data_4L39 # _model_server_result.job_id 4zwkWjDJ_E2GZ0RSIrN07w _model_server_result.datetime_utc '2024-11-08 12:00:49' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4l39 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":601}' # _entry.id 4L39 # _exptl.entry_id 4L39 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4L39 _cell.length_a 62.36 _cell.length_b 114.088 _cell.length_c 157.976 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4L39 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,H 1 1 B,F,G,I 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O VAL 402 A VAL 396 1_555 C MG MG . A MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.892 ? metalc ? metalc2 C MG MG . A MG 601 1_555 E O2G APC . A APC 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.403 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4L39 _atom_sites.fract_transf_matrix[1][1] 0.016036 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008765 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00633 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MG A 1 601 1 MG MG . D 3 SAL A 1 602 1 SAL SAL . E 4 APC A 1 603 1 APC APC . F 3 SAL B 1 601 1 SAL SAL . G 4 APC B 1 602 1 APC APC . H 5 HOH A 1 701 1 HOH HOH . H 5 HOH A 2 702 2 HOH HOH . H 5 HOH A 3 703 4 HOH HOH . H 5 HOH A 4 704 5 HOH HOH . H 5 HOH A 5 705 6 HOH HOH . H 5 HOH A 6 706 7 HOH HOH . H 5 HOH A 7 707 10 HOH HOH . H 5 HOH A 8 708 11 HOH HOH . H 5 HOH A 9 709 15 HOH HOH . H 5 HOH A 10 710 16 HOH HOH . H 5 HOH A 11 711 17 HOH HOH . H 5 HOH A 12 712 19 HOH HOH . H 5 HOH A 13 713 22 HOH HOH . H 5 HOH A 14 714 23 HOH HOH . H 5 HOH A 15 715 24 HOH HOH . H 5 HOH A 16 716 28 HOH HOH . H 5 HOH A 17 717 31 HOH HOH . H 5 HOH A 18 718 33 HOH HOH . H 5 HOH A 19 719 36 HOH HOH . H 5 HOH A 20 720 37 HOH HOH . H 5 HOH A 21 721 38 HOH HOH . H 5 HOH A 22 722 39 HOH HOH . H 5 HOH A 23 723 41 HOH HOH . H 5 HOH A 24 724 44 HOH HOH . H 5 HOH A 25 725 45 HOH HOH . H 5 HOH A 26 726 46 HOH HOH . H 5 HOH A 27 727 49 HOH HOH . H 5 HOH A 28 728 50 HOH HOH . H 5 HOH A 29 729 55 HOH HOH . H 5 HOH A 30 730 56 HOH HOH . H 5 HOH A 31 731 57 HOH HOH . H 5 HOH A 32 732 60 HOH HOH . H 5 HOH A 33 733 62 HOH HOH . H 5 HOH A 34 734 64 HOH HOH . H 5 HOH A 35 735 65 HOH HOH . H 5 HOH A 36 736 66 HOH HOH . H 5 HOH A 37 737 67 HOH HOH . H 5 HOH A 38 738 71 HOH HOH . H 5 HOH A 39 739 73 HOH HOH . H 5 HOH A 40 740 76 HOH HOH . H 5 HOH A 41 741 78 HOH HOH . H 5 HOH A 42 742 79 HOH HOH . H 5 HOH A 43 743 80 HOH HOH . H 5 HOH A 44 744 81 HOH HOH . H 5 HOH A 45 745 83 HOH HOH . H 5 HOH A 46 746 85 HOH HOH . H 5 HOH A 47 747 87 HOH HOH . H 5 HOH A 48 748 92 HOH HOH . H 5 HOH A 49 749 93 HOH HOH . H 5 HOH A 50 750 94 HOH HOH . H 5 HOH A 51 751 95 HOH HOH . H 5 HOH A 52 752 96 HOH HOH . H 5 HOH A 53 753 97 HOH HOH . H 5 HOH A 54 754 99 HOH HOH . H 5 HOH A 55 755 101 HOH HOH . H 5 HOH A 56 756 104 HOH HOH . H 5 HOH A 57 757 106 HOH HOH . H 5 HOH A 58 758 108 HOH HOH . H 5 HOH A 59 759 112 HOH HOH . H 5 HOH A 60 760 115 HOH HOH . H 5 HOH A 61 761 117 HOH HOH . H 5 HOH A 62 762 118 HOH HOH . H 5 HOH A 63 763 119 HOH HOH . H 5 HOH A 64 764 120 HOH HOH . H 5 HOH A 65 765 121 HOH HOH . H 5 HOH A 66 766 122 HOH HOH . H 5 HOH A 67 767 126 HOH HOH . H 5 HOH A 68 768 129 HOH HOH . H 5 HOH A 69 769 130 HOH HOH . H 5 HOH A 70 770 134 HOH HOH . H 5 HOH A 71 771 135 HOH HOH . H 5 HOH A 72 772 136 HOH HOH . H 5 HOH A 73 773 139 HOH HOH . H 5 HOH A 74 774 140 HOH HOH . H 5 HOH A 75 775 141 HOH HOH . H 5 HOH A 76 776 142 HOH HOH . H 5 HOH A 77 777 144 HOH HOH . H 5 HOH A 78 778 146 HOH HOH . H 5 HOH A 79 779 151 HOH HOH . H 5 HOH A 80 780 152 HOH HOH . H 5 HOH A 81 781 153 HOH HOH . H 5 HOH A 82 782 157 HOH HOH . H 5 HOH A 83 783 159 HOH HOH . H 5 HOH A 84 784 160 HOH HOH . H 5 HOH A 85 785 162 HOH HOH . H 5 HOH A 86 786 171 HOH HOH . H 5 HOH A 87 787 172 HOH HOH . H 5 HOH A 88 788 173 HOH HOH . H 5 HOH A 89 789 176 HOH HOH . H 5 HOH A 90 790 178 HOH HOH . H 5 HOH A 91 791 182 HOH HOH . H 5 HOH A 92 792 183 HOH HOH . H 5 HOH A 93 793 187 HOH HOH . H 5 HOH A 94 794 193 HOH HOH . H 5 HOH A 95 795 194 HOH HOH . H 5 HOH A 96 796 198 HOH HOH . H 5 HOH A 97 797 200 HOH HOH . H 5 HOH A 98 798 201 HOH HOH . H 5 HOH A 99 799 203 HOH HOH . H 5 HOH A 100 800 204 HOH HOH . H 5 HOH A 101 801 205 HOH HOH . H 5 HOH A 102 802 207 HOH HOH . H 5 HOH A 103 803 208 HOH HOH . H 5 HOH A 104 804 210 HOH HOH . H 5 HOH A 105 805 211 HOH HOH . H 5 HOH A 106 806 213 HOH HOH . I 5 HOH B 1 701 3 HOH HOH . I 5 HOH B 2 702 8 HOH HOH . I 5 HOH B 3 703 9 HOH HOH . I 5 HOH B 4 704 12 HOH HOH . I 5 HOH B 5 705 13 HOH HOH . I 5 HOH B 6 706 14 HOH HOH . I 5 HOH B 7 707 18 HOH HOH . I 5 HOH B 8 708 20 HOH HOH . I 5 HOH B 9 709 21 HOH HOH . I 5 HOH B 10 710 25 HOH HOH . I 5 HOH B 11 711 26 HOH HOH . I 5 HOH B 12 712 27 HOH HOH . I 5 HOH B 13 713 29 HOH HOH . I 5 HOH B 14 714 30 HOH HOH . I 5 HOH B 15 715 32 HOH HOH . I 5 HOH B 16 716 34 HOH HOH . I 5 HOH B 17 717 35 HOH HOH . I 5 HOH B 18 718 40 HOH HOH . I 5 HOH B 19 719 42 HOH HOH . I 5 HOH B 20 720 43 HOH HOH . I 5 HOH B 21 721 47 HOH HOH . I 5 HOH B 22 722 48 HOH HOH . I 5 HOH B 23 723 51 HOH HOH . I 5 HOH B 24 724 52 HOH HOH . I 5 HOH B 25 725 53 HOH HOH . I 5 HOH B 26 726 54 HOH HOH . I 5 HOH B 27 727 58 HOH HOH . I 5 HOH B 28 728 59 HOH HOH . I 5 HOH B 29 729 61 HOH HOH . I 5 HOH B 30 730 63 HOH HOH . I 5 HOH B 31 731 68 HOH HOH . I 5 HOH B 32 732 69 HOH HOH . I 5 HOH B 33 733 70 HOH HOH . I 5 HOH B 34 734 72 HOH HOH . I 5 HOH B 35 735 74 HOH HOH . I 5 HOH B 36 736 75 HOH HOH . I 5 HOH B 37 737 77 HOH HOH . I 5 HOH B 38 738 82 HOH HOH . I 5 HOH B 39 739 84 HOH HOH . I 5 HOH B 40 740 86 HOH HOH . I 5 HOH B 41 741 88 HOH HOH . I 5 HOH B 42 742 89 HOH HOH . I 5 HOH B 43 743 90 HOH HOH . I 5 HOH B 44 744 91 HOH HOH . I 5 HOH B 45 745 98 HOH HOH . I 5 HOH B 46 746 100 HOH HOH . I 5 HOH B 47 747 102 HOH HOH . I 5 HOH B 48 748 103 HOH HOH . I 5 HOH B 49 749 105 HOH HOH . I 5 HOH B 50 750 107 HOH HOH . I 5 HOH B 51 751 109 HOH HOH . I 5 HOH B 52 752 110 HOH HOH . I 5 HOH B 53 753 111 HOH HOH . I 5 HOH B 54 754 113 HOH HOH . I 5 HOH B 55 755 114 HOH HOH . I 5 HOH B 56 756 116 HOH HOH . I 5 HOH B 57 757 123 HOH HOH . I 5 HOH B 58 758 124 HOH HOH . I 5 HOH B 59 759 125 HOH HOH . I 5 HOH B 60 760 127 HOH HOH . I 5 HOH B 61 761 128 HOH HOH . I 5 HOH B 62 762 131 HOH HOH . I 5 HOH B 63 763 132 HOH HOH . I 5 HOH B 64 764 133 HOH HOH . I 5 HOH B 65 765 137 HOH HOH . I 5 HOH B 66 766 138 HOH HOH . I 5 HOH B 67 767 143 HOH HOH . I 5 HOH B 68 768 145 HOH HOH . I 5 HOH B 69 769 147 HOH HOH . I 5 HOH B 70 770 148 HOH HOH . I 5 HOH B 71 771 149 HOH HOH . I 5 HOH B 72 772 150 HOH HOH . I 5 HOH B 73 773 154 HOH HOH . I 5 HOH B 74 774 155 HOH HOH . I 5 HOH B 75 775 156 HOH HOH . I 5 HOH B 76 776 158 HOH HOH . I 5 HOH B 77 777 161 HOH HOH . I 5 HOH B 78 778 163 HOH HOH . I 5 HOH B 79 779 164 HOH HOH . I 5 HOH B 80 780 165 HOH HOH . I 5 HOH B 81 781 166 HOH HOH . I 5 HOH B 82 782 167 HOH HOH . I 5 HOH B 83 783 168 HOH HOH . I 5 HOH B 84 784 169 HOH HOH . I 5 HOH B 85 785 170 HOH HOH . I 5 HOH B 86 786 174 HOH HOH . I 5 HOH B 87 787 175 HOH HOH . I 5 HOH B 88 788 177 HOH HOH . I 5 HOH B 89 789 179 HOH HOH . I 5 HOH B 90 790 180 HOH HOH . I 5 HOH B 91 791 181 HOH HOH . I 5 HOH B 92 792 184 HOH HOH . I 5 HOH B 93 793 185 HOH HOH . I 5 HOH B 94 794 186 HOH HOH . I 5 HOH B 95 795 188 HOH HOH . I 5 HOH B 96 796 189 HOH HOH . I 5 HOH B 97 797 190 HOH HOH . I 5 HOH B 98 798 191 HOH HOH . I 5 HOH B 99 799 192 HOH HOH . I 5 HOH B 100 800 195 HOH HOH . I 5 HOH B 101 801 196 HOH HOH . I 5 HOH B 102 802 197 HOH HOH . I 5 HOH B 103 803 199 HOH HOH . I 5 HOH B 104 804 202 HOH HOH . I 5 HOH B 105 805 206 HOH HOH . I 5 HOH B 106 806 209 HOH HOH . I 5 HOH B 107 807 212 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 2 _atom_site.Cartn_x 29.451 _atom_site.Cartn_y -13.919 _atom_site.Cartn_z -22.791 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 44.81 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 601 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 23 _model_server_stats.query_time_ms 274 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #