data_4LDJ # _model_server_result.job_id f8UX0bcTTGNey3Afb7gIBw _model_server_result.datetime_utc '2024-11-26 12:03:59' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4ldj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":202}' # _entry.id 4LDJ # _exptl.entry_id 4LDJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4LDJ _cell.length_a 39.071 _cell.length_b 40.724 _cell.length_c 91.431 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4LDJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OG SER 18 A SER 17 1_555 C MG MG . A MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.113 ? metalc ? metalc2 B O1B GDP . A GDP 201 1_555 C MG MG . A MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? metalc ? metalc3 C MG MG . A MG 202 1_555 D O HOH . A HOH 547 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.12 ? metalc ? metalc4 C MG MG . A MG 202 1_555 D O HOH . A HOH 548 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.061 ? metalc ? metalc5 C MG MG . A MG 202 1_555 D O HOH . A HOH 549 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.102 ? metalc ? metalc6 C MG MG . A MG 202 1_555 D O HOH . A HOH 550 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.074 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4LDJ _atom_sites.fract_transf_matrix[1][1] 0.025594 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.024556 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010937 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GDP A 1 201 201 GDP GDP . C 3 MG A 1 202 202 MG MG . D 4 HOH A 1 301 301 HOH HOH . D 4 HOH A 2 302 302 HOH HOH . D 4 HOH A 3 303 307 HOH HOH . D 4 HOH A 4 304 308 HOH HOH . D 4 HOH A 5 305 309 HOH HOH . D 4 HOH A 6 306 310 HOH HOH . D 4 HOH A 7 307 311 HOH HOH . D 4 HOH A 8 308 312 HOH HOH . D 4 HOH A 9 309 313 HOH HOH . D 4 HOH A 10 310 314 HOH HOH . D 4 HOH A 11 311 315 HOH HOH . D 4 HOH A 12 312 316 HOH HOH . D 4 HOH A 13 313 317 HOH HOH . D 4 HOH A 14 314 318 HOH HOH . D 4 HOH A 15 315 319 HOH HOH . D 4 HOH A 16 316 320 HOH HOH . D 4 HOH A 17 317 321 HOH HOH . D 4 HOH A 18 318 322 HOH HOH . D 4 HOH A 19 319 323 HOH HOH . D 4 HOH A 20 320 324 HOH HOH . D 4 HOH A 21 321 325 HOH HOH . D 4 HOH A 22 322 326 HOH HOH . D 4 HOH A 23 323 327 HOH HOH . D 4 HOH A 24 324 328 HOH HOH . D 4 HOH A 25 325 329 HOH HOH . D 4 HOH A 26 326 330 HOH HOH . D 4 HOH A 27 327 331 HOH HOH . D 4 HOH A 28 328 332 HOH HOH . D 4 HOH A 29 329 333 HOH HOH . D 4 HOH A 30 330 334 HOH HOH . D 4 HOH A 31 331 335 HOH HOH . D 4 HOH A 32 332 336 HOH HOH . D 4 HOH A 33 333 337 HOH HOH . D 4 HOH A 34 334 338 HOH HOH . D 4 HOH A 35 335 339 HOH HOH . D 4 HOH A 36 336 340 HOH HOH . D 4 HOH A 37 337 341 HOH HOH . D 4 HOH A 38 338 342 HOH HOH . D 4 HOH A 39 339 343 HOH HOH . D 4 HOH A 40 340 344 HOH HOH . D 4 HOH A 41 341 345 HOH HOH . D 4 HOH A 42 342 346 HOH HOH . D 4 HOH A 43 343 347 HOH HOH . D 4 HOH A 44 344 348 HOH HOH . D 4 HOH A 45 345 349 HOH HOH . D 4 HOH A 46 346 350 HOH HOH . D 4 HOH A 47 347 351 HOH HOH . D 4 HOH A 48 348 352 HOH HOH . D 4 HOH A 49 349 353 HOH HOH . D 4 HOH A 50 350 354 HOH HOH . D 4 HOH A 51 351 355 HOH HOH . D 4 HOH A 52 352 356 HOH HOH . D 4 HOH A 53 353 357 HOH HOH . D 4 HOH A 54 354 358 HOH HOH . D 4 HOH A 55 355 359 HOH HOH . D 4 HOH A 56 356 360 HOH HOH . D 4 HOH A 57 357 361 HOH HOH . D 4 HOH A 58 358 362 HOH HOH . D 4 HOH A 59 359 363 HOH HOH . D 4 HOH A 60 360 364 HOH HOH . D 4 HOH A 61 361 365 HOH HOH . D 4 HOH A 62 362 366 HOH HOH . D 4 HOH A 63 363 367 HOH HOH . D 4 HOH A 64 364 368 HOH HOH . D 4 HOH A 65 365 369 HOH HOH . D 4 HOH A 66 366 370 HOH HOH . D 4 HOH A 67 367 371 HOH HOH . D 4 HOH A 68 368 372 HOH HOH . D 4 HOH A 69 369 373 HOH HOH . D 4 HOH A 70 370 374 HOH HOH . D 4 HOH A 71 371 375 HOH HOH . D 4 HOH A 72 372 376 HOH HOH . D 4 HOH A 73 373 377 HOH HOH . D 4 HOH A 74 374 378 HOH HOH . D 4 HOH A 75 375 379 HOH HOH . D 4 HOH A 76 376 380 HOH HOH . D 4 HOH A 77 377 381 HOH HOH . D 4 HOH A 78 378 382 HOH HOH . D 4 HOH A 79 379 383 HOH HOH . D 4 HOH A 80 380 385 HOH HOH . D 4 HOH A 81 381 386 HOH HOH . D 4 HOH A 82 382 387 HOH HOH . D 4 HOH A 83 383 388 HOH HOH . D 4 HOH A 84 384 389 HOH HOH . D 4 HOH A 85 385 390 HOH HOH . D 4 HOH A 86 386 391 HOH HOH . D 4 HOH A 87 387 392 HOH HOH . D 4 HOH A 88 388 393 HOH HOH . D 4 HOH A 89 389 395 HOH HOH . D 4 HOH A 90 390 396 HOH HOH . D 4 HOH A 91 391 397 HOH HOH . D 4 HOH A 92 392 398 HOH HOH . D 4 HOH A 93 393 399 HOH HOH . D 4 HOH A 94 394 400 HOH HOH . D 4 HOH A 95 395 401 HOH HOH . D 4 HOH A 96 396 402 HOH HOH . D 4 HOH A 97 397 403 HOH HOH . D 4 HOH A 98 398 404 HOH HOH . D 4 HOH A 99 399 405 HOH HOH . D 4 HOH A 100 400 406 HOH HOH . D 4 HOH A 101 401 407 HOH HOH . D 4 HOH A 102 402 408 HOH HOH . D 4 HOH A 103 403 409 HOH HOH . D 4 HOH A 104 404 410 HOH HOH . D 4 HOH A 105 405 411 HOH HOH . D 4 HOH A 106 406 412 HOH HOH . D 4 HOH A 107 407 413 HOH HOH . D 4 HOH A 108 408 414 HOH HOH . D 4 HOH A 109 409 415 HOH HOH . D 4 HOH A 110 410 416 HOH HOH . D 4 HOH A 111 411 417 HOH HOH . D 4 HOH A 112 412 418 HOH HOH . D 4 HOH A 113 413 419 HOH HOH . D 4 HOH A 114 414 420 HOH HOH . D 4 HOH A 115 415 421 HOH HOH . D 4 HOH A 116 416 422 HOH HOH . D 4 HOH A 117 417 423 HOH HOH . D 4 HOH A 118 418 424 HOH HOH . D 4 HOH A 119 419 425 HOH HOH . D 4 HOH A 120 420 426 HOH HOH . D 4 HOH A 121 421 427 HOH HOH . D 4 HOH A 122 422 428 HOH HOH . D 4 HOH A 123 423 429 HOH HOH . D 4 HOH A 124 424 430 HOH HOH . D 4 HOH A 125 425 431 HOH HOH . D 4 HOH A 126 426 432 HOH HOH . D 4 HOH A 127 427 433 HOH HOH . D 4 HOH A 128 428 434 HOH HOH . D 4 HOH A 129 429 435 HOH HOH . D 4 HOH A 130 430 436 HOH HOH . D 4 HOH A 131 431 437 HOH HOH . D 4 HOH A 132 432 438 HOH HOH . D 4 HOH A 133 433 439 HOH HOH . D 4 HOH A 134 434 440 HOH HOH . D 4 HOH A 135 435 441 HOH HOH . D 4 HOH A 136 436 442 HOH HOH . D 4 HOH A 137 437 443 HOH HOH . D 4 HOH A 138 438 444 HOH HOH . D 4 HOH A 139 439 445 HOH HOH . D 4 HOH A 140 440 446 HOH HOH . D 4 HOH A 141 441 447 HOH HOH . D 4 HOH A 142 442 448 HOH HOH . D 4 HOH A 143 443 449 HOH HOH . D 4 HOH A 144 444 450 HOH HOH . D 4 HOH A 145 445 451 HOH HOH . D 4 HOH A 146 446 452 HOH HOH . D 4 HOH A 147 447 453 HOH HOH . D 4 HOH A 148 448 454 HOH HOH . D 4 HOH A 149 449 455 HOH HOH . D 4 HOH A 150 450 456 HOH HOH . D 4 HOH A 151 451 457 HOH HOH . D 4 HOH A 152 452 458 HOH HOH . D 4 HOH A 153 453 459 HOH HOH . D 4 HOH A 154 454 460 HOH HOH . D 4 HOH A 155 455 461 HOH HOH . D 4 HOH A 156 456 462 HOH HOH . D 4 HOH A 157 457 463 HOH HOH . D 4 HOH A 158 458 464 HOH HOH . D 4 HOH A 159 459 466 HOH HOH . D 4 HOH A 160 460 467 HOH HOH . D 4 HOH A 161 461 468 HOH HOH . D 4 HOH A 162 462 469 HOH HOH . D 4 HOH A 163 463 470 HOH HOH . D 4 HOH A 164 464 471 HOH HOH . D 4 HOH A 165 465 472 HOH HOH . D 4 HOH A 166 466 473 HOH HOH . D 4 HOH A 167 467 474 HOH HOH . D 4 HOH A 168 468 476 HOH HOH . D 4 HOH A 169 469 477 HOH HOH . D 4 HOH A 170 470 478 HOH HOH . D 4 HOH A 171 471 479 HOH HOH . D 4 HOH A 172 472 480 HOH HOH . D 4 HOH A 173 473 481 HOH HOH . D 4 HOH A 174 474 482 HOH HOH . D 4 HOH A 175 475 483 HOH HOH . D 4 HOH A 176 476 484 HOH HOH . D 4 HOH A 177 477 485 HOH HOH . D 4 HOH A 178 478 486 HOH HOH . D 4 HOH A 179 479 487 HOH HOH . D 4 HOH A 180 480 488 HOH HOH . D 4 HOH A 181 481 491 HOH HOH . D 4 HOH A 182 482 492 HOH HOH . D 4 HOH A 183 483 493 HOH HOH . D 4 HOH A 184 484 494 HOH HOH . D 4 HOH A 185 485 495 HOH HOH . D 4 HOH A 186 486 496 HOH HOH . D 4 HOH A 187 487 498 HOH HOH . D 4 HOH A 188 488 499 HOH HOH . D 4 HOH A 189 489 500 HOH HOH . D 4 HOH A 190 490 501 HOH HOH . D 4 HOH A 191 491 502 HOH HOH . D 4 HOH A 192 492 503 HOH HOH . D 4 HOH A 193 493 504 HOH HOH . D 4 HOH A 194 494 505 HOH HOH . D 4 HOH A 195 495 506 HOH HOH . D 4 HOH A 196 496 508 HOH HOH . D 4 HOH A 197 497 509 HOH HOH . D 4 HOH A 198 498 510 HOH HOH . D 4 HOH A 199 499 511 HOH HOH . D 4 HOH A 200 500 512 HOH HOH . D 4 HOH A 201 501 513 HOH HOH . D 4 HOH A 202 502 514 HOH HOH . D 4 HOH A 203 503 515 HOH HOH . D 4 HOH A 204 504 516 HOH HOH . D 4 HOH A 205 505 517 HOH HOH . D 4 HOH A 206 506 518 HOH HOH . D 4 HOH A 207 507 519 HOH HOH . D 4 HOH A 208 508 520 HOH HOH . D 4 HOH A 209 509 521 HOH HOH . D 4 HOH A 210 510 522 HOH HOH . D 4 HOH A 211 511 523 HOH HOH . D 4 HOH A 212 512 524 HOH HOH . D 4 HOH A 213 513 525 HOH HOH . D 4 HOH A 214 514 526 HOH HOH . D 4 HOH A 215 515 527 HOH HOH . D 4 HOH A 216 516 528 HOH HOH . D 4 HOH A 217 517 529 HOH HOH . D 4 HOH A 218 518 530 HOH HOH . D 4 HOH A 219 519 531 HOH HOH . D 4 HOH A 220 520 532 HOH HOH . D 4 HOH A 221 521 533 HOH HOH . D 4 HOH A 222 522 534 HOH HOH . D 4 HOH A 223 523 535 HOH HOH . D 4 HOH A 224 524 536 HOH HOH . D 4 HOH A 225 525 537 HOH HOH . D 4 HOH A 226 526 538 HOH HOH . D 4 HOH A 227 527 539 HOH HOH . D 4 HOH A 228 528 540 HOH HOH . D 4 HOH A 229 529 541 HOH HOH . D 4 HOH A 230 530 542 HOH HOH . D 4 HOH A 231 531 543 HOH HOH . D 4 HOH A 232 532 544 HOH HOH . D 4 HOH A 233 533 545 HOH HOH . D 4 HOH A 234 534 546 HOH HOH . D 4 HOH A 235 535 547 HOH HOH . D 4 HOH A 236 536 548 HOH HOH . D 4 HOH A 237 537 549 HOH HOH . D 4 HOH A 238 538 550 HOH HOH . D 4 HOH A 239 539 551 HOH HOH . D 4 HOH A 240 540 552 HOH HOH . D 4 HOH A 241 541 553 HOH HOH . D 4 HOH A 242 542 554 HOH HOH . D 4 HOH A 243 543 555 HOH HOH . D 4 HOH A 244 544 556 HOH HOH . D 4 HOH A 245 545 557 HOH HOH . D 4 HOH A 246 546 558 HOH HOH . D 4 HOH A 247 547 547 HOH HOH . D 4 HOH A 248 548 548 HOH HOH . D 4 HOH A 249 549 549 HOH HOH . D 4 HOH A 250 550 550 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x 52.054 _atom_site.Cartn_y 31.83 _atom_site.Cartn_z 15.21 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 6.57 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 202 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 258 _model_server_stats.encode_time_ms 11 _model_server_stats.element_count 1 #