data_4LBA
#
_model_server_result.job_id            XVrGbfxLa7auoaUeMT2w9A 
_model_server_result.datetime_utc      '2024-10-28 02:28:02' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4lba 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":203}' 
#
_entry.id    4LBA 
#
_exptl.entry_id    4LBA 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    6 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            4LBA 
_cell.length_a            126.923 
_cell.length_b            126.923 
_cell.length_c            39.352 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4LBA 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        172 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 64' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,E,F,K 1 1 
B,G,H,I,J,L 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 D N N 
? 3 E N N 
? 3 F N N 
? 3 H N N 
? 3 I N N 
? 3 J N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C VAL 18 A VAL 48 1_555 A N MSE 19 A MSE 49 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? 
covale ? covale2 A C MSE 19 A MSE 49 1_555 A N PRO 20 A PRO 50 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.342 ? 
covale ? covale3 A C LYS 62 A LYS 92 1_555 A N MSE 63 A MSE 93 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? 
covale ? covale4 A C MSE 63 A MSE 93 1_555 A N ASP 64 A ASP 94 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? 
covale ? covale5 B C VAL 18 B VAL 48 1_555 B N MSE 19 B MSE 49 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? 
covale ? covale6 B C MSE 19 B MSE 49 1_555 B N PRO 20 B PRO 50 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.356 ? 
covale ? covale7 B C LYS 62 B LYS 92 1_555 B N MSE 63 B MSE 93 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.316 ? 
covale ? covale8 B C MSE 63 B MSE 93 1_555 B N ASP 64 B ASP 94 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
_atom_sites.entry_id                     4LBA 
_atom_sites.fract_transf_matrix[1][1]    0.007879 
_atom_sites.fract_transf_matrix[1][2]    0.004549 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009098 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.025412 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 1PE A 1 201 201 1PE 1PE . 
D 3 EDO A 1 202 202 EDO EDO . 
E 3 EDO A 1 203 204 EDO EDO . 
F 3 EDO A 1 204 207 EDO EDO . 
G 2 1PE B 1 201 200 1PE 1PE . 
H 3 EDO B 1 202 203 EDO EDO . 
I 3 EDO B 1 203 205 EDO EDO . 
J 3 EDO B 1 204 206 EDO EDO . 
K 4 HOH A 1 301 213 HOH HOH . 
K 4 HOH A 2 302 214 HOH HOH . 
K 4 HOH A 3 303 216 HOH HOH . 
K 4 HOH A 4 304 217 HOH HOH . 
K 4 HOH A 5 305 221 HOH HOH . 
K 4 HOH A 6 306 223 HOH HOH . 
K 4 HOH A 7 307 226 HOH HOH . 
K 4 HOH A 8 308 227 HOH HOH . 
K 4 HOH A 9 309 231 HOH HOH . 
K 4 HOH A 10 310 233 HOH HOH . 
K 4 HOH A 11 311 234 HOH HOH . 
K 4 HOH A 12 312 238 HOH HOH . 
K 4 HOH A 13 313 239 HOH HOH . 
K 4 HOH A 14 314 242 HOH HOH . 
K 4 HOH A 15 315 243 HOH HOH . 
K 4 HOH A 16 316 244 HOH HOH . 
K 4 HOH A 17 317 246 HOH HOH . 
K 4 HOH A 18 318 247 HOH HOH . 
K 4 HOH A 19 319 250 HOH HOH . 
K 4 HOH A 20 320 252 HOH HOH . 
K 4 HOH A 21 321 253 HOH HOH . 
K 4 HOH A 22 322 257 HOH HOH . 
K 4 HOH A 23 323 259 HOH HOH . 
K 4 HOH A 24 324 260 HOH HOH . 
K 4 HOH A 25 325 262 HOH HOH . 
K 4 HOH A 26 326 263 HOH HOH . 
K 4 HOH A 27 327 265 HOH HOH . 
K 4 HOH A 28 328 266 HOH HOH . 
K 4 HOH A 29 329 270 HOH HOH . 
K 4 HOH A 30 330 271 HOH HOH . 
K 4 HOH A 31 331 274 HOH HOH . 
K 4 HOH A 32 332 278 HOH HOH . 
K 4 HOH A 33 333 279 HOH HOH . 
K 4 HOH A 34 334 280 HOH HOH . 
K 4 HOH A 35 335 281 HOH HOH . 
K 4 HOH A 36 336 283 HOH HOH . 
K 4 HOH A 37 337 284 HOH HOH . 
K 4 HOH A 38 338 286 HOH HOH . 
K 4 HOH A 39 339 287 HOH HOH . 
K 4 HOH A 40 340 288 HOH HOH . 
K 4 HOH A 41 341 293 HOH HOH . 
K 4 HOH A 42 342 294 HOH HOH . 
K 4 HOH A 43 343 296 HOH HOH . 
K 4 HOH A 44 344 303 HOH HOH . 
K 4 HOH A 45 345 304 HOH HOH . 
K 4 HOH A 46 346 307 HOH HOH . 
K 4 HOH A 47 347 310 HOH HOH . 
K 4 HOH A 48 348 311 HOH HOH . 
K 4 HOH A 49 349 312 HOH HOH . 
K 4 HOH A 50 350 315 HOH HOH . 
K 4 HOH A 51 351 316 HOH HOH . 
K 4 HOH A 52 352 317 HOH HOH . 
K 4 HOH A 53 353 320 HOH HOH . 
K 4 HOH A 54 354 321 HOH HOH . 
K 4 HOH A 55 355 322 HOH HOH . 
K 4 HOH A 56 356 323 HOH HOH . 
K 4 HOH A 57 357 325 HOH HOH . 
K 4 HOH A 58 358 327 HOH HOH . 
K 4 HOH A 59 359 328 HOH HOH . 
K 4 HOH A 60 360 329 HOH HOH . 
K 4 HOH A 61 361 332 HOH HOH . 
K 4 HOH A 62 362 335 HOH HOH . 
K 4 HOH A 63 363 338 HOH HOH . 
K 4 HOH A 64 364 340 HOH HOH . 
K 4 HOH A 65 365 343 HOH HOH . 
K 4 HOH A 66 366 344 HOH HOH . 
K 4 HOH A 67 367 348 HOH HOH . 
K 4 HOH A 68 368 349 HOH HOH . 
K 4 HOH A 69 369 350 HOH HOH . 
K 4 HOH A 70 370 351 HOH HOH . 
K 4 HOH A 71 371 352 HOH HOH . 
K 4 HOH A 72 372 353 HOH HOH . 
K 4 HOH A 73 373 354 HOH HOH . 
K 4 HOH A 74 374 355 HOH HOH . 
K 4 HOH A 75 375 356 HOH HOH . 
K 4 HOH A 76 376 357 HOH HOH . 
K 4 HOH A 77 377 358 HOH HOH . 
K 4 HOH A 78 378 363 HOH HOH . 
K 4 HOH A 79 379 365 HOH HOH . 
K 4 HOH A 80 380 367 HOH HOH . 
K 4 HOH A 81 381 371 HOH HOH . 
K 4 HOH A 82 382 375 HOH HOH . 
K 4 HOH A 83 383 376 HOH HOH . 
K 4 HOH A 84 384 377 HOH HOH . 
K 4 HOH A 85 385 378 HOH HOH . 
K 4 HOH A 86 386 381 HOH HOH . 
K 4 HOH A 87 387 384 HOH HOH . 
K 4 HOH A 88 388 385 HOH HOH . 
K 4 HOH A 89 389 387 HOH HOH . 
K 4 HOH A 90 390 388 HOH HOH . 
K 4 HOH A 91 391 389 HOH HOH . 
K 4 HOH A 92 392 390 HOH HOH . 
K 4 HOH A 93 393 391 HOH HOH . 
K 4 HOH A 94 394 392 HOH HOH . 
K 4 HOH A 95 395 393 HOH HOH . 
K 4 HOH A 96 396 397 HOH HOH . 
K 4 HOH A 97 397 398 HOH HOH . 
K 4 HOH A 98 398 408 HOH HOH . 
K 4 HOH A 99 399 414 HOH HOH . 
K 4 HOH A 100 400 415 HOH HOH . 
K 4 HOH A 101 401 416 HOH HOH . 
K 4 HOH A 102 402 417 HOH HOH . 
K 4 HOH A 103 403 419 HOH HOH . 
K 4 HOH A 104 404 421 HOH HOH . 
K 4 HOH A 105 405 422 HOH HOH . 
K 4 HOH A 106 406 425 HOH HOH . 
K 4 HOH A 107 407 428 HOH HOH . 
K 4 HOH A 108 408 429 HOH HOH . 
K 4 HOH A 109 409 430 HOH HOH . 
K 4 HOH A 110 410 432 HOH HOH . 
K 4 HOH A 111 411 433 HOH HOH . 
K 4 HOH A 112 412 434 HOH HOH . 
K 4 HOH A 113 413 444 HOH HOH . 
K 4 HOH A 114 414 447 HOH HOH . 
K 4 HOH A 115 415 448 HOH HOH . 
K 4 HOH A 116 416 452 HOH HOH . 
L 4 HOH B 1 301 208 HOH HOH . 
L 4 HOH B 2 302 209 HOH HOH . 
L 4 HOH B 3 303 210 HOH HOH . 
L 4 HOH B 4 304 211 HOH HOH . 
L 4 HOH B 5 305 212 HOH HOH . 
L 4 HOH B 6 306 215 HOH HOH . 
L 4 HOH B 7 307 218 HOH HOH . 
L 4 HOH B 8 308 219 HOH HOH . 
L 4 HOH B 9 309 220 HOH HOH . 
L 4 HOH B 10 310 222 HOH HOH . 
L 4 HOH B 11 311 224 HOH HOH . 
L 4 HOH B 12 312 225 HOH HOH . 
L 4 HOH B 13 313 228 HOH HOH . 
L 4 HOH B 14 314 229 HOH HOH . 
L 4 HOH B 15 315 230 HOH HOH . 
L 4 HOH B 16 316 232 HOH HOH . 
L 4 HOH B 17 317 235 HOH HOH . 
L 4 HOH B 18 318 236 HOH HOH . 
L 4 HOH B 19 319 237 HOH HOH . 
L 4 HOH B 20 320 240 HOH HOH . 
L 4 HOH B 21 321 241 HOH HOH . 
L 4 HOH B 22 322 245 HOH HOH . 
L 4 HOH B 23 323 248 HOH HOH . 
L 4 HOH B 24 324 249 HOH HOH . 
L 4 HOH B 25 325 251 HOH HOH . 
L 4 HOH B 26 326 254 HOH HOH . 
L 4 HOH B 27 327 255 HOH HOH . 
L 4 HOH B 28 328 256 HOH HOH . 
L 4 HOH B 29 329 258 HOH HOH . 
L 4 HOH B 30 330 261 HOH HOH . 
L 4 HOH B 31 331 264 HOH HOH . 
L 4 HOH B 32 332 267 HOH HOH . 
L 4 HOH B 33 333 268 HOH HOH . 
L 4 HOH B 34 334 269 HOH HOH . 
L 4 HOH B 35 335 272 HOH HOH . 
L 4 HOH B 36 336 273 HOH HOH . 
L 4 HOH B 37 337 275 HOH HOH . 
L 4 HOH B 38 338 276 HOH HOH . 
L 4 HOH B 39 339 277 HOH HOH . 
L 4 HOH B 40 340 282 HOH HOH . 
L 4 HOH B 41 341 285 HOH HOH . 
L 4 HOH B 42 342 289 HOH HOH . 
L 4 HOH B 43 343 290 HOH HOH . 
L 4 HOH B 44 344 291 HOH HOH . 
L 4 HOH B 45 345 292 HOH HOH . 
L 4 HOH B 46 346 295 HOH HOH . 
L 4 HOH B 47 347 297 HOH HOH . 
L 4 HOH B 48 348 298 HOH HOH . 
L 4 HOH B 49 349 299 HOH HOH . 
L 4 HOH B 50 350 300 HOH HOH . 
L 4 HOH B 51 351 301 HOH HOH . 
L 4 HOH B 52 352 302 HOH HOH . 
L 4 HOH B 53 353 305 HOH HOH . 
L 4 HOH B 54 354 306 HOH HOH . 
L 4 HOH B 55 355 308 HOH HOH . 
L 4 HOH B 56 356 309 HOH HOH . 
L 4 HOH B 57 357 313 HOH HOH . 
L 4 HOH B 58 358 314 HOH HOH . 
L 4 HOH B 59 359 318 HOH HOH . 
L 4 HOH B 60 360 319 HOH HOH . 
L 4 HOH B 61 361 324 HOH HOH . 
L 4 HOH B 62 362 326 HOH HOH . 
L 4 HOH B 63 363 330 HOH HOH . 
L 4 HOH B 64 364 331 HOH HOH . 
L 4 HOH B 65 365 333 HOH HOH . 
L 4 HOH B 66 366 334 HOH HOH . 
L 4 HOH B 67 367 336 HOH HOH . 
L 4 HOH B 68 368 337 HOH HOH . 
L 4 HOH B 69 369 339 HOH HOH . 
L 4 HOH B 70 370 341 HOH HOH . 
L 4 HOH B 71 371 342 HOH HOH . 
L 4 HOH B 72 372 345 HOH HOH . 
L 4 HOH B 73 373 346 HOH HOH . 
L 4 HOH B 74 374 347 HOH HOH . 
L 4 HOH B 75 375 359 HOH HOH . 
L 4 HOH B 76 376 360 HOH HOH . 
L 4 HOH B 77 377 361 HOH HOH . 
L 4 HOH B 78 378 362 HOH HOH . 
L 4 HOH B 79 379 364 HOH HOH . 
L 4 HOH B 80 380 366 HOH HOH . 
L 4 HOH B 81 381 368 HOH HOH . 
L 4 HOH B 82 382 369 HOH HOH . 
L 4 HOH B 83 383 370 HOH HOH . 
L 4 HOH B 84 384 372 HOH HOH . 
L 4 HOH B 85 385 373 HOH HOH . 
L 4 HOH B 86 386 374 HOH HOH . 
L 4 HOH B 87 387 379 HOH HOH . 
L 4 HOH B 88 388 380 HOH HOH . 
L 4 HOH B 89 389 382 HOH HOH . 
L 4 HOH B 90 390 383 HOH HOH . 
L 4 HOH B 91 391 386 HOH HOH . 
L 4 HOH B 92 392 394 HOH HOH . 
L 4 HOH B 93 393 395 HOH HOH . 
L 4 HOH B 94 394 396 HOH HOH . 
L 4 HOH B 95 395 399 HOH HOH . 
L 4 HOH B 96 396 400 HOH HOH . 
L 4 HOH B 97 397 401 HOH HOH . 
L 4 HOH B 98 398 402 HOH HOH . 
L 4 HOH B 99 399 403 HOH HOH . 
L 4 HOH B 100 400 404 HOH HOH . 
L 4 HOH B 101 401 405 HOH HOH . 
L 4 HOH B 102 402 406 HOH HOH . 
L 4 HOH B 103 403 407 HOH HOH . 
L 4 HOH B 104 404 409 HOH HOH . 
L 4 HOH B 105 405 410 HOH HOH . 
L 4 HOH B 106 406 411 HOH HOH . 
L 4 HOH B 107 407 412 HOH HOH . 
L 4 HOH B 108 408 413 HOH HOH . 
L 4 HOH B 109 409 418 HOH HOH . 
L 4 HOH B 110 410 420 HOH HOH . 
L 4 HOH B 111 411 423 HOH HOH . 
L 4 HOH B 112 412 424 HOH HOH . 
L 4 HOH B 113 413 426 HOH HOH . 
L 4 HOH B 114 414 427 HOH HOH . 
L 4 HOH B 115 415 431 HOH HOH . 
L 4 HOH B 116 416 435 HOH HOH . 
L 4 HOH B 117 417 436 HOH HOH . 
L 4 HOH B 118 418 437 HOH HOH . 
L 4 HOH B 119 419 438 HOH HOH . 
L 4 HOH B 120 420 439 HOH HOH . 
L 4 HOH B 121 421 440 HOH HOH . 
L 4 HOH B 122 422 441 HOH HOH . 
L 4 HOH B 123 423 442 HOH HOH . 
L 4 HOH B 124 424 443 HOH HOH . 
L 4 HOH B 125 425 445 HOH HOH . 
L 4 HOH B 126 426 446 HOH HOH . 
L 4 HOH B 127 427 449 HOH HOH . 
L 4 HOH B 128 428 450 HOH HOH . 
L 4 HOH B 129 429 451 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . E 3 86.648 18.025 28.069 1 48.78 ? C1 EDO 203 A 1 
HETATM 2 O O1 EDO . . . E 3 88.025 18.245 28.428 1 61.32 ? O1 EDO 203 A 1 
HETATM 3 C C2 EDO . . . E 3 86.268 16.554 28.223 1 44.19 ? C2 EDO 203 A 1 
HETATM 4 O O2 EDO . . . E 3 85.67 16.092 27.001 1 58.61 ? O2 EDO 203 A 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           336 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           4 
#