data_4L8M
#
_model_server_result.job_id            LUtrK-oBxB_cGC4I0TVzWg 
_model_server_result.datetime_utc      '2024-10-11 01:28:07' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4l8m 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":403}' 
#
_entry.id    4L8M 
#
_exptl.entry_id    4L8M 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              567.607 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            N-[2-fluoro-5-({9-[2-(morpholin-4-yl)ethoxy]-11-oxo-6,11-dihydrodibenzo[b,e]oxepin-3-yl}amino)phenyl]benzamide 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4L8M 
_cell.length_a            64.616 
_cell.length_b            72.949 
_cell.length_c            76.916 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4L8M 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C33 H30 F N3 O5' 
_chem_comp.formula_weight    567.607 
_chem_comp.id                F46 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              N-[2-fluoro-5-({9-[2-(morpholin-4-yl)ethoxy]-11-oxo-6,11-dihydrodibenzo[b,e]oxepin-3-yl}amino)phenyl]benzamide 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
OAA CBD F46 doub 131 n n 
OAB CBE F46 doub 132 n n 
FAC CBH F46 sing 133 n n 
CAD CAE F46 doub 134 n y 
CAD CAF F46 sing 135 n y 
CAE CAG F46 sing 136 n y 
CAF CAH F46 doub 137 n y 
CAG CBJ F46 doub 138 n y 
CAH CBJ F46 sing 139 n y 
CAI CAK F46 doub 140 n y 
CAI CBF F46 sing 141 n y 
CAJ CAN F46 sing 142 n y 
CAJ CBG F46 doub 143 n y 
CAK CBH F46 sing 144 n y 
CAL CAM F46 doub 145 n y 
CAL CBI F46 sing 146 n y 
CAM CBK F46 sing 147 n y 
CAN CBN F46 doub 148 n y 
CAO CBF F46 doub 149 n y 
CAO CBL F46 sing 150 n y 
CAP CBG F46 sing 151 n y 
CAP CBM F46 doub 152 n y 
CAQ CBI F46 doub 153 n y 
CAQ CBO F46 sing 154 n y 
CAR CAU F46 sing 155 n n 
CAR OBA F46 sing 156 n n 
CAS CAV F46 sing 157 n n 
CAS OBA F46 sing 158 n n 
CAT CAW F46 sing 159 n n 
CAT OBB F46 sing 160 n n 
CAU NBP F46 sing 161 n n 
CAV NBP F46 sing 162 n n 
CAW NBP F46 sing 163 n n 
CAX OBC F46 sing 164 n n 
CAX CBK F46 sing 165 n n 
NAY CBD F46 sing 166 n n 
NAY CBL F46 sing 167 n n 
NAZ CBF F46 sing 168 n n 
NAZ CBG F46 sing 169 n n 
OBB CBI F46 sing 170 n n 
OBC CBM F46 sing 171 n n 
CBD CBJ F46 sing 172 n n 
CBE CBN F46 sing 173 n n 
CBE CBO F46 sing 174 n n 
CBH CBL F46 doub 175 n y 
CBK CBO F46 doub 176 n y 
CBM CBN F46 sing 177 n y 
CAD HAD F46 sing 178 n n 
CAE HAE F46 sing 179 n n 
CAF HAF F46 sing 180 n n 
CAG HAG F46 sing 181 n n 
CAH HAH F46 sing 182 n n 
CAI HAI F46 sing 183 n n 
CAJ HAJ F46 sing 184 n n 
CAK HAK F46 sing 185 n n 
CAL HAL F46 sing 186 n n 
CAM HAM F46 sing 187 n n 
CAN HAN F46 sing 188 n n 
CAO HAO F46 sing 189 n n 
CAP HAP F46 sing 190 n n 
CAQ HAQ F46 sing 191 n n 
CAR HAR F46 sing 192 n n 
CAR HARA F46 sing 193 n n 
CAS HAS F46 sing 194 n n 
CAS HASA F46 sing 195 n n 
CAT HAT F46 sing 196 n n 
CAT HATA F46 sing 197 n n 
CAU HAU F46 sing 198 n n 
CAU HAUA F46 sing 199 n n 
CAV HAV F46 sing 200 n n 
CAV HAVA F46 sing 201 n n 
CAW HAW F46 sing 202 n n 
CAW HAWA F46 sing 203 n n 
CAX HAX F46 sing 204 n n 
CAX HAXA F46 sing 205 n n 
NAY HNAY F46 sing 206 n n 
NAZ HNAZ F46 sing 207 n n 
#
_atom_sites.entry_id                     4L8M 
_atom_sites.fract_transf_matrix[1][1]    0.015476 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.013708 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.013001 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 BOG A 1 401 1000 BOG BOG . 
C 2 BOG A 1 402 1000 BOG BOG . 
D 3 F46 A 1 403 1 F46 DRG . 
E 4 HOH A 1 501 1 HOH HOH . 
E 4 HOH A 2 502 2 HOH HOH . 
E 4 HOH A 3 503 3 HOH HOH . 
E 4 HOH A 4 504 4 HOH HOH . 
E 4 HOH A 5 505 5 HOH HOH . 
E 4 HOH A 6 506 6 HOH HOH . 
E 4 HOH A 7 507 7 HOH HOH . 
E 4 HOH A 8 508 8 HOH HOH . 
E 4 HOH A 9 509 9 HOH HOH . 
E 4 HOH A 10 510 10 HOH HOH . 
E 4 HOH A 11 511 11 HOH HOH . 
E 4 HOH A 12 512 12 HOH HOH . 
E 4 HOH A 13 513 13 HOH HOH . 
E 4 HOH A 14 514 14 HOH HOH . 
E 4 HOH A 15 515 15 HOH HOH . 
E 4 HOH A 16 516 16 HOH HOH . 
E 4 HOH A 17 517 17 HOH HOH . 
E 4 HOH A 18 518 18 HOH HOH . 
E 4 HOH A 19 519 19 HOH HOH . 
E 4 HOH A 20 520 20 HOH HOH . 
E 4 HOH A 21 521 21 HOH HOH . 
E 4 HOH A 22 522 22 HOH HOH . 
E 4 HOH A 23 523 23 HOH HOH . 
E 4 HOH A 24 524 25 HOH HOH . 
E 4 HOH A 25 525 26 HOH HOH . 
E 4 HOH A 26 526 27 HOH HOH . 
E 4 HOH A 27 527 28 HOH HOH . 
E 4 HOH A 28 528 29 HOH HOH . 
E 4 HOH A 29 529 30 HOH HOH . 
E 4 HOH A 30 530 31 HOH HOH . 
E 4 HOH A 31 531 32 HOH HOH . 
E 4 HOH A 32 532 34 HOH HOH . 
E 4 HOH A 33 533 35 HOH HOH . 
E 4 HOH A 34 534 36 HOH HOH . 
E 4 HOH A 35 535 38 HOH HOH . 
E 4 HOH A 36 536 39 HOH HOH . 
E 4 HOH A 37 537 40 HOH HOH . 
E 4 HOH A 38 538 41 HOH HOH . 
E 4 HOH A 39 539 42 HOH HOH . 
E 4 HOH A 40 540 43 HOH HOH . 
E 4 HOH A 41 541 44 HOH HOH . 
E 4 HOH A 42 542 45 HOH HOH . 
E 4 HOH A 43 543 46 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O OAA F46 . . . D 3 -0.36 -1.984 -15.316 1 36.29 ? OAA F46 403 A 1 
HETATM 2 O OAB F46 . . . D 3 -2.263 3.917 -23.132 1 36.92 ? OAB F46 403 A 1 
HETATM 3 F FAC F46 . . . D 3 -4.776 -1.766 -14.909 1 38.31 ? FAC F46 403 A 1 
HETATM 4 C CAD F46 . . . D 3 0.125 -5.579 -11.955 1 34.52 ? CAD F46 403 A 1 
HETATM 5 C CAE F46 . . . D 3 -0.449 -6.069 -13.122 1 35.73 ? CAE F46 403 A 1 
HETATM 6 C CAF F46 . . . D 3 0.277 -4.197 -11.791 1 36.93 ? CAF F46 403 A 1 
HETATM 7 C CAG F46 . . . D 3 -0.843 -5.171 -14.125 1 33.98 ? CAG F46 403 A 1 
HETATM 8 C CAH F46 . . . D 3 -0.134 -3.312 -12.791 1 37 ? CAH F46 403 A 1 
HETATM 9 C CAI F46 . . . D 3 -4.205 -0.61 -18.234 1 32.71 ? CAI F46 403 A 1 
HETATM 10 C CAJ F46 . . . D 3 -2.766 1.172 -20.254 1 37.23 ? CAJ F46 403 A 1 
HETATM 11 C CAK F46 . . . D 3 -4.822 -0.784 -16.992 1 31.77 ? CAK F46 403 A 1 
HETATM 12 C CAL F46 . . . D 3 -1.637 1.861 -27.515 1 42.33 ? CAL F46 403 A 1 
HETATM 13 C CAM F46 . . . D 3 -0.804 1.175 -26.64 1 44.35 ? CAM F46 403 A 1 
HETATM 14 C CAN F46 . . . D 3 -2.642 2.123 -21.276 1 41.15 ? CAN F46 403 A 1 
HETATM 15 C CAO F46 . . . D 3 -2.375 -2.032 -17.526 1 32.58 ? CAO F46 403 A 1 
HETATM 16 C CAP F46 . . . D 3 -1.639 -0.459 -21.651 1 40.63 ? CAP F46 403 A 1 
HETATM 17 C CAQ F46 . . . D 3 -2.616 3.098 -25.665 1 48.52 ? CAQ F46 403 A 1 
HETATM 18 C CAR F46 . . . D 3 -6.277 6.277 -29.113 1 82.72 ? CAR F46 403 A 1 
HETATM 19 C CAS F46 . . . D 3 -5.859 6.233 -31.528 1 85.53 ? CAS F46 403 A 1 
HETATM 20 C CAT F46 . . . D 3 -3.194 3.035 -29.243 1 65.88 ? CAT F46 403 A 1 
HETATM 21 C CAU F46 . . . D 3 -6.098 4.756 -29.158 1 80.14 ? CAU F46 403 A 1 
HETATM 22 C CAV F46 . . . D 3 -5.432 4.758 -31.479 1 80.12 ? CAV F46 403 A 1 
HETATM 23 C CAW F46 . . . D 3 -4.551 3.042 -29.963 1 79.55 ? CAW F46 403 A 1 
HETATM 24 C CAX F46 . . . D 3 -0.013 0.694 -24.525 1 43.27 ? CAX F46 403 A 1 
HETATM 25 N NAY F46 . . . D 3 -2.422 -3.015 -15.337 1 36.43 ? NAY F46 403 A 1 
HETATM 26 N NAZ F46 . . . D 3 -2.289 -1.149 -19.603 1 36.84 ? NAZ F46 403 A 1 
HETATM 27 O OBA F46 . . . D 3 -5.581 6.896 -30.234 1 80.01 ? OBA F46 403 A 1 
HETATM 28 O OBB F46 . . . D 3 -3.348 3.5 -27.881 1 57.85 ? OBB F46 403 A 1 
HETATM 29 O OBC F46 . . . D 3 -0.841 -0.14 -23.723 1 42.2 ? OBC F46 403 A 1 
HETATM 30 C CBD F46 . . . D 3 -1.118 -2.89 -14.95 1 34.49 ? CBD F46 403 A 1 
HETATM 31 C CBE F46 . . . D 3 -1.973 2.771 -23.439 1 42.95 ? CBE F46 403 A 1 
HETATM 32 C CBF F46 . . . D 3 -2.978 -1.232 -18.476 1 34.15 ? CBF F46 403 A 1 
HETATM 33 C CBG F46 . . . D 3 -2.26 -0.121 -20.456 1 36.83 ? CBG F46 403 A 1 
HETATM 34 C CBH F46 . . . D 3 -4.201 -1.598 -16.034 1 37.73 ? CBH F46 403 A 1 
HETATM 35 C CBI F46 . . . D 3 -2.537 2.816 -27.027 1 47.99 ? CBI F46 403 A 1 
HETATM 36 C CBJ F46 . . . D 3 -0.704 -3.796 -13.961 1 34.46 ? CBJ F46 403 A 1 
HETATM 37 C CBK F46 . . . D 3 -0.886 1.468 -25.275 1 42.61 ? CBK F46 403 A 1 
HETATM 38 C CBL F46 . . . D 3 -2.975 -2.217 -16.293 1 35.24 ? CBL F46 403 A 1 
HETATM 39 C CBM F46 . . . D 3 -1.497 0.468 -22.667 1 42.79 ? CBM F46 403 A 1 
HETATM 40 C CBN F46 . . . D 3 -2.002 1.768 -22.479 1 41.68 ? CBN F46 403 A 1 
HETATM 41 C CBO F46 . . . D 3 -1.771 2.428 -24.784 1 44.87 ? CBO F46 403 A 1 
HETATM 42 N NBP F46 . . . D 3 -5.017 4.428 -30.106 1 79.1 ? NBP F46 403 A 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           6 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           295 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           42 
#