data_4LAE # _model_server_result.job_id P5sbpsaOVYiNY3SyPBl63g _model_server_result.datetime_utc '2024-11-29 13:58:03' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4lae # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":202}' # _entry.id 4LAE # _exptl.entry_id 4LAE _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 387.461 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 7-[5,6-dimethyl-2-(1,3-thiazol-2-yl)-1H-benzimidazol-1-yl]quinazoline-2,4-diamine _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4LAE _cell.length_a 79.36 _cell.length_b 79.36 _cell.length_c 107.104 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4LAE _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C20 H17 N7 S' _chem_comp.formula_weight 387.461 _chem_comp.id 1VM _chem_comp.mon_nstd_flag . _chem_comp.name 7-[5,6-dimethyl-2-(1,3-thiazol-2-yl)-1H-benzimidazol-1-yl]quinazoline-2,4-diamine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C27 S28 1VM sing 1 n y C27 C26 1VM doub 2 n y S28 C24 1VM sing 3 n y C26 N25 1VM sing 4 n y C24 N25 1VM doub 5 n y C24 C17 1VM sing 6 n n N16 C17 1VM doub 7 n y N16 C15 1VM sing 8 n y C17 N13 1VM sing 9 n y C15 C21 1VM doub 10 n y C15 C14 1VM sing 11 n y C21 C20 1VM sing 12 n y N13 C14 1VM sing 13 n y N13 C9 1VM sing 14 n n C14 C18 1VM doub 15 n y C10 C9 1VM doub 16 n y C10 C5 1VM sing 17 n y C9 C8 1VM sing 18 n y C20 C23 1VM sing 19 n n C20 C19 1VM doub 20 n y N4 C5 1VM doub 21 n y N4 C3 1VM sing 22 n y C5 C6 1VM sing 23 n y C8 C7 1VM doub 24 n y C18 C19 1VM sing 25 n y N12 C3 1VM sing 26 n n C3 N2 1VM doub 27 n y C19 C22 1VM sing 28 n n C6 C7 1VM sing 29 n y C6 C1 1VM doub 30 n y N2 C1 1VM sing 31 n y C1 N11 1VM sing 32 n n N11 H1 1VM sing 33 n n N11 H2 1VM sing 34 n n N12 H3 1VM sing 35 n n N12 H4 1VM sing 36 n n C7 H5 1VM sing 37 n n C8 H6 1VM sing 38 n n C10 H7 1VM sing 39 n n C18 H8 1VM sing 40 n n C22 H9 1VM sing 41 n n C22 H10 1VM sing 42 n n C22 H11 1VM sing 43 n n C23 H12 1VM sing 44 n n C23 H13 1VM sing 45 n n C23 H14 1VM sing 46 n n C21 H15 1VM sing 47 n n C26 H16 1VM sing 48 n n C27 H17 1VM sing 49 n n # _atom_sites.entry_id 4LAE _atom_sites.fract_transf_matrix[1][1] 0.012601 _atom_sites.fract_transf_matrix[1][2] 0.007275 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01455 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009337 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NAP X 1 201 160 NAP NAP . C 3 1VM X 1 202 159 1VM 005 . D 4 HOH X 1 301 2 HOH HOH . D 4 HOH X 2 302 3 HOH HOH . D 4 HOH X 3 303 4 HOH HOH . D 4 HOH X 4 304 5 HOH HOH . D 4 HOH X 5 305 7 HOH HOH . D 4 HOH X 6 306 8 HOH HOH . D 4 HOH X 7 307 9 HOH HOH . D 4 HOH X 8 308 10 HOH HOH . D 4 HOH X 9 309 11 HOH HOH . D 4 HOH X 10 310 12 HOH HOH . D 4 HOH X 11 311 13 HOH HOH . D 4 HOH X 12 312 14 HOH HOH . D 4 HOH X 13 313 15 HOH HOH . D 4 HOH X 14 314 16 HOH HOH . D 4 HOH X 15 315 17 HOH HOH . D 4 HOH X 16 316 18 HOH HOH . D 4 HOH X 17 317 19 HOH HOH . D 4 HOH X 18 318 20 HOH HOH . D 4 HOH X 19 319 22 HOH HOH . D 4 HOH X 20 320 23 HOH HOH . D 4 HOH X 21 321 24 HOH HOH . D 4 HOH X 22 322 25 HOH HOH . D 4 HOH X 23 323 26 HOH HOH . D 4 HOH X 24 324 27 HOH HOH . D 4 HOH X 25 325 28 HOH HOH . D 4 HOH X 26 326 29 HOH HOH . D 4 HOH X 27 327 30 HOH HOH . D 4 HOH X 28 328 31 HOH HOH . D 4 HOH X 29 329 32 HOH HOH . D 4 HOH X 30 330 33 HOH HOH . D 4 HOH X 31 331 34 HOH HOH . D 4 HOH X 32 332 35 HOH HOH . D 4 HOH X 33 333 37 HOH HOH . D 4 HOH X 34 334 38 HOH HOH . D 4 HOH X 35 335 39 HOH HOH . D 4 HOH X 36 336 40 HOH HOH . D 4 HOH X 37 337 41 HOH HOH . D 4 HOH X 38 338 42 HOH HOH . D 4 HOH X 39 339 43 HOH HOH . D 4 HOH X 40 340 44 HOH HOH . D 4 HOH X 41 341 45 HOH HOH . D 4 HOH X 42 342 46 HOH HOH . D 4 HOH X 43 343 47 HOH HOH . D 4 HOH X 44 344 48 HOH HOH . D 4 HOH X 45 345 49 HOH HOH . D 4 HOH X 46 346 50 HOH HOH . D 4 HOH X 47 347 51 HOH HOH . D 4 HOH X 48 348 52 HOH HOH . D 4 HOH X 49 349 55 HOH HOH . D 4 HOH X 50 350 56 HOH HOH . D 4 HOH X 51 351 57 HOH HOH . D 4 HOH X 52 352 58 HOH HOH . D 4 HOH X 53 353 59 HOH HOH . D 4 HOH X 54 354 63 HOH HOH . D 4 HOH X 55 355 64 HOH HOH . D 4 HOH X 56 356 65 HOH HOH . D 4 HOH X 57 357 67 HOH HOH . D 4 HOH X 58 358 68 HOH HOH . D 4 HOH X 59 359 69 HOH HOH . D 4 HOH X 60 360 70 HOH HOH . D 4 HOH X 61 361 71 HOH HOH . D 4 HOH X 62 362 72 HOH HOH . D 4 HOH X 63 363 73 HOH HOH . D 4 HOH X 64 364 75 HOH HOH . D 4 HOH X 65 365 76 HOH HOH . D 4 HOH X 66 366 77 HOH HOH . D 4 HOH X 67 367 78 HOH HOH . D 4 HOH X 68 368 79 HOH HOH . D 4 HOH X 69 369 82 HOH HOH . D 4 HOH X 70 370 84 HOH HOH . D 4 HOH X 71 371 86 HOH HOH . D 4 HOH X 72 372 87 HOH HOH . D 4 HOH X 73 373 88 HOH HOH . D 4 HOH X 74 374 90 HOH HOH . D 4 HOH X 75 375 92 HOH HOH . D 4 HOH X 76 376 95 HOH HOH . D 4 HOH X 77 377 97 HOH HOH . D 4 HOH X 78 378 100 HOH HOH . D 4 HOH X 79 379 101 HOH HOH . D 4 HOH X 80 380 102 HOH HOH . D 4 HOH X 81 381 103 HOH HOH . D 4 HOH X 82 382 107 HOH HOH . D 4 HOH X 83 383 109 HOH HOH . D 4 HOH X 84 384 112 HOH HOH . D 4 HOH X 85 385 113 HOH HOH . D 4 HOH X 86 386 114 HOH HOH . D 4 HOH X 87 387 115 HOH HOH . D 4 HOH X 88 388 116 HOH HOH . D 4 HOH X 89 389 118 HOH HOH . D 4 HOH X 90 390 119 HOH HOH . D 4 HOH X 91 391 120 HOH HOH . D 4 HOH X 92 392 121 HOH HOH . D 4 HOH X 93 393 126 HOH HOH . D 4 HOH X 94 394 128 HOH HOH . D 4 HOH X 95 395 129 HOH HOH . D 4 HOH X 96 396 130 HOH HOH . D 4 HOH X 97 397 131 HOH HOH . D 4 HOH X 98 398 132 HOH HOH . D 4 HOH X 99 399 134 HOH HOH . D 4 HOH X 100 400 135 HOH HOH . D 4 HOH X 101 401 138 HOH HOH . D 4 HOH X 102 402 139 HOH HOH . D 4 HOH X 103 403 142 HOH HOH . D 4 HOH X 104 404 144 HOH HOH . D 4 HOH X 105 405 145 HOH HOH . D 4 HOH X 106 406 147 HOH HOH . D 4 HOH X 107 407 148 HOH HOH . D 4 HOH X 108 408 149 HOH HOH . D 4 HOH X 109 409 152 HOH HOH . D 4 HOH X 110 410 153 HOH HOH . D 4 HOH X 111 411 154 HOH HOH . D 4 HOH X 112 412 155 HOH HOH . D 4 HOH X 113 413 156 HOH HOH . D 4 HOH X 114 414 157 HOH HOH . D 4 HOH X 115 415 158 HOH HOH . D 4 HOH X 116 416 159 HOH HOH . D 4 HOH X 117 417 160 HOH HOH . D 4 HOH X 118 418 161 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N11 1VM . . . C 3 -2.884 28.492 -3.038 1 20.15 ? N11 1VM 202 X 1 HETATM 2 C C1 1VM . . . C 3 -4.047 28.625 -3.703 1 20.66 ? C1 1VM 202 X 1 HETATM 3 N N2 1VM . . . C 3 -4.931 27.602 -3.779 1 19.94 ? N2 1VM 202 X 1 HETATM 4 C C6 1VM . . . C 3 -4.394 29.904 -4.379 1 20.44 ? C6 1VM 202 X 1 HETATM 5 C C5 1VM . . . C 3 -5.684 29.962 -5.091 1 20.44 ? C5 1VM 202 X 1 HETATM 6 N N4 1VM . . . C 3 -6.464 28.849 -5.103 1 20.58 ? N4 1VM 202 X 1 HETATM 7 C C3 1VM . . . C 3 -6.102 27.705 -4.461 1 20.4 ? C3 1VM 202 X 1 HETATM 8 N N12 1VM . . . C 3 -6.948 26.636 -4.487 1 20.5 ? N12 1VM 202 X 1 HETATM 9 C C7 1VM . . . C 3 -3.571 31.02 -4.362 1 20.81 ? C7 1VM 202 X 1 HETATM 10 C C8 1VM . . . C 3 -4 32.175 -5.026 1 20.54 ? C8 1VM 202 X 1 HETATM 11 C C9 1VM . . . C 3 -5.208 32.288 -5.729 1 21.74 ? C9 1VM 202 X 1 HETATM 12 C C10 1VM . . . C 3 -6.044 31.151 -5.733 1 20.64 ? C10 1VM 202 X 1 HETATM 13 N N13 1VM . . . C 3 -5.56 33.46 -6.286 1 22.01 ? N13 1VM 202 X 1 HETATM 14 C C14 1VM . . . C 3 -6.56 34.176 -5.742 1 23.45 ? C14 1VM 202 X 1 HETATM 15 C C18 1VM . . . C 3 -7.474 33.985 -4.696 1 23.63 ? C18 1VM 202 X 1 HETATM 16 C C19 1VM . . . C 3 -8.44 34.961 -4.433 1 23.79 ? C19 1VM 202 X 1 HETATM 17 C C22 1VM . . . C 3 -9.424 34.749 -3.303 1 23.65 ? C22 1VM 202 X 1 HETATM 18 C C20 1VM . . . C 3 -8.493 36.205 -5.263 1 23.76 ? C20 1VM 202 X 1 HETATM 19 C C23 1VM . . . C 3 -9.525 37.277 -5.002 1 23.48 ? C23 1VM 202 X 1 HETATM 20 C C21 1VM . . . C 3 -7.58 36.389 -6.306 1 23.97 ? C21 1VM 202 X 1 HETATM 21 C C15 1VM . . . C 3 -6.614 35.418 -6.575 1 23.85 ? C15 1VM 202 X 1 HETATM 22 N N16 1VM . . . C 3 -5.621 35.332 -7.506 1 23.43 ? N16 1VM 202 X 1 HETATM 23 C C17 1VM . . . C 3 -5.003 34.15 -7.28 1 23.25 ? C17 1VM 202 X 1 HETATM 24 C C24 1VM . . . C 3 -3.844 33.725 -8.108 1 23.4 ? C24 1VM 202 X 1 HETATM 25 N N25 1VM . . . C 3 -3.27 32.509 -8.078 1 21.89 ? N25 1VM 202 X 1 HETATM 26 C C26 1VM . . . C 3 -2.209 32.445 -8.948 1 22.53 ? C26 1VM 202 X 1 HETATM 27 C C27 1VM . . . C 3 -1.907 33.608 -9.662 1 22.76 ? C27 1VM 202 X 1 HETATM 28 S S28 1VM . . . C 3 -3.055 34.812 -9.189 1 23.3 ? S28 1VM 202 X 1 # _model_server_stats.io_time_ms 23 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 280 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 28 #