data_4L7X # _model_server_result.job_id XmnQziiltGWvNligKZbErg _model_server_result.datetime_utc '2024-11-14 15:44:12' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4l7x # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":102}' # _entry.id 4L7X # _exptl.entry_id 4L7X _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4L7X _cell.length_a 40.82 _cell.length_b 40.82 _cell.length_c 80.62 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4L7X _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 B C THR 3 U THR 82 1_555 B N M3L 4 U M3L 83 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale2 B C M3L 4 U M3L 83 1_555 B N GLN 5 U GLN 84 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? metalc ? metalc1 A ND1 HIS 31 A HIS 31 1_555 D ZN ZN . A ZN 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.187 ? metalc ? metalc2 A SG CYS 9 A CYS 9 1_555 D ZN ZN . A ZN 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.298 ? metalc ? metalc3 A SG CYS 34 A CYS 34 1_555 D ZN ZN . A ZN 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.3 ? metalc ? metalc4 A SG CYS 57 A CYS 57 1_555 C ZN ZN . A ZN 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.326 ? metalc ? metalc5 A SG CYS 11 A CYS 11 1_555 D ZN ZN . A ZN 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.329 ? metalc ? metalc6 A SG CYS 26 A CYS 26 1_555 C ZN ZN . A ZN 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.338 ? metalc ? metalc7 A SG CYS 23 A CYS 23 1_555 C ZN ZN . A ZN 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.353 ? metalc ? metalc8 A SG CYS 54 A CYS 54 1_555 C ZN ZN . A ZN 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.356 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4L7X _atom_sites.fract_transf_matrix[1][1] 0.024498 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.024498 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012404 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 ZN A 1 101 1 ZN ZN . D 3 ZN A 1 102 2 ZN ZN . E 4 HOH A 1 201 1 HOH HOH . E 4 HOH A 2 202 2 HOH HOH . E 4 HOH A 3 203 3 HOH HOH . E 4 HOH A 4 204 4 HOH HOH . E 4 HOH A 5 205 5 HOH HOH . E 4 HOH A 6 206 6 HOH HOH . E 4 HOH A 7 207 7 HOH HOH . E 4 HOH A 8 208 8 HOH HOH . E 4 HOH A 9 209 9 HOH HOH . E 4 HOH A 10 210 10 HOH HOH . E 4 HOH A 11 211 11 HOH HOH . E 4 HOH A 12 212 12 HOH HOH . E 4 HOH A 13 213 13 HOH HOH . E 4 HOH A 14 214 14 HOH HOH . E 4 HOH A 15 215 15 HOH HOH . E 4 HOH A 16 216 16 HOH HOH . E 4 HOH A 17 217 17 HOH HOH . E 4 HOH A 18 218 18 HOH HOH . E 4 HOH A 19 219 19 HOH HOH . E 4 HOH A 20 220 20 HOH HOH . E 4 HOH A 21 221 21 HOH HOH . E 4 HOH A 22 222 22 HOH HOH . E 4 HOH A 23 223 23 HOH HOH . E 4 HOH A 24 224 24 HOH HOH . E 4 HOH A 25 225 25 HOH HOH . E 4 HOH A 26 226 26 HOH HOH . E 4 HOH A 27 227 28 HOH HOH . E 4 HOH A 28 228 29 HOH HOH . E 4 HOH A 29 229 30 HOH HOH . E 4 HOH A 30 230 31 HOH HOH . E 4 HOH A 31 231 32 HOH HOH . E 4 HOH A 32 232 33 HOH HOH . E 4 HOH A 33 233 35 HOH HOH . E 4 HOH A 34 234 36 HOH HOH . E 4 HOH A 35 235 37 HOH HOH . E 4 HOH A 36 236 38 HOH HOH . E 4 HOH A 37 237 39 HOH HOH . E 4 HOH A 38 238 40 HOH HOH . E 4 HOH A 39 239 41 HOH HOH . E 4 HOH A 40 240 42 HOH HOH . E 4 HOH A 41 241 43 HOH HOH . E 4 HOH A 42 242 45 HOH HOH . E 4 HOH A 43 243 46 HOH HOH . E 4 HOH A 44 244 47 HOH HOH . E 4 HOH A 45 245 48 HOH HOH . E 4 HOH A 46 246 49 HOH HOH . E 4 HOH A 47 247 51 HOH HOH . E 4 HOH A 48 248 52 HOH HOH . E 4 HOH A 49 249 53 HOH HOH . E 4 HOH A 50 250 56 HOH HOH . E 4 HOH A 51 251 57 HOH HOH . E 4 HOH A 52 252 58 HOH HOH . E 4 HOH A 53 253 59 HOH HOH . E 4 HOH A 54 254 60 HOH HOH . E 4 HOH A 55 255 61 HOH HOH . E 4 HOH A 56 256 63 HOH HOH . E 4 HOH A 57 257 64 HOH HOH . E 4 HOH A 58 258 65 HOH HOH . E 4 HOH A 59 259 66 HOH HOH . E 4 HOH A 60 260 67 HOH HOH . E 4 HOH A 61 261 68 HOH HOH . E 4 HOH A 62 262 69 HOH HOH . E 4 HOH A 63 263 71 HOH HOH . E 4 HOH A 64 264 72 HOH HOH . E 4 HOH A 65 265 73 HOH HOH . E 4 HOH A 66 266 74 HOH HOH . F 4 HOH U 1 101 27 HOH HOH . F 4 HOH U 2 102 34 HOH HOH . F 4 HOH U 3 103 44 HOH HOH . F 4 HOH U 4 104 50 HOH HOH . F 4 HOH U 5 105 54 HOH HOH . F 4 HOH U 6 106 55 HOH HOH . F 4 HOH U 7 107 62 HOH HOH . F 4 HOH U 8 108 70 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 3 _atom_site.Cartn_x 27.269 _atom_site.Cartn_y 2.016 _atom_site.Cartn_z 30.633 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 15.38 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 102 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 48 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 330 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #