data_4LFD # _model_server_result.job_id py9flpJ02YBua_vfhr4VvQ _model_server_result.datetime_utc '2024-11-15 03:46:44' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4lfd # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"L","auth_seq_id":303}' # _entry.id 4LFD # _exptl.entry_id 4LFD _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 8 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90.02 _cell.angle_gamma 90 _cell.entry_id 4LFD _cell.length_a 102.6 _cell.length_b 59.12 _cell.length_c 72.49 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4LFD _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 PISA dimeric 2 author_and_software_defined_assembly 3 PISA dimeric 2 author_and_software_defined_assembly 4 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,I,Q 1 1 C,D,J,K,L,R,S 2 1 E,F,M,N,T 3 1 G,H,O,P,U 4 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 I N N ? 3 J N N ? 3 K N N ? 3 L N N ? 3 M N N ? 3 N N N ? 3 O N N ? 3 P N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 195 A CYS 223 1_555 B SG B27 5 E B27 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.012 ? covale ? covale2 B C1 PHQ 1 E PHQ 300 1_555 B N ASN 2 E ASN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.389 ? covale ? covale3 B C GLN 4 E GLN 303 1_555 B N B27 5 E B27 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.374 ? covale ? covale4 C SG CYS 195 B CYS 223 1_555 D SG B27 5 F B27 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.06 ? covale ? covale5 D C1 PHQ 1 F PHQ 300 1_555 D N ASN 2 F ASN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.382 ? covale ? covale6 D C GLN 4 F GLN 303 1_555 D N B27 5 F B27 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.379 ? covale ? covale7 E SG CYS 195 C CYS 223 1_555 F SG B27 5 G B27 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? covale ? covale8 F C1 PHQ 1 G PHQ 300 1_555 F N ASN 2 G ASN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.381 ? covale ? covale9 F C GLN 4 G GLN 303 1_555 F N B27 5 G B27 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.392 ? covale ? covale10 G SG CYS 195 D CYS 223 1_555 H SG B27 5 H B27 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? covale ? covale11 H C1 PHQ 1 H PHQ 300 1_555 H N ASN 2 H ASN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.396 ? covale ? covale12 H C GLN 4 H GLN 303 1_555 H N B27 5 H B27 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.373 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 325 n n S O2 SO4 doub 326 n n S O3 SO4 sing 327 n n S O4 SO4 sing 328 n n # _atom_sites.entry_id 4LFD _atom_sites.fract_transf_matrix[1][1] 0.009747 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016915 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013795 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code I 3 SO4 A 1 301 3 SO4 SO4 . J 3 SO4 B 1 301 6 SO4 SO4 . K 3 SO4 B 1 302 7 SO4 SO4 . L 3 SO4 B 1 303 9 SO4 SO4 . M 3 SO4 C 1 301 2 SO4 SO4 . N 3 SO4 C 1 302 5 SO4 SO4 . O 3 SO4 D 1 301 10 SO4 SO4 . P 3 SO4 D 1 302 11 SO4 SO4 . Q 4 HOH A 1 401 11 HOH HOH . Q 4 HOH A 2 402 18 HOH HOH . Q 4 HOH A 3 403 26 HOH HOH . Q 4 HOH A 4 404 33 HOH HOH . R 4 HOH B 1 401 1 HOH HOH . R 4 HOH B 2 402 2 HOH HOH . R 4 HOH B 3 403 10 HOH HOH . R 4 HOH B 4 404 16 HOH HOH . R 4 HOH B 5 405 17 HOH HOH . R 4 HOH B 6 406 23 HOH HOH . R 4 HOH B 7 407 27 HOH HOH . R 4 HOH B 8 408 28 HOH HOH . R 4 HOH B 9 409 29 HOH HOH . S 4 HOH F 1 401 22 HOH HOH . T 4 HOH C 1 401 4 HOH HOH . T 4 HOH C 2 402 7 HOH HOH . T 4 HOH C 3 403 13 HOH HOH . T 4 HOH C 4 404 19 HOH HOH . T 4 HOH C 5 405 20 HOH HOH . T 4 HOH C 6 406 24 HOH HOH . T 4 HOH C 7 407 34 HOH HOH . U 4 HOH D 1 401 9 HOH HOH . U 4 HOH D 2 402 21 HOH HOH . U 4 HOH D 3 403 25 HOH HOH . U 4 HOH D 4 404 30 HOH HOH . U 4 HOH D 5 405 31 HOH HOH . U 4 HOH D 6 406 32 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . L 3 43.621 42.574 4.616 1 50.15 ? S SO4 303 B 1 HETATM 2 O O1 SO4 . . . L 3 44.197 41.536 3.827 1 45.75 ? O1 SO4 303 B 1 HETATM 3 O O2 SO4 . . . L 3 42.714 42.027 5.638 1 51.6 ? O2 SO4 303 B 1 HETATM 4 O O3 SO4 . . . L 3 44.654 43.37 5.326 1 55 ? O3 SO4 303 B 1 HETATM 5 O O4 SO4 . . . L 3 42.953 43.456 3.66 1 51.41 ? O4 SO4 303 B 1 # _model_server_stats.io_time_ms 19 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 321 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 5 #