data_4LES # _model_server_result.job_id m7ijl4M5vymeba8B_aH71w _model_server_result.datetime_utc '2024-11-28 09:08:15' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4les # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":305}' # _entry.id 4LES # _exptl.entry_id 4LES _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 150.173 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'TRIETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4LES _cell.length_a 95.754 _cell.length_b 95.754 _cell.length_c 41.518 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4LES _symmetry.cell_setting ? _symmetry.Int_Tables_number 173 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 63' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C PRO 126 A PRO 129 1_555 A N MSE 127 A MSE 130 1_555 ? ? ? ? A ? ? ? ? ? ? ? 1.322 ? covale ? covale2 A C PRO 126 A PRO 129 1_555 A N MSE 127 A MSE 130 1_555 ? ? ? ? B ? ? ? ? ? ? ? 1.323 ? covale ? covale3 A C MSE 127 A MSE 130 1_555 A N LYS 128 A LYS 131 1_555 ? A ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale4 A C MSE 127 A MSE 130 1_555 A N LYS 128 A LYS 131 1_555 ? B ? ? ? ? ? ? ? ? ? ? 1.326 ? # _chem_comp.formula 'C6 H14 O4' _chem_comp.formula_weight 150.173 _chem_comp.id PGE _chem_comp.mon_nstd_flag . _chem_comp.name 'TRIETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PGE sing 232 n n C1 C2 PGE sing 233 n n C1 H1 PGE sing 234 n n C1 H12 PGE sing 235 n n O1 HO1 PGE sing 236 n n C2 O2 PGE sing 237 n n C2 H2 PGE sing 238 n n C2 H22 PGE sing 239 n n O2 C3 PGE sing 240 n n C3 C4 PGE sing 241 n n C3 H3 PGE sing 242 n n C3 H32 PGE sing 243 n n C4 O3 PGE sing 244 n n C4 H4 PGE sing 245 n n C4 H42 PGE sing 246 n n O4 C6 PGE sing 247 n n O4 HO4 PGE sing 248 n n C6 C5 PGE sing 249 n n C6 H6 PGE sing 250 n n C6 H62 PGE sing 251 n n C5 O3 PGE sing 252 n n C5 H5 PGE sing 253 n n C5 H52 PGE sing 254 n n # _atom_sites.entry_id 4LES _atom_sites.fract_transf_matrix[1][1] 0.010443 _atom_sites.fract_transf_matrix[1][2] 0.00603 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012059 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.024086 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CL A 1 301 1 CL CL . C 3 EOH A 1 302 2 EOH EOH . D 3 EOH A 1 303 3 EOH EOH . E 4 PO4 A 1 304 4 PO4 PO4 . F 5 PGE A 1 305 5 PGE PGE . G 6 HOH A 1 401 6 HOH HOH . G 6 HOH A 2 402 7 HOH HOH . G 6 HOH A 3 403 8 HOH HOH . G 6 HOH A 4 404 9 HOH HOH . G 6 HOH A 5 405 10 HOH HOH . G 6 HOH A 6 406 11 HOH HOH . G 6 HOH A 7 407 12 HOH HOH . G 6 HOH A 8 408 13 HOH HOH . G 6 HOH A 9 409 14 HOH HOH . G 6 HOH A 10 410 15 HOH HOH . G 6 HOH A 11 411 16 HOH HOH . G 6 HOH A 12 412 17 HOH HOH . G 6 HOH A 13 413 18 HOH HOH . G 6 HOH A 14 414 19 HOH HOH . G 6 HOH A 15 415 20 HOH HOH . G 6 HOH A 16 416 21 HOH HOH . G 6 HOH A 17 417 22 HOH HOH . G 6 HOH A 18 418 23 HOH HOH . G 6 HOH A 19 419 24 HOH HOH . G 6 HOH A 20 420 25 HOH HOH . G 6 HOH A 21 421 26 HOH HOH . G 6 HOH A 22 422 27 HOH HOH . G 6 HOH A 23 423 28 HOH HOH . G 6 HOH A 24 424 29 HOH HOH . G 6 HOH A 25 425 30 HOH HOH . G 6 HOH A 26 426 31 HOH HOH . G 6 HOH A 27 427 32 HOH HOH . G 6 HOH A 28 428 33 HOH HOH . G 6 HOH A 29 429 34 HOH HOH . G 6 HOH A 30 430 35 HOH HOH . G 6 HOH A 31 431 36 HOH HOH . G 6 HOH A 32 432 37 HOH HOH . G 6 HOH A 33 433 38 HOH HOH . G 6 HOH A 34 434 39 HOH HOH . G 6 HOH A 35 435 40 HOH HOH . G 6 HOH A 36 436 41 HOH HOH . G 6 HOH A 37 437 42 HOH HOH . G 6 HOH A 38 438 43 HOH HOH . G 6 HOH A 39 439 44 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PGE . . . F 5 33.824 51.402 32.309 1 94.33 ? C1 PGE 305 A 1 HETATM 2 O O1 PGE . . . F 5 34.666 52.079 31.369 1 89.32 ? O1 PGE 305 A 1 HETATM 3 C C2 PGE . . . F 5 33.273 50.113 31.707 1 95.35 ? C2 PGE 305 A 1 HETATM 4 O O2 PGE . . . F 5 32.515 50.389 30.519 1 96.68 ? O2 PGE 305 A 1 HETATM 5 C C3 PGE . . . F 5 32.659 49.439 29.456 1 87.48 ? C3 PGE 305 A 1 HETATM 6 C C4 PGE . . . F 5 32.379 47.999 29.902 1 82.14 ? C4 PGE 305 A 1 HETATM 7 O O4 PGE . . . F 5 36.147 45.767 31.242 1 81.29 ? O4 PGE 305 A 1 HETATM 8 C C6 PGE . . . F 5 35.346 45.79 30.041 1 72.66 ? C6 PGE 305 A 1 HETATM 9 C C5 PGE . . . F 5 33.884 46.137 30.331 1 73.28 ? C5 PGE 305 A 1 HETATM 10 O O3 PGE . . . F 5 33.424 47.141 29.42 1 78.11 ? O3 PGE 305 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 16 _model_server_stats.query_time_ms 302 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 10 #