data_4LCO # _model_server_result.job_id QqRgUIigI0_ACobnXVlxfw _model_server_result.datetime_utc '2024-11-13 21:50:02' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4lco # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":201}' # _entry.id 4LCO # _exptl.entry_id 4LCO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 127.105 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 4,6-diamino-1,3,5-triazin-2-ol _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4LCO _cell.length_a 38.03 _cell.length_b 72.88 _cell.length_c 109.97 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4LCO _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 182 A CYS 180 1_555 A SG CYS 191 A CYS 189 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? metalc ? metalc1 A ND1 HIS 79 A HIS 77 1_555 C ZN ZN . A ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.908 ? metalc ? metalc2 A SG CYS 114 A CYS 112 1_555 C ZN ZN . A ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.347 ? metalc ? metalc3 A SG CYS 117 A CYS 115 1_555 C ZN ZN . A ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.137 ? metalc ? metalc4 C ZN ZN . A ZN 201 1_555 F O HOH . A HOH 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.832 ? metalc ? metalc5 B ND1 HIS 79 B HIS 77 1_555 E ZN ZN . B ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.937 ? metalc ? metalc6 B SG CYS 114 B CYS 112 1_555 E ZN ZN . B ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.206 ? metalc ? metalc7 B SG CYS 117 B CYS 115 1_555 E ZN ZN . B ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.254 ? metalc ? metalc8 E ZN ZN . B ZN 202 1_555 G O HOH . B HOH 325 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.948 ? # _chem_comp.formula 'C3 H5 N5 O' _chem_comp.formula_weight 127.105 _chem_comp.id 6AM _chem_comp.mon_nstd_flag . _chem_comp.name 4,6-diamino-1,3,5-triazin-2-ol _chem_comp.type non-polymer _chem_comp.pdbx_synonyms Ammeline # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag NAA CAG 6AM sing 1 n n CAG NAE 6AM sing 2 n y CAG NAD 6AM doub 3 n y NAE CAI 6AM doub 4 n y NAD CAH 6AM sing 5 n y CAI OAC 6AM sing 6 n n CAI NAF 6AM sing 7 n y CAH NAF 6AM doub 8 n y CAH NAB 6AM sing 9 n n NAA H1 6AM sing 10 n n NAA H2 6AM sing 11 n n NAB H4 6AM sing 12 n n NAB H5 6AM sing 13 n n OAC H3 6AM sing 14 n n # _atom_sites.entry_id 4LCO _atom_sites.fract_transf_matrix[1][1] 0.026295 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013721 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009093 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ZN A 1 201 506 ZN ZN . D 3 6AM B 1 201 1 6AM DRG . E 2 ZN B 1 202 507 ZN ZN . F 4 HOH A 1 301 3 HOH HOH . F 4 HOH A 2 302 6 HOH HOH . F 4 HOH A 3 303 12 HOH HOH . F 4 HOH A 4 304 13 HOH HOH . F 4 HOH A 5 305 16 HOH HOH . F 4 HOH A 6 306 17 HOH HOH . F 4 HOH A 7 307 21 HOH HOH . F 4 HOH A 8 308 23 HOH HOH . F 4 HOH A 9 309 24 HOH HOH . F 4 HOH A 10 310 25 HOH HOH . F 4 HOH A 11 311 30 HOH HOH . F 4 HOH A 12 312 34 HOH HOH . F 4 HOH A 13 313 35 HOH HOH . F 4 HOH A 14 314 36 HOH HOH . F 4 HOH A 15 315 39 HOH HOH . G 4 HOH B 1 301 1 HOH HOH . G 4 HOH B 2 302 2 HOH HOH . G 4 HOH B 3 303 4 HOH HOH . G 4 HOH B 4 304 5 HOH HOH . G 4 HOH B 5 305 7 HOH HOH . G 4 HOH B 6 306 8 HOH HOH . G 4 HOH B 7 307 9 HOH HOH . G 4 HOH B 8 308 10 HOH HOH . G 4 HOH B 9 309 11 HOH HOH . G 4 HOH B 10 310 14 HOH HOH . G 4 HOH B 11 311 15 HOH HOH . G 4 HOH B 12 312 18 HOH HOH . G 4 HOH B 13 313 19 HOH HOH . G 4 HOH B 14 314 20 HOH HOH . G 4 HOH B 15 315 22 HOH HOH . G 4 HOH B 16 316 26 HOH HOH . G 4 HOH B 17 317 27 HOH HOH . G 4 HOH B 18 318 28 HOH HOH . G 4 HOH B 19 319 29 HOH HOH . G 4 HOH B 20 320 31 HOH HOH . G 4 HOH B 21 321 32 HOH HOH . G 4 HOH B 22 322 33 HOH HOH . G 4 HOH B 23 323 37 HOH HOH . G 4 HOH B 24 324 38 HOH HOH . G 4 HOH B 25 325 40 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O OAC 6AM . . . D 3 32.154 39.234 27.088 1 34.56 ? OAC 6AM 201 B 1 HETATM 2 C CAI 6AM . . . D 3 32.873 38.066 27.059 1 36.69 ? CAI 6AM 201 B 1 HETATM 3 N NAF 6AM . . . D 3 34.056 38.02 27.711 1 36.07 ? NAF 6AM 201 B 1 HETATM 4 N NAE 6AM . . . D 3 32.381 36.969 26.4 1 36.79 ? NAE 6AM 201 B 1 HETATM 5 C CAG 6AM . . . D 3 33.065 35.808 26.377 1 34.2 ? CAG 6AM 201 B 1 HETATM 6 N NAA 6AM . . . D 3 32.545 34.671 25.669 1 31.61 ? NAA 6AM 201 B 1 HETATM 7 N NAD 6AM . . . D 3 34.245 35.77 27.042 1 35.36 ? NAD 6AM 201 B 1 HETATM 8 C CAH 6AM . . . D 3 34.747 36.857 27.708 1 35.41 ? CAH 6AM 201 B 1 HETATM 9 N NAB 6AM . . . D 3 36.005 36.804 28.4 1 32.84 ? NAB 6AM 201 B 1 # _model_server_stats.io_time_ms 5 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 215 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 9 #