data_4L9U # _model_server_result.job_id XsNjOB_ApxuBcpC4t2H9-Q _model_server_result.datetime_utc '2024-11-05 01:16:42' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4l9u # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":801}' # _entry.id 4L9U # _exptl.entry_id 4L9U _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4L9U _cell.length_a 24.878 _cell.length_b 165.047 _cell.length_c 28.319 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4L9U _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 E N N ? 2 F N N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 107 n n C1 C2 GOL sing 108 n n C1 H11 GOL sing 109 n n C1 H12 GOL sing 110 n n O1 HO1 GOL sing 111 n n C2 O2 GOL sing 112 n n C2 C3 GOL sing 113 n n C2 H2 GOL sing 114 n n O2 HO2 GOL sing 115 n n C3 O3 GOL sing 116 n n C3 H31 GOL sing 117 n n C3 H32 GOL sing 118 n n O3 HO3 GOL sing 119 n n # _atom_sites.entry_id 4L9U _atom_sites.fract_transf_matrix[1][1] 0.040196 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006059 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.035312 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 GOL A 1 801 123 GOL GOL . D 3 SO4 B 1 801 115 SO4 SO4 . E 2 GOL B 1 802 121 GOL GOL . F 2 GOL B 1 803 122 GOL GOL . G 4 HOH A 1 901 5 HOH HOH . G 4 HOH A 2 902 6 HOH HOH . G 4 HOH A 3 903 7 HOH HOH . G 4 HOH A 4 904 8 HOH HOH . G 4 HOH A 5 905 13 HOH HOH . G 4 HOH A 6 906 14 HOH HOH . G 4 HOH A 7 907 15 HOH HOH . G 4 HOH A 8 908 17 HOH HOH . G 4 HOH A 9 909 18 HOH HOH . G 4 HOH A 10 910 19 HOH HOH . G 4 HOH A 11 911 20 HOH HOH . G 4 HOH A 12 912 26 HOH HOH . G 4 HOH A 13 913 27 HOH HOH . G 4 HOH A 14 914 28 HOH HOH . G 4 HOH A 15 915 31 HOH HOH . G 4 HOH A 16 916 34 HOH HOH . G 4 HOH A 17 917 35 HOH HOH . G 4 HOH A 18 918 36 HOH HOH . G 4 HOH A 19 919 40 HOH HOH . G 4 HOH A 20 920 41 HOH HOH . G 4 HOH A 21 921 42 HOH HOH . G 4 HOH A 22 922 45 HOH HOH . G 4 HOH A 23 923 46 HOH HOH . G 4 HOH A 24 924 48 HOH HOH . G 4 HOH A 25 925 51 HOH HOH . G 4 HOH A 26 926 55 HOH HOH . G 4 HOH A 27 927 56 HOH HOH . G 4 HOH A 28 928 60 HOH HOH . G 4 HOH A 29 929 61 HOH HOH . G 4 HOH A 30 930 62 HOH HOH . G 4 HOH A 31 931 63 HOH HOH . G 4 HOH A 32 932 65 HOH HOH . G 4 HOH A 33 933 66 HOH HOH . G 4 HOH A 34 934 67 HOH HOH . G 4 HOH A 35 935 68 HOH HOH . G 4 HOH A 36 936 69 HOH HOH . G 4 HOH A 37 937 70 HOH HOH . G 4 HOH A 38 938 77 HOH HOH . G 4 HOH A 39 939 79 HOH HOH . G 4 HOH A 40 940 80 HOH HOH . G 4 HOH A 41 941 81 HOH HOH . G 4 HOH A 42 942 84 HOH HOH . G 4 HOH A 43 943 91 HOH HOH . G 4 HOH A 44 944 92 HOH HOH . G 4 HOH A 45 945 93 HOH HOH . G 4 HOH A 46 946 96 HOH HOH . G 4 HOH A 47 947 97 HOH HOH . G 4 HOH A 48 948 98 HOH HOH . G 4 HOH A 49 949 99 HOH HOH . G 4 HOH A 50 950 100 HOH HOH . G 4 HOH A 51 951 101 HOH HOH . G 4 HOH A 52 952 102 HOH HOH . G 4 HOH A 53 953 109 HOH HOH . G 4 HOH A 54 954 111 HOH HOH . H 4 HOH B 1 901 1 HOH HOH . H 4 HOH B 2 902 11 HOH HOH . H 4 HOH B 3 903 16 HOH HOH . H 4 HOH B 4 904 23 HOH HOH . H 4 HOH B 5 905 24 HOH HOH . H 4 HOH B 6 906 25 HOH HOH . H 4 HOH B 7 907 32 HOH HOH . H 4 HOH B 8 908 33 HOH HOH . H 4 HOH B 9 909 53 HOH HOH . H 4 HOH B 10 910 58 HOH HOH . H 4 HOH B 11 911 72 HOH HOH . H 4 HOH B 12 912 73 HOH HOH . H 4 HOH B 13 913 75 HOH HOH . H 4 HOH B 14 914 85 HOH HOH . H 4 HOH B 15 915 90 HOH HOH . H 4 HOH B 16 916 104 HOH HOH . H 4 HOH B 17 917 106 HOH HOH . H 4 HOH B 18 918 108 HOH HOH . H 4 HOH B 19 919 112 HOH HOH . H 4 HOH B 20 920 113 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . C 2 -16.067 0.022 -6.398 1 40.54 ? C1 GOL 801 A 1 HETATM 2 O O1 GOL . . . C 2 -16.735 0.063 -7.64 1 46.49 ? O1 GOL 801 A 1 HETATM 3 C C2 GOL . . . C 2 -17.02 0.545 -5.338 1 38.31 ? C2 GOL 801 A 1 HETATM 4 O O2 GOL . . . C 2 -18.324 0.201 -5.737 1 48.97 ? O2 GOL 801 A 1 HETATM 5 C C3 GOL . . . C 2 -16.786 -0.098 -3.978 1 45.08 ? C3 GOL 801 A 1 HETATM 6 O O3 GOL . . . C 2 -15.964 0.719 -3.182 1 51.01 ? O3 GOL 801 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 301 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 6 #