data_4L41 # _model_server_result.job_id cpFPBNnHAVnkCvyrXnA05g _model_server_result.datetime_utc '2024-10-18 06:13:21' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4l41 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":401}' # _entry.id 4L41 # _exptl.entry_id 4L41 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 114.45 _cell.angle_gamma 90 _cell.entry_id 4L41 _cell.length_a 62.39 _cell.length_b 65.21 _cell.length_c 71.72 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4L41 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 7 A CYS 7 1_555 A SG CYS 121 A CYS 121 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf2 A SG CYS 29 A CYS 29 1_555 A SG CYS 112 A CYS 112 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? disulf ? disulf3 A SG CYS 74 A CYS 74 1_555 A SG CYS 92 A CYS 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf4 B SG CYS 19 C CYS 130 1_555 B SG CYS 61 C CYS 172 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.021 ? disulf ? disulf5 B SG CYS 132 C CYS 243 1_555 B SG CYS 151 C CYS 262 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? disulf ? disulf6 C SG CYS 7 B CYS 7 1_555 C SG CYS 121 B CYS 121 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf7 C SG CYS 29 B CYS 29 1_555 C SG CYS 112 B CYS 112 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf8 C SG CYS 62 B CYS 62 1_555 C SG CYS 78 B CYS 78 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf9 C SG CYS 74 B CYS 74 1_555 C SG CYS 92 B CYS 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? metalc ? metalc1 A O LYS 80 A LYS 80 1_555 D CA CA . A CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.268 ? metalc ? metalc2 A OD1 ASP 83 A ASP 83 1_555 D CA CA . A CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.348 ? metalc ? metalc3 A OD2 ASP 83 A ASP 83 1_555 D CA CA . A CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.946 ? metalc ? metalc4 A O ASP 85 A ASP 85 1_555 D CA CA . A CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.26 ? metalc ? metalc5 A OD1 ASP 88 A ASP 88 1_555 D CA CA . A CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.457 ? metalc ? metalc6 A OD1 ASP 89 A ASP 89 1_555 D CA CA . A CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.522 ? metalc ? metalc7 D CA CA . A CA 201 1_555 G O HOH . A HOH 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.652 ? metalc ? metalc8 C O LYS 80 B LYS 80 1_555 F CA CA . B CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.402 ? metalc ? metalc9 C OD1 ASP 83 B ASP 83 1_555 F CA CA . B CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.332 ? metalc ? metalc10 C O ASP 85 B ASP 85 1_555 F CA CA . B CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.368 ? metalc ? metalc11 C OD1 ASP 88 B ASP 88 1_555 F CA CA . B CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.02 ? metalc ? metalc12 C OD1 ASP 89 B ASP 89 1_555 F CA CA . B CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.327 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 290 n n S O2 SO4 doub 291 n n S O3 SO4 sing 292 n n S O4 SO4 sing 293 n n # _atom_sites.entry_id 4L41 _atom_sites.fract_transf_matrix[1][1] 0.016028 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.007288 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015335 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015317 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 3 CA A 1 201 125 CA CA . E 4 SO4 C 1 401 1 SO4 SO4 . F 3 CA B 1 201 125 CA CA . G 5 HOH A 1 301 18 HOH HOH . G 5 HOH A 2 302 24 HOH HOH . G 5 HOH A 3 303 29 HOH HOH . G 5 HOH A 4 304 30 HOH HOH . G 5 HOH A 5 305 31 HOH HOH . H 5 HOH C 1 501 1 HOH HOH . H 5 HOH C 2 502 2 HOH HOH . H 5 HOH C 3 503 3 HOH HOH . H 5 HOH C 4 504 4 HOH HOH . H 5 HOH C 5 505 5 HOH HOH . H 5 HOH C 6 506 7 HOH HOH . H 5 HOH C 7 507 8 HOH HOH . H 5 HOH C 8 508 9 HOH HOH . H 5 HOH C 9 509 12 HOH HOH . H 5 HOH C 10 510 14 HOH HOH . H 5 HOH C 11 511 16 HOH HOH . H 5 HOH C 12 512 17 HOH HOH . H 5 HOH C 13 513 20 HOH HOH . H 5 HOH C 14 514 21 HOH HOH . H 5 HOH C 15 515 25 HOH HOH . H 5 HOH C 16 516 26 HOH HOH . H 5 HOH C 17 517 27 HOH HOH . H 5 HOH C 18 518 28 HOH HOH . H 5 HOH C 19 519 32 HOH HOH . H 5 HOH C 20 520 33 HOH HOH . H 5 HOH C 21 521 34 HOH HOH . H 5 HOH C 22 522 35 HOH HOH . H 5 HOH C 23 523 36 HOH HOH . I 5 HOH B 1 301 6 HOH HOH . I 5 HOH B 2 302 11 HOH HOH . I 5 HOH B 3 303 23 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . E 4 21.339 24.761 68.615 1 47.08 ? S SO4 401 C 1 HETATM 2 O O1 SO4 . . . E 4 22.418 24.551 67.658 1 38.75 ? O1 SO4 401 C 1 HETATM 3 O O2 SO4 . . . E 4 20.238 25.46 67.965 1 47.93 ? O2 SO4 401 C 1 HETATM 4 O O3 SO4 . . . E 4 21.822 25.573 69.724 1 32.91 ? O3 SO4 401 C 1 HETATM 5 O O4 SO4 . . . E 4 20.878 23.468 69.108 1 49.67 ? O4 SO4 401 C 1 # _model_server_stats.io_time_ms 0 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 301 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #