH C 6 1306 70 HOH HOH . Q 8 HOH C 7 1307 86 HOH HOH . Q 8 HOH C 8 1308 92 HOH HOH . Q 8 HOH C 9 1309 106 HOH HOH . Q 8 HOH C 10 1310 135 HOH HOH . Q 8 HOH C 11 1311 142 HOH HOH . Q 8 HOH C 12 1312 146 HOH HOH . Q 8 HOH C 13 1313 190 HOH HOH . Q 8 HOH C 14 1314 195 HOH HOH . Q 8 HOH C 15 1315 199 HOH HOH . Q 8 HOH C 16 1316 205 HOH HOH . Q 8 HOH C 17 1317 217 HOH HOH . R 8 HOH B 1 1301 1 HOH HOH . R 8 HOH B 2 1302 2 HOH HOH . R 8 HOH B 3 1303 8 HOH HOH . R 8 HOH B 4 1304 9 HOH HOH . R 8 HOH B 5 1305 11 HOH HOH . R 8 HOH B 6 1306 17 HOH HOH . R 8 HOH B 7 1307 21 HOH HOH . R 8 HOH B 8 1308 24 HOH HOH . R 8 HOH B 9 1309 25 HOH HOH . R 8 HOH B 10 1310 26 HOH HOH . R 8 HOH B 11 1311 27 HOH HOH . R 8 HOH B 12 1312 28 HOH HOH . R 8 HOH B 13 1313 29 HOH HOH . R 8 HOH B 14 1314 30 HOH HOH . R 8 HOH B 15 1315 31 HOH HOH . R 8 HOH B 16 1316 32 HOH HOH . R 8 HOH B 17 1317 36 HOH HOH . R 8 HOH B 18 1318 39 HOH HOH . R 8 HOH B 19 1319 44 HOH HOH . R 8 HOH B 20 1320 46 HOH HOH . R 8 HOH B 21 1321 51 HOH HOH . R 8 HOH B 22 1322 53 HOH HOH . R 8 HOH B 23 1323 59 HOH HOH . R 8 HOH B 24 1324 64 HOH HOH . R 8 HOH B 25 1325 65 HOH HOH . R 8 HOH B 26 1326 68 HOH HOH . R 8 HOH B 27 1327 69 HOH HOH . R 8 HOH B 28 1328 71 HOH HOH . R 8 HOH B 29 1329 78 HOH HOH . R 8 HOH B 30 1330 79 HOH HOH . R 8 HOH B 31 1331 80 HOH HOH . R 8 HOH B 32 1332 84 HOH HOH . R 8 HOH B 33 1333 85 HOH HOH . R 8 HOH B 34 1334 93 HOH HOH . R 8 HOH B 35 1335 96 HOH HOH . R 8 HOH B 36 1336 97 HOH HOH . R 8 HOH B 37 1337 98 HOH HOH . R 8 HOH B 38 1338 103 HOH HOH . R 8 HOH B 39 1339 104 HOH HOH . R 8 HOH B 40 1340 108 HOH HOH . R 8 HOH B 41 1341 109 HOH HOH . R 8 HOH B 42 1342 110 HOH HOH . R 8 HOH B 43 1343 118 HOH HOH . R 8 HOH B 44 1344 119 HOH HOH . R 8 HOH B 45 1345 125 HOH HOH . R 8 HOH B 46 1346 127 HOH HOH . R 8 HOH B 47 1347 128 HOH HOH . R 8 HOH B 48 1348 130 HOH HOH . R 8 HOH B 49 1349 138 HOH HOH . R 8 HOH B 50 1350 141 HOH HOH . R 8 HOH B 51 1351 145 HOH HOH . R 8 HOH B 52 1352 149 HOH HOH . R 8 HOH B 53 1353 150 HOH HOH . R 8 HOH B 54 1354 161 HOH HOH . R 8 HOH B 55 1355 162 HOH HOH . R 8 HOH B 56 1356 171 HOH HOH . R 8 HOH B 57 1357 173 HOH HOH . R 8 HOH B 58 1358 175 HOH HOH . R 8 HOH B 59 1359 176 HOH HOH . R 8 HOH B 60 1360 179 HOH HOH . R 8 HOH B 61 1361 181 HOH HOH . R 8 HOH B 62 1362 183 HOH HOH . R 8 HOH B 63 1363 185 HOH HOH . R 8 HOH B 64 1364 188 HOH HOH . R 8 HOH B 65 1365 191 HOH HOH . R 8 HOH B 66 1366 193 HOH HOH . R 8 HOH B 67 1367 196 HOH HOH . R 8 HOH B 68 1368 198 HOH HOH . R 8 HOH B 69 1369 200 HOH HOH . R 8 HOH B 70 1370 201 HOH HOH . R 8 HOH B 71 1371 203 HOH HOH . R 8 HOH B 72 1372 206 HOH HOH . R 8 HOH B 73 1373 207 HOH HOH . R 8 HOH B 74 1374 214 HOH HOH . R 8 HOH B 75 1375 220 HOH HOH . R 8 HOH B 76 1376 221 HOH HOH . R 8 HOH B 77 1377 222 HOH HOH . R 8 HOH B 78 1378 223 HOH HOH . R 8 HOH B 79 1379 224 HOH HOH . R 8 HOH B 80 1380 225 HOH HOH . R 8 HOH B 81 1381 227 HOH HOH . R 8 HOH B 82 1382 229 HOH HOH . S 8 HOH D 1 1301 3 HOH HOH . S 8 HOH D 2 1302 19 HOH HOH . S 8 HOH D 3 1303 34 HOH HOH . S 8 HOH D 4 1304 56 HOH HOH . S 8 HOH D 5 1305 75 HOH HOH . S 8 HOH D 6 1306 94 HOH HOH . S 8 HOH D 7 1307 95 HOH HOH . S 8 HOH D 8 1308 100 HOH HOH . S 8 HOH D 9 1309 101 HOH HOH . S 8 HOH D 10 1310 114 HOH HOH . S 8 HOH D 11 1311 137 HOH HOH . S 8 HOH D 12 1312 151 HOH HOH . S 8 HOH D 13 1313 158 HOH HOH . S 8 HOH D 14 1314 166 HOH HOH . S 8 HOH D 15 1315 184 HOH HOH . S 8 HOH D 16 1316 226 HOH HOH . S 8 HOH D 17 1317 228 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . J 7 -47.732 -25.708 29.577 0.5 21.94 ? C1 GOL 1201 C 1 HETATM 2 O O1 GOL . . . J 7 -47.897 -26.348 30.855 0.5 22.25 ? O1 GOL 1201 C 1 HETATM 3 C C2 GOL . . . J 7 -46.752 -24.545 29.711 0.5 22.37 ? C2 GOL 1201 C 1 HETATM 4 O O2 GOL . . . J 7 -46.323 -24.389 31.071 0.5 22.97 ? O2 GOL 1201 C 1 HETATM 5 C C3 GOL . . . J 7 -45.531 -24.808 28.833 0.5 22.66 ? C3 GOL 1201 C 1 HETATM 6 O O3 GOL . . . J 7 -45.501 -23.876 27.739 0.5 22.65 ? O3 GOL 1201 C 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 326 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 6 #