data_4L8E # _model_server_result.job_id LYyPuvAMWi-aqf1yL7Ihaw _model_server_result.datetime_utc '2025-02-05 06:00:20' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4l8e # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 4L8E # _exptl.entry_id 4L8E _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 307.323 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLUTATHIONE _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4L8E _cell.length_a 65.331 _cell.length_b 65.331 _cell.length_c 213.919 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4L8E _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 11_455 -x+y-1,y,-z+1/2 -1 0 0 0 1 0 0 0 -1 -65.331 0 106.9595 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N # _chem_comp.formula 'C10 H17 N3 O6 S' _chem_comp.formula_weight 307.323 _chem_comp.id GSH _chem_comp.mon_nstd_flag . _chem_comp.name GLUTATHIONE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 CA1 GSH sing 129 n n N1 HN11 GSH sing 130 n n N1 HN12 GSH sing 131 n n CA1 C1 GSH sing 132 n n CA1 CB1 GSH sing 133 n n CA1 HA1 GSH sing 134 n n C1 O11 GSH doub 135 n n C1 O12 GSH sing 136 n n O12 H12 GSH sing 137 n n CB1 CG1 GSH sing 138 n n CB1 HB12 GSH sing 139 n n CB1 HB13 GSH sing 140 n n CG1 CD1 GSH sing 141 n n CG1 HG12 GSH sing 142 n n CG1 HG13 GSH sing 143 n n CD1 OE1 GSH doub 144 n n CD1 N2 GSH sing 145 n n N2 CA2 GSH sing 146 n n N2 HN2 GSH sing 147 n n CA2 C2 GSH sing 148 n n CA2 CB2 GSH sing 149 n n CA2 HA2 GSH sing 150 n n C2 O2 GSH doub 151 n n C2 N3 GSH sing 152 n n CB2 SG2 GSH sing 153 n n CB2 HB22 GSH sing 154 n n CB2 HB23 GSH sing 155 n n SG2 HSG GSH sing 156 n n N3 CA3 GSH sing 157 n n N3 HN3 GSH sing 158 n n CA3 C3 GSH sing 159 n n CA3 HA31 GSH sing 160 n n CA3 HA32 GSH sing 161 n n C3 O31 GSH doub 162 n n C3 O32 GSH sing 163 n n O32 H32 GSH sing 164 n n # _atom_sites.entry_id 4L8E _atom_sites.fract_transf_matrix[1][1] 0.015307 _atom_sites.fract_transf_matrix[1][2] 0.008837 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017675 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004675 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GSH A 1 301 1 GSH GSH . C 2 GSH A 1 302 2 GSH GSH . D 2 GSH A 1 303 3 GSH GSH . E 3 CL A 1 304 1 CL CL . F 4 MES A 1 305 1 MES MES . G 5 HOH A 1 401 1 HOH HOH . G 5 HOH A 2 402 2 HOH HOH . G 5 HOH A 3 403 3 HOH HOH . G 5 HOH A 4 404 4 HOH HOH . G 5 HOH A 5 405 5 HOH HOH . G 5 HOH A 6 406 6 HOH HOH . G 5 HOH A 7 407 7 HOH HOH . G 5 HOH A 8 408 8 HOH HOH . G 5 HOH A 9 409 9 HOH HOH . G 5 HOH A 10 410 10 HOH HOH . G 5 HOH A 11 411 11 HOH HOH . G 5 HOH A 12 412 12 HOH HOH . G 5 HOH A 13 413 13 HOH HOH . G 5 HOH A 14 414 14 HOH HOH . G 5 HOH A 15 415 15 HOH HOH . G 5 HOH A 16 416 16 HOH HOH . G 5 HOH A 17 417 17 HOH HOH . G 5 HOH A 18 418 18 HOH HOH . G 5 HOH A 19 419 19 HOH HOH . G 5 HOH A 20 420 20 HOH HOH . G 5 HOH A 21 421 21 HOH HOH . G 5 HOH A 22 422 22 HOH HOH . G 5 HOH A 23 423 23 HOH HOH . G 5 HOH A 24 424 24 HOH HOH . G 5 HOH A 25 425 25 HOH HOH . G 5 HOH A 26 426 26 HOH HOH . G 5 HOH A 27 427 27 HOH HOH . G 5 HOH A 28 428 28 HOH HOH . G 5 HOH A 29 429 29 HOH HOH . G 5 HOH A 30 430 30 HOH HOH . G 5 HOH A 31 431 31 HOH HOH . G 5 HOH A 32 432 32 HOH HOH . G 5 HOH A 33 433 33 HOH HOH . G 5 HOH A 34 434 34 HOH HOH . G 5 HOH A 35 435 35 HOH HOH . G 5 HOH A 36 436 36 HOH HOH . G 5 HOH A 37 437 37 HOH HOH . G 5 HOH A 38 438 38 HOH HOH . G 5 HOH A 39 439 39 HOH HOH . G 5 HOH A 40 440 40 HOH HOH . G 5 HOH A 41 441 41 HOH HOH . G 5 HOH A 42 442 42 HOH HOH . G 5 HOH A 43 443 43 HOH HOH . G 5 HOH A 44 444 44 HOH HOH . G 5 HOH A 45 445 45 HOH HOH . G 5 HOH A 46 446 46 HOH HOH . G 5 HOH A 47 447 47 HOH HOH . G 5 HOH A 48 448 48 HOH HOH . G 5 HOH A 49 449 49 HOH HOH . G 5 HOH A 50 450 50 HOH HOH . G 5 HOH A 51 451 51 HOH HOH . G 5 HOH A 52 452 52 HOH HOH . G 5 HOH A 53 453 53 HOH HOH . G 5 HOH A 54 454 54 HOH HOH . G 5 HOH A 55 455 55 HOH HOH . G 5 HOH A 56 456 57 HOH HOH . G 5 HOH A 57 457 58 HOH HOH . G 5 HOH A 58 458 59 HOH HOH . G 5 HOH A 59 459 60 HOH HOH . G 5 HOH A 60 460 61 HOH HOH . G 5 HOH A 61 461 62 HOH HOH . G 5 HOH A 62 462 63 HOH HOH . G 5 HOH A 63 463 64 HOH HOH . G 5 HOH A 64 464 65 HOH HOH . G 5 HOH A 65 465 66 HOH HOH . G 5 HOH A 66 466 67 HOH HOH . G 5 HOH A 67 467 68 HOH HOH . G 5 HOH A 68 468 69 HOH HOH . G 5 HOH A 69 469 70 HOH HOH . G 5 HOH A 70 470 71 HOH HOH . G 5 HOH A 71 471 72 HOH HOH . G 5 HOH A 72 472 73 HOH HOH . G 5 HOH A 73 473 74 HOH HOH . G 5 HOH A 74 474 75 HOH HOH . G 5 HOH A 75 475 77 HOH HOH . G 5 HOH A 76 476 78 HOH HOH . G 5 HOH A 77 477 79 HOH HOH . G 5 HOH A 78 478 80 HOH HOH . G 5 HOH A 79 479 81 HOH HOH . G 5 HOH A 80 480 84 HOH HOH . G 5 HOH A 81 481 85 HOH HOH . G 5 HOH A 82 482 86 HOH HOH . G 5 HOH A 83 483 87 HOH HOH . G 5 HOH A 84 484 88 HOH HOH . G 5 HOH A 85 485 89 HOH HOH . G 5 HOH A 86 486 90 HOH HOH . G 5 HOH A 87 487 91 HOH HOH . G 5 HOH A 88 488 92 HOH HOH . G 5 HOH A 89 489 93 HOH HOH . G 5 HOH A 90 490 94 HOH HOH . G 5 HOH A 91 491 95 HOH HOH . G 5 HOH A 92 492 96 HOH HOH . G 5 HOH A 93 493 97 HOH HOH . G 5 HOH A 94 494 98 HOH HOH . G 5 HOH A 95 495 99 HOH HOH . G 5 HOH A 96 496 101 HOH HOH . G 5 HOH A 97 497 102 HOH HOH . G 5 HOH A 98 498 103 HOH HOH . G 5 HOH A 99 499 104 HOH HOH . G 5 HOH A 100 500 105 HOH HOH . G 5 HOH A 101 501 107 HOH HOH . G 5 HOH A 102 502 108 HOH HOH . G 5 HOH A 103 503 109 HOH HOH . G 5 HOH A 104 504 110 HOH HOH . G 5 HOH A 105 505 111 HOH HOH . G 5 HOH A 106 506 112 HOH HOH . G 5 HOH A 107 507 113 HOH HOH . G 5 HOH A 108 508 114 HOH HOH . G 5 HOH A 109 509 115 HOH HOH . G 5 HOH A 110 510 117 HOH HOH . G 5 HOH A 111 511 118 HOH HOH . G 5 HOH A 112 512 119 HOH HOH . G 5 HOH A 113 513 120 HOH HOH . G 5 HOH A 114 514 121 HOH HOH . G 5 HOH A 115 515 122 HOH HOH . G 5 HOH A 116 516 123 HOH HOH . G 5 HOH A 117 517 124 HOH HOH . G 5 HOH A 118 518 125 HOH HOH . G 5 HOH A 119 519 127 HOH HOH . G 5 HOH A 120 520 129 HOH HOH . G 5 HOH A 121 521 130 HOH HOH . G 5 HOH A 122 522 131 HOH HOH . G 5 HOH A 123 523 132 HOH HOH . G 5 HOH A 124 524 133 HOH HOH . G 5 HOH A 125 525 134 HOH HOH . G 5 HOH A 126 526 135 HOH HOH . G 5 HOH A 127 527 136 HOH HOH . G 5 HOH A 128 528 137 HOH HOH . G 5 HOH A 129 529 138 HOH HOH . G 5 HOH A 130 530 139 HOH HOH . G 5 HOH A 131 531 140 HOH HOH . G 5 HOH A 132 532 142 HOH HOH . G 5 HOH A 133 533 143 HOH HOH . G 5 HOH A 134 534 144 HOH HOH . G 5 HOH A 135 535 145 HOH HOH . G 5 HOH A 136 536 146 HOH HOH . G 5 HOH A 137 537 147 HOH HOH . G 5 HOH A 138 538 149 HOH HOH . G 5 HOH A 139 539 151 HOH HOH . G 5 HOH A 140 540 152 HOH HOH . G 5 HOH A 141 541 153 HOH HOH . G 5 HOH A 142 542 154 HOH HOH . G 5 HOH A 143 543 157 HOH HOH . G 5 HOH A 144 544 158 HOH HOH . G 5 HOH A 145 545 159 HOH HOH . G 5 HOH A 146 546 160 HOH HOH . G 5 HOH A 147 547 162 HOH HOH . G 5 HOH A 148 548 163 HOH HOH . G 5 HOH A 149 549 164 HOH HOH . G 5 HOH A 150 550 166 HOH HOH . G 5 HOH A 151 551 167 HOH HOH . G 5 HOH A 152 552 169 HOH HOH . G 5 HOH A 153 553 170 HOH HOH . G 5 HOH A 154 554 171 HOH HOH . G 5 HOH A 155 555 172 HOH HOH . G 5 HOH A 156 556 173 HOH HOH . G 5 HOH A 157 557 174 HOH HOH . G 5 HOH A 158 558 175 HOH HOH . G 5 HOH A 159 559 176 HOH HOH . G 5 HOH A 160 560 177 HOH HOH . G 5 HOH A 161 561 179 HOH HOH . G 5 HOH A 162 562 180 HOH HOH . G 5 HOH A 163 563 181 HOH HOH . G 5 HOH A 164 564 182 HOH HOH . G 5 HOH A 165 565 183 HOH HOH . G 5 HOH A 166 566 184 HOH HOH . G 5 HOH A 167 567 185 HOH HOH . G 5 HOH A 168 568 186 HOH HOH . G 5 HOH A 169 569 187 HOH HOH . G 5 HOH A 170 570 188 HOH HOH . G 5 HOH A 171 571 189 HOH HOH . G 5 HOH A 172 572 190 HOH HOH . G 5 HOH A 173 573 191 HOH HOH . G 5 HOH A 174 574 194 HOH HOH . G 5 HOH A 175 575 196 HOH HOH . G 5 HOH A 176 576 197 HOH HOH . G 5 HOH A 177 577 200 HOH HOH . G 5 HOH A 178 578 202 HOH HOH . G 5 HOH A 179 579 203 HOH HOH . G 5 HOH A 180 580 205 HOH HOH . G 5 HOH A 181 581 206 HOH HOH . G 5 HOH A 182 582 207 HOH HOH . G 5 HOH A 183 583 208 HOH HOH . G 5 HOH A 184 584 211 HOH HOH . G 5 HOH A 185 585 212 HOH HOH . G 5 HOH A 186 586 213 HOH HOH . G 5 HOH A 187 587 215 HOH HOH . G 5 HOH A 188 588 216 HOH HOH . G 5 HOH A 189 589 217 HOH HOH . G 5 HOH A 190 590 218 HOH HOH . G 5 HOH A 191 591 219 HOH HOH . G 5 HOH A 192 592 220 HOH HOH . G 5 HOH A 193 593 221 HOH HOH . G 5 HOH A 194 594 222 HOH HOH . G 5 HOH A 195 595 223 HOH HOH . G 5 HOH A 196 596 224 HOH HOH . G 5 HOH A 197 597 225 HOH HOH . G 5 HOH A 198 598 226 HOH HOH . G 5 HOH A 199 599 227 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 GSH . . . B 2 -28.244 1.857 43.161 1 25.27 ? N1 GSH 301 A 1 HETATM 2 C CA1 GSH . . . B 2 -29.627 2.046 43.391 1 27.91 ? CA1 GSH 301 A 1 HETATM 3 C C1 GSH . . . B 2 -30.147 0.903 44.218 1 43.39 ? C1 GSH 301 A 1 HETATM 4 O O11 GSH . . . B 2 -29.562 -0.225 44.186 1 37 ? O11 GSH 301 A 1 HETATM 5 O O12 GSH . . . B 2 -31.186 1.065 44.934 1 37.3 ? O12 GSH 301 A 1 HETATM 6 C CB1 GSH . . . B 2 -30.33 2.071 42.089 1 23.03 ? CB1 GSH 301 A 1 HETATM 7 C CG1 GSH . . . B 2 -31.829 2.254 42.221 1 23.1 ? CG1 GSH 301 A 1 HETATM 8 C CD1 GSH . . . B 2 -32.194 3.693 42.525 1 21.86 ? CD1 GSH 301 A 1 HETATM 9 O OE1 GSH . . . B 2 -31.454 4.603 42.223 1 22.69 ? OE1 GSH 301 A 1 HETATM 10 N N2 GSH . . . B 2 -33.451 3.942 43.204 1 21.84 ? N2 GSH 301 A 1 HETATM 11 C CA2 GSH . . . B 2 -33.865 5.27 43.517 1 18.94 ? CA2 GSH 301 A 1 HETATM 12 C C2 GSH . . . B 2 -33.969 5.373 45.031 1 17.37 ? C2 GSH 301 A 1 HETATM 13 O O2 GSH . . . B 2 -34.31 4.427 45.757 1 19.79 ? O2 GSH 301 A 1 HETATM 14 C CB2 GSH . . . B 2 -35.188 5.59 42.925 1 22.49 ? CB2 GSH 301 A 1 HETATM 15 S SG2 GSH . . . B 2 -35.086 5.661 41.13 1 30.91 ? SG2 GSH 301 A 1 HETATM 16 N N3 GSH . . . B 2 -33.631 6.606 45.654 1 17.63 ? N3 GSH 301 A 1 HETATM 17 C CA3 GSH . . . B 2 -33.725 6.694 47.091 1 17.61 ? CA3 GSH 301 A 1 HETATM 18 C C3 GSH . . . B 2 -34.014 8.089 47.477 1 18.65 ? C3 GSH 301 A 1 HETATM 19 O O31 GSH . . . B 2 -34.646 8.835 46.686 1 17.29 ? O31 GSH 301 A 1 HETATM 20 O O32 GSH . . . B 2 -33.609 8.5 48.602 1 17.48 ? O32 GSH 301 A 1 HETATM 21 H HN11 GSH . . . B 2 -27.815 1.752 43.959 1 30.32 ? HN11 GSH 301 A 1 HETATM 22 H HN12 GSH . . . B 2 -27.904 2.587 42.726 1 30.32 ? HN12 GSH 301 A 1 HETATM 23 H HA1 GSH . . . B 2 -29.773 2.89 43.863 1 33.49 ? HA1 GSH 301 A 1 HETATM 24 H HB12 GSH . . . B 2 -30.16 1.221 41.636 1 27.64 ? HB12 GSH 301 A 1 HETATM 25 H HB13 GSH . . . B 2 -29.972 2.789 41.551 1 27.64 ? HB13 GSH 301 A 1 HETATM 26 H HG12 GSH . . . B 2 -32.142 1.69 42.951 1 27.72 ? HG12 GSH 301 A 1 HETATM 27 H HG13 GSH . . . B 2 -32.267 1.98 41.401 1 27.72 ? HG13 GSH 301 A 1 HETATM 28 H HN2 GSH . . . B 2 -33.998 3.231 43.423 1 26.21 ? HN2 GSH 301 A 1 HETATM 29 H HA2 GSH . . . B 2 -33.209 5.895 43.196 1 22.73 ? HA2 GSH 301 A 1 HETATM 30 H HB22 GSH . . . B 2 -35.491 6.456 43.264 1 26.99 ? HB22 GSH 301 A 1 HETATM 31 H HB23 GSH . . . B 2 -35.835 4.898 43.185 1 26.99 ? HB23 GSH 301 A 1 HETATM 32 H HSG GSH . . . B 2 -36.094 6.127 40.692 1 37.09 ? HSG GSH 301 A 1 HETATM 33 H HN3 GSH . . . B 2 -33.372 7.329 45.155 1 21.15 ? HN3 GSH 301 A 1 HETATM 34 H HA31 GSH . . . B 2 -34.44 6.114 47.413 1 21.14 ? HA31 GSH 301 A 1 HETATM 35 H HA32 GSH . . . B 2 -32.881 6.415 47.486 1 21.14 ? HA32 GSH 301 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 14 _model_server_stats.query_time_ms 336 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 35 #