data_4LC5 # _model_server_result.job_id w_dd9gUz7oOIf_VXtc3e3Q _model_server_result.datetime_utc '2024-10-13 21:13:18' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4lc5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":201}' # _entry.id 4LC5 # _exptl.entry_id 4LC5 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4LC5 _cell.length_a 38.15 _cell.length_b 74.18 _cell.length_c 109.78 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4LC5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 182 A CYS 180 1_555 A SG CYS 191 A CYS 189 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.104 ? metalc ? metalc1 A ND1 HIS 79 A HIS 77 1_555 C ZN ZN . A ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.094 ? metalc ? metalc2 B ND1 HIS 79 B HIS 77 1_555 F ZN ZN . B ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.113 ? metalc ? metalc3 B SG CYS 117 B CYS 115 1_555 F ZN ZN . B ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.266 ? metalc ? metalc4 B SG CYS 114 B CYS 112 1_555 F ZN ZN . B ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.271 ? metalc ? metalc5 A SG CYS 117 A CYS 115 1_555 C ZN ZN . A ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.284 ? metalc ? metalc6 A SG CYS 114 A CYS 112 1_555 C ZN ZN . A ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.293 ? metalc ? metalc7 C ZN ZN . A ZN 201 1_555 I O HOH . A HOH 310 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.113 ? metalc ? metalc8 F ZN ZN . B ZN 201 1_555 J O HOH . B HOH 355 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.161 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4LC5 _atom_sites.fract_transf_matrix[1][1] 0.026212 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013481 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009109 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ZN A 1 201 506 ZN ZN . D 3 9MG A 1 202 1 9MG DRG . E 4 EDO A 1 203 501 EDO EDO . F 2 ZN B 1 201 507 ZN ZN . G 4 EDO B 1 202 502 EDO EDO . H 4 EDO B 1 203 503 EDO EDO . I 5 HOH A 1 301 3 HOH HOH . I 5 HOH A 2 302 8 HOH HOH . I 5 HOH A 3 303 12 HOH HOH . I 5 HOH A 4 304 13 HOH HOH . I 5 HOH A 5 305 15 HOH HOH . I 5 HOH A 6 306 18 HOH HOH . I 5 HOH A 7 307 21 HOH HOH . I 5 HOH A 8 308 22 HOH HOH . I 5 HOH A 9 309 23 HOH HOH . I 5 HOH A 10 310 26 HOH HOH . I 5 HOH A 11 311 27 HOH HOH . I 5 HOH A 12 312 30 HOH HOH . I 5 HOH A 13 313 31 HOH HOH . I 5 HOH A 14 314 32 HOH HOH . I 5 HOH A 15 315 33 HOH HOH . I 5 HOH A 16 316 36 HOH HOH . I 5 HOH A 17 317 39 HOH HOH . I 5 HOH A 18 318 41 HOH HOH . I 5 HOH A 19 319 42 HOH HOH . I 5 HOH A 20 320 44 HOH HOH . I 5 HOH A 21 321 45 HOH HOH . I 5 HOH A 22 322 46 HOH HOH . I 5 HOH A 23 323 48 HOH HOH . I 5 HOH A 24 324 49 HOH HOH . I 5 HOH A 25 325 50 HOH HOH . I 5 HOH A 26 326 51 HOH HOH . I 5 HOH A 27 327 52 HOH HOH . I 5 HOH A 28 328 53 HOH HOH . I 5 HOH A 29 329 54 HOH HOH . I 5 HOH A 30 330 57 HOH HOH . I 5 HOH A 31 331 59 HOH HOH . I 5 HOH A 32 332 60 HOH HOH . I 5 HOH A 33 333 61 HOH HOH . I 5 HOH A 34 334 62 HOH HOH . I 5 HOH A 35 335 65 HOH HOH . I 5 HOH A 36 336 67 HOH HOH . I 5 HOH A 37 337 70 HOH HOH . I 5 HOH A 38 338 74 HOH HOH . I 5 HOH A 39 339 78 HOH HOH . I 5 HOH A 40 340 80 HOH HOH . I 5 HOH A 41 341 86 HOH HOH . I 5 HOH A 42 342 87 HOH HOH . I 5 HOH A 43 343 88 HOH HOH . I 5 HOH A 44 344 90 HOH HOH . I 5 HOH A 45 345 91 HOH HOH . I 5 HOH A 46 346 94 HOH HOH . I 5 HOH A 47 347 95 HOH HOH . I 5 HOH A 48 348 99 HOH HOH . I 5 HOH A 49 349 101 HOH HOH . I 5 HOH A 50 350 102 HOH HOH . I 5 HOH A 51 351 104 HOH HOH . I 5 HOH A 52 352 106 HOH HOH . I 5 HOH A 53 353 107 HOH HOH . I 5 HOH A 54 354 108 HOH HOH . I 5 HOH A 55 355 115 HOH HOH . I 5 HOH A 56 356 116 HOH HOH . I 5 HOH A 57 357 117 HOH HOH . I 5 HOH A 58 358 118 HOH HOH . I 5 HOH A 59 359 119 HOH HOH . I 5 HOH A 60 360 120 HOH HOH . I 5 HOH A 61 361 122 HOH HOH . I 5 HOH A 62 362 124 HOH HOH . I 5 HOH A 63 363 126 HOH HOH . I 5 HOH A 64 364 134 HOH HOH . I 5 HOH A 65 365 136 HOH HOH . I 5 HOH A 66 366 142 HOH HOH . I 5 HOH A 67 367 143 HOH HOH . I 5 HOH A 68 368 145 HOH HOH . I 5 HOH A 69 369 148 HOH HOH . I 5 HOH A 70 370 149 HOH HOH . I 5 HOH A 71 371 150 HOH HOH . I 5 HOH A 72 372 152 HOH HOH . J 5 HOH B 1 301 1 HOH HOH . J 5 HOH B 2 302 2 HOH HOH . J 5 HOH B 3 303 4 HOH HOH . J 5 HOH B 4 304 5 HOH HOH . J 5 HOH B 5 305 6 HOH HOH . J 5 HOH B 6 306 9 HOH HOH . J 5 HOH B 7 307 11 HOH HOH . J 5 HOH B 8 308 14 HOH HOH . J 5 HOH B 9 309 16 HOH HOH . J 5 HOH B 10 310 17 HOH HOH . J 5 HOH B 11 311 20 HOH HOH . J 5 HOH B 12 312 24 HOH HOH . J 5 HOH B 13 313 25 HOH HOH . J 5 HOH B 14 314 28 HOH HOH . J 5 HOH B 15 315 29 HOH HOH . J 5 HOH B 16 316 34 HOH HOH . J 5 HOH B 17 317 35 HOH HOH . J 5 HOH B 18 318 37 HOH HOH . J 5 HOH B 19 319 38 HOH HOH . J 5 HOH B 20 320 40 HOH HOH . J 5 HOH B 21 321 43 HOH HOH . J 5 HOH B 22 322 47 HOH HOH . J 5 HOH B 23 323 56 HOH HOH . J 5 HOH B 24 324 58 HOH HOH . J 5 HOH B 25 325 63 HOH HOH . J 5 HOH B 26 326 64 HOH HOH . J 5 HOH B 27 327 66 HOH HOH . J 5 HOH B 28 328 68 HOH HOH . J 5 HOH B 29 329 69 HOH HOH . J 5 HOH B 30 330 71 HOH HOH . J 5 HOH B 31 331 72 HOH HOH . J 5 HOH B 32 332 73 HOH HOH . J 5 HOH B 33 333 75 HOH HOH . J 5 HOH B 34 334 76 HOH HOH . J 5 HOH B 35 335 77 HOH HOH . J 5 HOH B 36 336 79 HOH HOH . J 5 HOH B 37 337 81 HOH HOH . J 5 HOH B 38 338 82 HOH HOH . J 5 HOH B 39 339 84 HOH HOH . J 5 HOH B 40 340 85 HOH HOH . J 5 HOH B 41 341 89 HOH HOH . J 5 HOH B 42 342 92 HOH HOH . J 5 HOH B 43 343 93 HOH HOH . J 5 HOH B 44 344 96 HOH HOH . J 5 HOH B 45 345 97 HOH HOH . J 5 HOH B 46 346 98 HOH HOH . J 5 HOH B 47 347 100 HOH HOH . J 5 HOH B 48 348 103 HOH HOH . J 5 HOH B 49 349 105 HOH HOH . J 5 HOH B 50 350 109 HOH HOH . J 5 HOH B 51 351 110 HOH HOH . J 5 HOH B 52 352 111 HOH HOH . J 5 HOH B 53 353 112 HOH HOH . J 5 HOH B 54 354 113 HOH HOH . J 5 HOH B 55 355 114 HOH HOH . J 5 HOH B 56 356 121 HOH HOH . J 5 HOH B 57 357 123 HOH HOH . J 5 HOH B 58 358 127 HOH HOH . J 5 HOH B 59 359 128 HOH HOH . J 5 HOH B 60 360 129 HOH HOH . J 5 HOH B 61 361 130 HOH HOH . J 5 HOH B 62 362 131 HOH HOH . J 5 HOH B 63 363 132 HOH HOH . J 5 HOH B 64 364 133 HOH HOH . J 5 HOH B 65 365 135 HOH HOH . J 5 HOH B 66 366 138 HOH HOH . J 5 HOH B 67 367 139 HOH HOH . J 5 HOH B 68 368 140 HOH HOH . J 5 HOH B 69 369 141 HOH HOH . J 5 HOH B 70 370 144 HOH HOH . J 5 HOH B 71 371 147 HOH HOH . J 5 HOH B 72 372 151 HOH HOH . J 5 HOH B 73 373 153 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 2 _atom_site.Cartn_x 26.459 _atom_site.Cartn_y 34.52 _atom_site.Cartn_z 43.206 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 23.77 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 201 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 21 _model_server_stats.query_time_ms 276 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 1 #