data_4LCI # _model_server_result.job_id JD72ULAxLrLf8vMUmPJLhw _model_server_result.datetime_utc '2024-11-05 00:32:30' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4lci # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":201}' # _entry.id 4LCI # _exptl.entry_id 4LCI _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4LCI _cell.length_a 44.599 _cell.length_b 71.621 _cell.length_c 73.234 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4LCI _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 24 L CYS 23 1_555 A SG CYS 94 L CYS 89 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.098 ? disulf ? disulf2 B SG CYS 22 H CYS 22 1_555 B SG CYS 96 H CYS 93 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.057 ? metalc ? metalc1 A O TYR 100 L TYR 95 1_555 D NA NA . L NA 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.276 ? metalc ? metalc2 D NA NA . L NA 202 1_555 J O HOH . L HOH 321 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.7 ? metalc ? metalc3 D NA NA . L NA 202 1_555 J O HOH . L HOH 327 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.349 ? metalc ? metalc4 D NA NA . L NA 202 1_555 J O HOH . L HOH 328 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.406 ? metalc ? metalc5 D NA NA . L NA 202 1_555 J O HOH . L HOH 347 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.23 ? metalc ? metalc6 D NA NA . L NA 202 1_555 J O HOH . L HOH 379 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.67 ? # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 133 n n C1 C2 GOL sing 134 n n C1 H11 GOL sing 135 n n C1 H12 GOL sing 136 n n O1 HO1 GOL sing 137 n n C2 O2 GOL sing 138 n n C2 C3 GOL sing 139 n n C2 H2 GOL sing 140 n n O2 HO2 GOL sing 141 n n C3 O3 GOL sing 142 n n C3 H31 GOL sing 143 n n C3 H32 GOL sing 144 n n O3 HO3 GOL sing 145 n n # _atom_sites.entry_id 4LCI _atom_sites.fract_transf_matrix[1][1] 0.022422 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013962 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013655 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 GOL L 1 201 1 GOL GOL . D 4 NA L 1 202 1 NA NA . E 5 FMT L 1 203 1 FMT FMT . F 5 FMT L 1 204 4 FMT FMT . G 3 GOL H 1 201 2 GOL GOL . H 5 FMT H 1 202 2 FMT FMT . I 5 FMT H 1 203 3 FMT FMT . J 6 HOH L 1 301 1 HOH HOH . J 6 HOH L 2 302 2 HOH HOH . J 6 HOH L 3 303 3 HOH HOH . J 6 HOH L 4 304 5 HOH HOH . J 6 HOH L 5 305 11 HOH HOH . J 6 HOH L 6 306 13 HOH HOH . J 6 HOH L 7 307 15 HOH HOH . J 6 HOH L 8 308 17 HOH HOH . J 6 HOH L 9 309 19 HOH HOH . J 6 HOH L 10 310 21 HOH HOH . J 6 HOH L 11 311 24 HOH HOH . J 6 HOH L 12 312 25 HOH HOH . J 6 HOH L 13 313 26 HOH HOH . J 6 HOH L 14 314 27 HOH HOH . J 6 HOH L 15 315 28 HOH HOH . J 6 HOH L 16 316 30 HOH HOH . J 6 HOH L 17 317 31 HOH HOH . J 6 HOH L 18 318 32 HOH HOH . J 6 HOH L 19 319 33 HOH HOH . J 6 HOH L 20 320 38 HOH HOH . J 6 HOH L 21 321 40 HOH HOH . J 6 HOH L 22 322 41 HOH HOH . J 6 HOH L 23 323 42 HOH HOH . J 6 HOH L 24 324 48 HOH HOH . J 6 HOH L 25 325 49 HOH HOH . J 6 HOH L 26 326 50 HOH HOH . J 6 HOH L 27 327 51 HOH HOH . J 6 HOH L 28 328 52 HOH HOH . J 6 HOH L 29 329 54 HOH HOH . J 6 HOH L 30 330 55 HOH HOH . J 6 HOH L 31 331 56 HOH HOH . J 6 HOH L 32 332 57 HOH HOH . J 6 HOH L 33 333 58 HOH HOH . J 6 HOH L 34 334 59 HOH HOH . J 6 HOH L 35 335 60 HOH HOH . J 6 HOH L 36 336 61 HOH HOH . J 6 HOH L 37 337 62 HOH HOH . J 6 HOH L 38 338 64 HOH HOH . J 6 HOH L 39 339 66 HOH HOH . J 6 HOH L 40 340 68 HOH HOH . J 6 HOH L 41 341 70 HOH HOH . J 6 HOH L 42 342 72 HOH HOH . J 6 HOH L 43 343 78 HOH HOH . J 6 HOH L 44 344 83 HOH HOH . J 6 HOH L 45 345 84 HOH HOH . J 6 HOH L 46 346 85 HOH HOH . J 6 HOH L 47 347 87 HOH HOH . J 6 HOH L 48 348 88 HOH HOH . J 6 HOH L 49 349 89 HOH HOH . J 6 HOH L 50 350 90 HOH HOH . J 6 HOH L 51 351 91 HOH HOH . J 6 HOH L 52 352 92 HOH HOH . J 6 HOH L 53 353 94 HOH HOH . J 6 HOH L 54 354 95 HOH HOH . J 6 HOH L 55 355 96 HOH HOH . J 6 HOH L 56 356 97 HOH HOH . J 6 HOH L 57 357 101 HOH HOH . J 6 HOH L 58 358 120 HOH HOH . J 6 HOH L 59 359 123 HOH HOH . J 6 HOH L 60 360 126 HOH HOH . J 6 HOH L 61 361 137 HOH HOH . J 6 HOH L 62 362 138 HOH HOH . J 6 HOH L 63 363 139 HOH HOH . J 6 HOH L 64 364 140 HOH HOH . J 6 HOH L 65 365 141 HOH HOH . J 6 HOH L 66 366 142 HOH HOH . J 6 HOH L 67 367 143 HOH HOH . J 6 HOH L 68 368 145 HOH HOH . J 6 HOH L 69 369 153 HOH HOH . J 6 HOH L 70 370 154 HOH HOH . J 6 HOH L 71 371 155 HOH HOH . J 6 HOH L 72 372 156 HOH HOH . J 6 HOH L 73 373 158 HOH HOH . J 6 HOH L 74 374 159 HOH HOH . J 6 HOH L 75 375 162 HOH HOH . J 6 HOH L 76 376 165 HOH HOH . J 6 HOH L 77 377 168 HOH HOH . J 6 HOH L 78 378 171 HOH HOH . J 6 HOH L 79 379 175 HOH HOH . J 6 HOH L 80 380 181 HOH HOH . J 6 HOH L 81 381 182 HOH HOH . J 6 HOH L 82 382 183 HOH HOH . J 6 HOH L 83 383 184 HOH HOH . K 6 HOH H 1 301 4 HOH HOH . K 6 HOH H 2 302 6 HOH HOH . K 6 HOH H 3 303 7 HOH HOH . K 6 HOH H 4 304 8 HOH HOH . K 6 HOH H 5 305 9 HOH HOH . K 6 HOH H 6 306 10 HOH HOH . K 6 HOH H 7 307 12 HOH HOH . K 6 HOH H 8 308 14 HOH HOH . K 6 HOH H 9 309 16 HOH HOH . K 6 HOH H 10 310 18 HOH HOH . K 6 HOH H 11 311 20 HOH HOH . K 6 HOH H 12 312 23 HOH HOH . K 6 HOH H 13 313 29 HOH HOH . K 6 HOH H 14 314 34 HOH HOH . K 6 HOH H 15 315 35 HOH HOH . K 6 HOH H 16 316 36 HOH HOH . K 6 HOH H 17 317 37 HOH HOH . K 6 HOH H 18 318 39 HOH HOH . K 6 HOH H 19 319 43 HOH HOH . K 6 HOH H 20 320 44 HOH HOH . K 6 HOH H 21 321 45 HOH HOH . K 6 HOH H 22 322 46 HOH HOH . K 6 HOH H 23 323 47 HOH HOH . K 6 HOH H 24 324 53 HOH HOH . K 6 HOH H 25 325 63 HOH HOH . K 6 HOH H 26 326 65 HOH HOH . K 6 HOH H 27 327 67 HOH HOH . K 6 HOH H 28 328 71 HOH HOH . K 6 HOH H 29 329 73 HOH HOH . K 6 HOH H 30 330 74 HOH HOH . K 6 HOH H 31 331 75 HOH HOH . K 6 HOH H 32 332 76 HOH HOH . K 6 HOH H 33 333 77 HOH HOH . K 6 HOH H 34 334 79 HOH HOH . K 6 HOH H 35 335 80 HOH HOH . K 6 HOH H 36 336 81 HOH HOH . K 6 HOH H 37 337 82 HOH HOH . K 6 HOH H 38 338 86 HOH HOH . K 6 HOH H 39 339 93 HOH HOH . K 6 HOH H 40 340 98 HOH HOH . K 6 HOH H 41 341 99 HOH HOH . K 6 HOH H 42 342 100 HOH HOH . K 6 HOH H 43 343 102 HOH HOH . K 6 HOH H 44 344 104 HOH HOH . K 6 HOH H 45 345 105 HOH HOH . K 6 HOH H 46 346 106 HOH HOH . K 6 HOH H 47 347 107 HOH HOH . K 6 HOH H 48 348 109 HOH HOH . K 6 HOH H 49 349 110 HOH HOH . K 6 HOH H 50 350 111 HOH HOH . K 6 HOH H 51 351 112 HOH HOH . K 6 HOH H 52 352 113 HOH HOH . K 6 HOH H 53 353 114 HOH HOH . K 6 HOH H 54 354 115 HOH HOH . K 6 HOH H 55 355 116 HOH HOH . K 6 HOH H 56 356 117 HOH HOH . K 6 HOH H 57 357 119 HOH HOH . K 6 HOH H 58 358 121 HOH HOH . K 6 HOH H 59 359 122 HOH HOH . K 6 HOH H 60 360 125 HOH HOH . K 6 HOH H 61 361 127 HOH HOH . K 6 HOH H 62 362 129 HOH HOH . K 6 HOH H 63 363 130 HOH HOH . K 6 HOH H 64 364 132 HOH HOH . K 6 HOH H 65 365 135 HOH HOH . K 6 HOH H 66 366 136 HOH HOH . K 6 HOH H 67 367 144 HOH HOH . K 6 HOH H 68 368 148 HOH HOH . K 6 HOH H 69 369 151 HOH HOH . K 6 HOH H 70 370 160 HOH HOH . K 6 HOH H 71 371 161 HOH HOH . K 6 HOH H 72 372 163 HOH HOH . K 6 HOH H 73 373 164 HOH HOH . K 6 HOH H 74 374 166 HOH HOH . K 6 HOH H 75 375 167 HOH HOH . K 6 HOH H 76 376 169 HOH HOH . K 6 HOH H 77 377 170 HOH HOH . K 6 HOH H 78 378 174 HOH HOH . K 6 HOH H 79 379 176 HOH HOH . K 6 HOH H 80 380 177 HOH HOH . K 6 HOH H 81 381 178 HOH HOH . K 6 HOH H 82 382 179 HOH HOH . K 6 HOH H 83 383 180 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . G 3 14.298 -15.704 -13.389 1 61.29 ? C1 GOL 201 H 1 HETATM 2 O O1 GOL . . . G 3 15.719 -15.896 -13.476 1 68.23 ? O1 GOL 201 H 1 HETATM 3 C C2 GOL . . . G 3 13.555 -17 -13.039 1 59.26 ? C2 GOL 201 H 1 HETATM 4 O O2 GOL . . . G 3 13.161 -17.042 -11.657 1 66.51 ? O2 GOL 201 H 1 HETATM 5 C C3 GOL . . . G 3 12.334 -17.067 -13.928 1 46.72 ? C3 GOL 201 H 1 HETATM 6 O O3 GOL . . . G 3 11.364 -18.002 -13.487 1 50.75 ? O3 GOL 201 H 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 314 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 6 #