data_4L5L # _model_server_result.job_id H1KHgD7TGdnCkWydEpFi5w _model_server_result.datetime_utc '2024-10-14 04:24:03' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4l5l # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":301}' # _entry.id 4L5L # _exptl.entry_id 4L5L _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 307.323 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLUTATHIONE _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4L5L _cell.length_a 66.272 _cell.length_b 67.455 _cell.length_c 120.701 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4L5L _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 26 A ASP 26 1_555 D ZN ZN . A ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.999 ? metalc ? metalc2 A NE2 HIS 79 A HIS 79 1_555 D ZN ZN . A ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? metalc ? metalc3 B OD1 ASP 26 B ASP 26 1_555 G ZN ZN . B ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? metalc ? metalc4 B OD2 ASP 26 B ASP 26 1_555 G ZN ZN . B ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.084 ? metalc ? metalc5 B NE2 HIS 79 B HIS 79 1_555 G ZN ZN . B ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.177 ? # _chem_comp.formula 'C10 H17 N3 O6 S' _chem_comp.formula_weight 307.323 _chem_comp.id GSH _chem_comp.mon_nstd_flag . _chem_comp.name GLUTATHIONE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 CA1 GSH sing 129 n n N1 HN11 GSH sing 130 n n N1 HN12 GSH sing 131 n n CA1 C1 GSH sing 132 n n CA1 CB1 GSH sing 133 n n CA1 HA1 GSH sing 134 n n C1 O11 GSH doub 135 n n C1 O12 GSH sing 136 n n O12 H12 GSH sing 137 n n CB1 CG1 GSH sing 138 n n CB1 HB12 GSH sing 139 n n CB1 HB13 GSH sing 140 n n CG1 CD1 GSH sing 141 n n CG1 HG12 GSH sing 142 n n CG1 HG13 GSH sing 143 n n CD1 OE1 GSH doub 144 n n CD1 N2 GSH sing 145 n n N2 CA2 GSH sing 146 n n N2 HN2 GSH sing 147 n n CA2 C2 GSH sing 148 n n CA2 CB2 GSH sing 149 n n CA2 HA2 GSH sing 150 n n C2 O2 GSH doub 151 n n C2 N3 GSH sing 152 n n CB2 SG2 GSH sing 153 n n CB2 HB22 GSH sing 154 n n CB2 HB23 GSH sing 155 n n SG2 HSG GSH sing 156 n n N3 CA3 GSH sing 157 n n N3 HN3 GSH sing 158 n n CA3 C3 GSH sing 159 n n CA3 HA31 GSH sing 160 n n CA3 HA32 GSH sing 161 n n C3 O31 GSH doub 162 n n C3 O32 GSH sing 163 n n O32 H32 GSH sing 164 n n # _atom_sites.entry_id 4L5L _atom_sites.fract_transf_matrix[1][1] 0.015089 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014825 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008285 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 GSH A 1 301 1 GSH GSH . D 3 ZN A 1 302 1 ZN ZN . E 4 MES A 1 303 1 MES MES . F 2 GSH B 1 301 2 GSH GSH . G 3 ZN B 1 302 2 ZN ZN . H 4 MES B 1 303 2 MES MES . I 5 HOH A 1 401 1 HOH HOH . I 5 HOH A 2 402 2 HOH HOH . I 5 HOH A 3 403 3 HOH HOH . I 5 HOH A 4 404 5 HOH HOH . I 5 HOH A 5 405 7 HOH HOH . I 5 HOH A 6 406 8 HOH HOH . I 5 HOH A 7 407 10 HOH HOH . I 5 HOH A 8 408 11 HOH HOH . I 5 HOH A 9 409 12 HOH HOH . I 5 HOH A 10 410 13 HOH HOH . I 5 HOH A 11 411 14 HOH HOH . I 5 HOH A 12 412 16 HOH HOH . I 5 HOH A 13 413 17 HOH HOH . I 5 HOH A 14 414 20 HOH HOH . I 5 HOH A 15 415 21 HOH HOH . I 5 HOH A 16 416 22 HOH HOH . I 5 HOH A 17 417 23 HOH HOH . I 5 HOH A 18 418 24 HOH HOH . I 5 HOH A 19 419 25 HOH HOH . I 5 HOH A 20 420 26 HOH HOH . I 5 HOH A 21 421 27 HOH HOH . I 5 HOH A 22 422 28 HOH HOH . I 5 HOH A 23 423 29 HOH HOH . I 5 HOH A 24 424 31 HOH HOH . I 5 HOH A 25 425 32 HOH HOH . I 5 HOH A 26 426 33 HOH HOH . I 5 HOH A 27 427 35 HOH HOH . I 5 HOH A 28 428 38 HOH HOH . I 5 HOH A 29 429 39 HOH HOH . I 5 HOH A 30 430 40 HOH HOH . I 5 HOH A 31 431 41 HOH HOH . I 5 HOH A 32 432 42 HOH HOH . I 5 HOH A 33 433 43 HOH HOH . I 5 HOH A 34 434 45 HOH HOH . I 5 HOH A 35 435 46 HOH HOH . I 5 HOH A 36 436 47 HOH HOH . I 5 HOH A 37 437 48 HOH HOH . I 5 HOH A 38 438 49 HOH HOH . I 5 HOH A 39 439 50 HOH HOH . I 5 HOH A 40 440 51 HOH HOH . I 5 HOH A 41 441 52 HOH HOH . I 5 HOH A 42 442 53 HOH HOH . I 5 HOH A 43 443 57 HOH HOH . I 5 HOH A 44 444 60 HOH HOH . I 5 HOH A 45 445 63 HOH HOH . I 5 HOH A 46 446 64 HOH HOH . I 5 HOH A 47 447 65 HOH HOH . I 5 HOH A 48 448 66 HOH HOH . I 5 HOH A 49 449 67 HOH HOH . I 5 HOH A 50 450 68 HOH HOH . I 5 HOH A 51 451 70 HOH HOH . I 5 HOH A 52 452 71 HOH HOH . I 5 HOH A 53 453 74 HOH HOH . I 5 HOH A 54 454 77 HOH HOH . I 5 HOH A 55 455 78 HOH HOH . I 5 HOH A 56 456 79 HOH HOH . I 5 HOH A 57 457 80 HOH HOH . I 5 HOH A 58 458 82 HOH HOH . I 5 HOH A 59 459 83 HOH HOH . I 5 HOH A 60 460 84 HOH HOH . I 5 HOH A 61 461 85 HOH HOH . I 5 HOH A 62 462 87 HOH HOH . I 5 HOH A 63 463 88 HOH HOH . I 5 HOH A 64 464 89 HOH HOH . I 5 HOH A 65 465 90 HOH HOH . I 5 HOH A 66 466 91 HOH HOH . I 5 HOH A 67 467 92 HOH HOH . I 5 HOH A 68 468 93 HOH HOH . I 5 HOH A 69 469 95 HOH HOH . I 5 HOH A 70 470 96 HOH HOH . I 5 HOH A 71 471 97 HOH HOH . I 5 HOH A 72 472 99 HOH HOH . I 5 HOH A 73 473 100 HOH HOH . I 5 HOH A 74 474 106 HOH HOH . I 5 HOH A 75 475 107 HOH HOH . I 5 HOH A 76 476 108 HOH HOH . I 5 HOH A 77 477 109 HOH HOH . I 5 HOH A 78 478 110 HOH HOH . I 5 HOH A 79 479 113 HOH HOH . I 5 HOH A 80 480 114 HOH HOH . I 5 HOH A 81 481 115 HOH HOH . I 5 HOH A 82 482 116 HOH HOH . I 5 HOH A 83 483 117 HOH HOH . I 5 HOH A 84 484 118 HOH HOH . I 5 HOH A 85 485 119 HOH HOH . I 5 HOH A 86 486 120 HOH HOH . I 5 HOH A 87 487 121 HOH HOH . I 5 HOH A 88 488 122 HOH HOH . I 5 HOH A 89 489 123 HOH HOH . I 5 HOH A 90 490 124 HOH HOH . I 5 HOH A 91 491 125 HOH HOH . I 5 HOH A 92 492 128 HOH HOH . I 5 HOH A 93 493 131 HOH HOH . I 5 HOH A 94 494 133 HOH HOH . I 5 HOH A 95 495 134 HOH HOH . I 5 HOH A 96 496 135 HOH HOH . I 5 HOH A 97 497 136 HOH HOH . I 5 HOH A 98 498 140 HOH HOH . I 5 HOH A 99 499 144 HOH HOH . I 5 HOH A 100 500 145 HOH HOH . I 5 HOH A 101 501 146 HOH HOH . I 5 HOH A 102 502 148 HOH HOH . I 5 HOH A 103 503 149 HOH HOH . I 5 HOH A 104 504 151 HOH HOH . I 5 HOH A 105 505 152 HOH HOH . I 5 HOH A 106 506 154 HOH HOH . I 5 HOH A 107 507 157 HOH HOH . I 5 HOH A 108 508 158 HOH HOH . I 5 HOH A 109 509 159 HOH HOH . I 5 HOH A 110 510 162 HOH HOH . I 5 HOH A 111 511 164 HOH HOH . I 5 HOH A 112 512 165 HOH HOH . I 5 HOH A 113 513 167 HOH HOH . I 5 HOH A 114 514 168 HOH HOH . I 5 HOH A 115 515 169 HOH HOH . I 5 HOH A 116 516 170 HOH HOH . I 5 HOH A 117 517 171 HOH HOH . I 5 HOH A 118 518 172 HOH HOH . I 5 HOH A 119 519 176 HOH HOH . I 5 HOH A 120 520 177 HOH HOH . I 5 HOH A 121 521 178 HOH HOH . I 5 HOH A 122 522 179 HOH HOH . I 5 HOH A 123 523 181 HOH HOH . I 5 HOH A 124 524 182 HOH HOH . I 5 HOH A 125 525 185 HOH HOH . J 5 HOH B 1 401 4 HOH HOH . J 5 HOH B 2 402 6 HOH HOH . J 5 HOH B 3 403 9 HOH HOH . J 5 HOH B 4 404 15 HOH HOH . J 5 HOH B 5 405 18 HOH HOH . J 5 HOH B 6 406 19 HOH HOH . J 5 HOH B 7 407 30 HOH HOH . J 5 HOH B 8 408 34 HOH HOH . J 5 HOH B 9 409 36 HOH HOH . J 5 HOH B 10 410 37 HOH HOH . J 5 HOH B 11 411 44 HOH HOH . J 5 HOH B 12 412 54 HOH HOH . J 5 HOH B 13 413 55 HOH HOH . J 5 HOH B 14 414 56 HOH HOH . J 5 HOH B 15 415 58 HOH HOH . J 5 HOH B 16 416 61 HOH HOH . J 5 HOH B 17 417 62 HOH HOH . J 5 HOH B 18 418 69 HOH HOH . J 5 HOH B 19 419 72 HOH HOH . J 5 HOH B 20 420 73 HOH HOH . J 5 HOH B 21 421 75 HOH HOH . J 5 HOH B 22 422 76 HOH HOH . J 5 HOH B 23 423 81 HOH HOH . J 5 HOH B 24 424 86 HOH HOH . J 5 HOH B 25 425 94 HOH HOH . J 5 HOH B 26 426 98 HOH HOH . J 5 HOH B 27 427 101 HOH HOH . J 5 HOH B 28 428 102 HOH HOH . J 5 HOH B 29 429 103 HOH HOH . J 5 HOH B 30 430 104 HOH HOH . J 5 HOH B 31 431 105 HOH HOH . J 5 HOH B 32 432 111 HOH HOH . J 5 HOH B 33 433 126 HOH HOH . J 5 HOH B 34 434 127 HOH HOH . J 5 HOH B 35 435 129 HOH HOH . J 5 HOH B 36 436 132 HOH HOH . J 5 HOH B 37 437 137 HOH HOH . J 5 HOH B 38 438 138 HOH HOH . J 5 HOH B 39 439 139 HOH HOH . J 5 HOH B 40 440 142 HOH HOH . J 5 HOH B 41 441 143 HOH HOH . J 5 HOH B 42 442 147 HOH HOH . J 5 HOH B 43 443 150 HOH HOH . J 5 HOH B 44 444 153 HOH HOH . J 5 HOH B 45 445 155 HOH HOH . J 5 HOH B 46 446 160 HOH HOH . J 5 HOH B 47 447 161 HOH HOH . J 5 HOH B 48 448 163 HOH HOH . J 5 HOH B 49 449 166 HOH HOH . J 5 HOH B 50 450 173 HOH HOH . J 5 HOH B 51 451 175 HOH HOH . J 5 HOH B 52 452 184 HOH HOH . J 5 HOH B 53 453 186 HOH HOH . J 5 HOH B 54 454 187 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 GSH . . . C 2 12.766 -0.096 21.017 1 28.61 ? N1 GSH 301 A 1 HETATM 2 C CA1 GSH . . . C 2 12.264 -0.29 22.334 1 26.91 ? CA1 GSH 301 A 1 HETATM 3 C C1 GSH . . . C 2 12.165 0.99 23.056 1 23.75 ? C1 GSH 301 A 1 HETATM 4 O O11 GSH . . . C 2 12.852 1.952 22.701 1 22.08 ? O11 GSH 301 A 1 HETATM 5 O O12 GSH . . . C 2 11.311 1.013 23.971 1 24.35 ? O12 GSH 301 A 1 HETATM 6 C CB1 GSH . . . C 2 13.129 -1.277 23.063 1 30.84 ? CB1 GSH 301 A 1 HETATM 7 C CG1 GSH . . . C 2 12.439 -1.801 24.3 1 34 ? CG1 GSH 301 A 1 HETATM 8 C CD1 GSH . . . C 2 13.088 -3.093 24.789 1 37.87 ? CD1 GSH 301 A 1 HETATM 9 O OE1 GSH . . . C 2 13.818 -3.733 24.047 1 41.21 ? OE1 GSH 301 A 1 HETATM 10 N N2 GSH . . . C 2 12.889 -3.386 26.081 1 33.42 ? N2 GSH 301 A 1 HETATM 11 C CA2 GSH . . . C 2 13.579 -4.388 26.839 1 30.56 ? CA2 GSH 301 A 1 HETATM 12 C C2 GSH . . . C 2 12.589 -5.269 27.566 1 31.7 ? C2 GSH 301 A 1 HETATM 13 O O2 GSH . . . C 2 12.838 -5.723 28.694 1 28.54 ? O2 GSH 301 A 1 HETATM 14 C CB2 GSH . . . C 2 14.419 -3.637 27.845 1 38.03 ? CB2 GSH 301 A 1 HETATM 15 S SG2 GSH . . . C 2 15.489 -2.285 27.231 1 45.35 ? SG2 GSH 301 A 1 HETATM 16 N N3 GSH . . . C 2 11.411 -5.416 26.926 1 29.73 ? N3 GSH 301 A 1 HETATM 17 C CA3 GSH . . . C 2 10.276 -6.116 27.438 1 33.01 ? CA3 GSH 301 A 1 HETATM 18 C C3 GSH . . . C 2 10.258 -7.581 27.076 1 38.61 ? C3 GSH 301 A 1 HETATM 19 O O31 GSH . . . C 2 11.267 -8.038 26.512 1 43.84 ? O31 GSH 301 A 1 HETATM 20 O O32 GSH . . . C 2 9.262 -8.293 27.386 1 37 ? O32 GSH 301 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 275 _model_server_stats.encode_time_ms 11 _model_server_stats.element_count 20 #