data_4L8H
#
_model_server_result.job_id            gLh7B4vqcbwg9U6Q7Tkbmg 
_model_server_result.datetime_utc      '2025-08-01 22:50:27' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4l8h 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":104}' 
#
_entry.id    4L8H 
#
_exptl.entry_id    4L8H 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              65.409 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'ZINC ION' 
_entity.pdbx_number_of_molecules    6 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            4L8H 
_cell.length_a            75.84 
_cell.length_b            75.84 
_cell.length_c            303.49 
_cell.Z_PDB               24 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4L8H 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        179 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 65 2 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    trimeric 
_pdbx_struct_assembly.oligomeric_count      3 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 D N N 
? 3 E N N 
? 3 F N N 
? 3 G N N 
? 3 H N N 
? 3 I N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OD2 ASP 91 A ASP 91 1_555 I ZN ZN . R ZN 105 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.816 ? 
metalc ? metalc2 J O HOH . A HOH 201 1_555 I ZN ZN . R ZN 105 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.232 ? 
metalc ? metalc3 J O HOH . A HOH 229 1_555 F ZN ZN . R ZN 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.511 ? 
metalc ? metalc4 B OD1 ASP 102 B ASP 102 1_555 D ZN ZN . B ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.988 ? 
metalc ? metalc5 B OE2 GLU 103 B GLU 103 1_555 D ZN ZN . B ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.063 ? 
metalc ? metalc6 B OE1 GLU 103 B GLU 103 1_555 D ZN ZN . B ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.521 ? 
metalc ? metalc7 C OP1 U 6 R U 6 1_555 H ZN ZN . R ZN 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.16 ? 
metalc ? metalc8 C N7 G 7 R G 7 1_555 E ZN ZN . R ZN 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.416 ? 
metalc ? metalc9 C N1 A 11 R A 11 1_555 I ZN ZN . R ZN 105 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.23 ? 
metalc ? metalc10 C N7 G 13 R G 13 1_555 F ZN ZN . R ZN 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.383 ? 
metalc ? metalc11 F ZN ZN . R ZN 102 1_555 L O HOH . R HOH 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.561 ? 
metalc ? metalc12 I ZN ZN . R ZN 105 1_555 L O HOH . R HOH 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.579 ? 
hydrog WATSON-CRICK hydrog1 C N1 A 1 R A 1 1_555 C N3 U 20 R U 20 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog2 C N6 A 1 R A 1 1_555 C O4 U 20 R U 20 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog3 C N3 U 2 R U 2 1_555 C N1 A 19 R A 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog4 C O4 U 2 R U 2 1_555 C N6 A 19 R A 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog5 C N1 G 3 R G 3 1_555 C N3 C 18 R C 18 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog6 C N2 G 3 R G 3 1_555 C O2 C 18 R C 18 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog7 C O6 G 3 R G 3 1_555 C N4 C 18 R C 18 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog 'C-G PAIR' hydrog8 C O2 C 4 R C 4 1_555 C N2 G 17 R G 17 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog9 C N3 U 6 R U 6 1_555 C N1 A 16 R A 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog10 C O4 U 6 R U 6 1_555 C N6 A 16 R A 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog11 C N1 G 7 R G 7 1_555 C N3 C 15 R C 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog12 C N2 G 7 R G 7 1_555 C O2 C 15 R C 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog13 C O6 G 7 R G 7 1_555 C N4 C 15 R C 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog14 C N3 U 8 R U 8 1_555 C N1 A 14 R A 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog15 C O4 U 8 R U 8 1_555 C N6 A 14 R A 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog16 C N3 C 9 R C 9 1_555 C N1 G 13 R G 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog17 C N4 C 9 R C 9 1_555 C O6 G 13 R G 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog18 C O2 C 9 R C 9 1_555 C N2 G 13 R G 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
#
_chem_comp.formula           'Zn 2' 
_chem_comp.formula_weight    65.409 
_chem_comp.id                ZN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'ZINC ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     4L8H 
_atom_sites.fract_transf_matrix[1][1]    0.013186 
_atom_sites.fract_transf_matrix[1][2]    0.007613 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.015225 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.003295 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 3 ZN B 1 201 1 ZN ZN . 
E 3 ZN R 1 101 2 ZN ZN . 
F 3 ZN R 1 102 3 ZN ZN . 
G 3 ZN R 1 103 4 ZN ZN . 
H 3 ZN R 1 104 5 ZN ZN . 
I 3 ZN R 1 105 6 ZN ZN . 
J 4 HOH A 1 201 4 HOH HOH . 
J 4 HOH A 2 202 5 HOH HOH . 
J 4 HOH A 3 203 8 HOH HOH . 
J 4 HOH A 4 204 12 HOH HOH . 
J 4 HOH A 5 205 13 HOH HOH . 
J 4 HOH A 6 206 15 HOH HOH . 
J 4 HOH A 7 207 20 HOH HOH . 
J 4 HOH A 8 208 24 HOH HOH . 
J 4 HOH A 9 209 31 HOH HOH . 
J 4 HOH A 10 210 32 HOH HOH . 
J 4 HOH A 11 211 36 HOH HOH . 
J 4 HOH A 12 212 38 HOH HOH . 
J 4 HOH A 13 213 40 HOH HOH . 
J 4 HOH A 14 214 42 HOH HOH . 
J 4 HOH A 15 215 48 HOH HOH . 
J 4 HOH A 16 216 53 HOH HOH . 
J 4 HOH A 17 217 54 HOH HOH . 
J 4 HOH A 18 218 55 HOH HOH . 
J 4 HOH A 19 219 56 HOH HOH . 
J 4 HOH A 20 220 57 HOH HOH . 
J 4 HOH A 21 221 60 HOH HOH . 
J 4 HOH A 22 222 61 HOH HOH . 
J 4 HOH A 23 223 62 HOH HOH . 
J 4 HOH A 24 224 65 HOH HOH . 
J 4 HOH A 25 225 66 HOH HOH . 
J 4 HOH A 26 226 67 HOH HOH . 
J 4 HOH A 27 227 70 HOH HOH . 
J 4 HOH A 28 228 71 HOH HOH . 
J 4 HOH A 29 229 74 HOH HOH . 
J 4 HOH A 30 230 75 HOH HOH . 
J 4 HOH A 31 231 79 HOH HOH . 
J 4 HOH A 32 232 82 HOH HOH . 
J 4 HOH A 33 233 86 HOH HOH . 
J 4 HOH A 34 234 87 HOH HOH . 
J 4 HOH A 35 235 91 HOH HOH . 
K 4 HOH B 1 301 2 HOH HOH . 
K 4 HOH B 2 302 3 HOH HOH . 
K 4 HOH B 3 303 6 HOH HOH . 
K 4 HOH B 4 304 7 HOH HOH . 
K 4 HOH B 5 305 9 HOH HOH . 
K 4 HOH B 6 306 10 HOH HOH . 
K 4 HOH B 7 307 11 HOH HOH . 
K 4 HOH B 8 308 14 HOH HOH . 
K 4 HOH B 9 309 16 HOH HOH . 
K 4 HOH B 10 310 17 HOH HOH . 
K 4 HOH B 11 311 18 HOH HOH . 
K 4 HOH B 12 312 19 HOH HOH . 
K 4 HOH B 13 313 21 HOH HOH . 
K 4 HOH B 14 314 22 HOH HOH . 
K 4 HOH B 15 315 23 HOH HOH . 
K 4 HOH B 16 316 25 HOH HOH . 
K 4 HOH B 17 317 26 HOH HOH . 
K 4 HOH B 18 318 27 HOH HOH . 
K 4 HOH B 19 319 28 HOH HOH . 
K 4 HOH B 20 320 29 HOH HOH . 
K 4 HOH B 21 321 30 HOH HOH . 
K 4 HOH B 22 322 33 HOH HOH . 
K 4 HOH B 23 323 34 HOH HOH . 
K 4 HOH B 24 324 35 HOH HOH . 
K 4 HOH B 25 325 37 HOH HOH . 
K 4 HOH B 26 326 39 HOH HOH . 
K 4 HOH B 27 327 41 HOH HOH . 
K 4 HOH B 28 328 43 HOH HOH . 
K 4 HOH B 29 329 44 HOH HOH . 
K 4 HOH B 30 330 45 HOH HOH . 
K 4 HOH B 31 331 46 HOH HOH . 
K 4 HOH B 32 332 49 HOH HOH . 
K 4 HOH B 33 333 50 HOH HOH . 
K 4 HOH B 34 334 51 HOH HOH . 
K 4 HOH B 35 335 52 HOH HOH . 
K 4 HOH B 36 336 58 HOH HOH . 
K 4 HOH B 37 337 59 HOH HOH . 
K 4 HOH B 38 338 64 HOH HOH . 
K 4 HOH B 39 339 69 HOH HOH . 
K 4 HOH B 40 340 72 HOH HOH . 
K 4 HOH B 41 341 76 HOH HOH . 
K 4 HOH B 42 342 77 HOH HOH . 
K 4 HOH B 43 343 78 HOH HOH . 
K 4 HOH B 44 344 81 HOH HOH . 
K 4 HOH B 45 345 83 HOH HOH . 
K 4 HOH B 46 346 84 HOH HOH . 
K 4 HOH B 47 347 85 HOH HOH . 
K 4 HOH B 48 348 88 HOH HOH . 
K 4 HOH B 49 349 89 HOH HOH . 
K 4 HOH B 50 350 90 HOH HOH . 
K 4 HOH B 51 351 93 HOH HOH . 
L 4 HOH R 1 201 1 HOH HOH . 
L 4 HOH R 2 202 73 HOH HOH . 
L 4 HOH R 3 203 80 HOH HOH . 
L 4 HOH R 4 204 92 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           ZN 
_atom_site.label_atom_id         ZN 
_atom_site.label_comp_id         ZN 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         H 
_atom_site.label_entity_id       3 
_atom_site.Cartn_x               -2.529 
_atom_site.Cartn_y               -18.302 
_atom_site.Cartn_z               -14.145 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        82.6 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          ZN 
_atom_site.auth_comp_id          ZN 
_atom_site.auth_seq_id           104 
_atom_site.auth_asym_id          R 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           316 
_model_server_stats.encode_time_ms          8 
_model_server_stats.element_count           1 
#