data_4LFP # _model_server_result.job_id u42ZoQ3U0HU3Uy74BasU_Q _model_server_result.datetime_utc '2024-11-14 23:11:42' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4lfp # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":305}' # _entry.id 4LFP # _exptl.entry_id 4LFP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 22.99 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SODIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4LFP _cell.length_a 78.046 _cell.length_b 78.046 _cell.length_c 37.317 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4LFP _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 6 A CYS 6 1_555 A SG CYS 127 A CYS 127 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? disulf ? disulf2 A SG CYS 30 A CYS 30 1_555 A SG CYS 115 A CYS 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? disulf ? disulf3 A SG CYS 64 A CYS 64 1_555 A SG CYS 80 A CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.057 ? disulf ? disulf4 A SG CYS 76 A CYS 76 1_555 A SG CYS 94 A CYS 94 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? metalc ? metalc1 A NE2 HIS 15 A HIS 15 1_555 B AU AU . A AU 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.273 ? metalc ? metalc2 A O SER 60 A SER 60 1_555 F NA NA . A NA 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.299 ? metalc ? metalc3 A O CYS 64 A CYS 64 1_555 F NA NA . A NA 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.563 ? metalc ? metalc4 A OG SER 72 A SER 72 1_555 F NA NA . A NA 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.716 ? metalc ? metalc5 A O ARG 73 A ARG 73 1_555 F NA NA . A NA 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.557 ? metalc ? metalc6 F NA NA . A NA 305 1_555 G O HOH . A HOH 414 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.397 ? metalc ? metalc7 F NA NA . A NA 305 1_555 G O HOH . A HOH 419 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.584 ? # _chem_comp.formula 'Na 1' _chem_comp.formula_weight 22.99 _chem_comp.id NA _chem_comp.mon_nstd_flag . _chem_comp.name 'SODIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4LFP _atom_sites.fract_transf_matrix[1][1] 0.012813 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012813 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.026797 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 AU A 1 301 301 AU AU1 . C 3 CL A 1 302 302 CL CL . D 3 CL A 1 303 1 CL CL . E 3 CL A 1 304 2 CL CL . F 4 NA A 1 305 10 NA NA . G 5 HOH A 1 401 4 HOH HOH . G 5 HOH A 2 402 6 HOH HOH . G 5 HOH A 3 403 7 HOH HOH . G 5 HOH A 4 404 8 HOH HOH . G 5 HOH A 5 405 9 HOH HOH . G 5 HOH A 6 406 11 HOH HOH . G 5 HOH A 7 407 12 HOH HOH . G 5 HOH A 8 408 18 HOH HOH . G 5 HOH A 9 409 19 HOH HOH . G 5 HOH A 10 410 22 HOH HOH . G 5 HOH A 11 411 23 HOH HOH . G 5 HOH A 12 412 26 HOH HOH . G 5 HOH A 13 413 28 HOH HOH . G 5 HOH A 14 414 30 HOH HOH . G 5 HOH A 15 415 31 HOH HOH . G 5 HOH A 16 416 32 HOH HOH . G 5 HOH A 17 417 33 HOH HOH . G 5 HOH A 18 418 35 HOH HOH . G 5 HOH A 19 419 36 HOH HOH . G 5 HOH A 20 420 37 HOH HOH . G 5 HOH A 21 421 39 HOH HOH . G 5 HOH A 22 422 40 HOH HOH . G 5 HOH A 23 423 42 HOH HOH . G 5 HOH A 24 424 43 HOH HOH . G 5 HOH A 25 425 44 HOH HOH . G 5 HOH A 26 426 45 HOH HOH . G 5 HOH A 27 427 46 HOH HOH . G 5 HOH A 28 428 48 HOH HOH . G 5 HOH A 29 429 50 HOH HOH . G 5 HOH A 30 430 51 HOH HOH . G 5 HOH A 31 431 52 HOH HOH . G 5 HOH A 32 432 53 HOH HOH . G 5 HOH A 33 433 54 HOH HOH . G 5 HOH A 34 434 55 HOH HOH . G 5 HOH A 35 435 58 HOH HOH . G 5 HOH A 36 436 59 HOH HOH . G 5 HOH A 37 437 60 HOH HOH . G 5 HOH A 38 438 62 HOH HOH . G 5 HOH A 39 439 64 HOH HOH . G 5 HOH A 40 440 66 HOH HOH . G 5 HOH A 41 441 67 HOH HOH . G 5 HOH A 42 442 68 HOH HOH . G 5 HOH A 43 443 69 HOH HOH . G 5 HOH A 44 444 72 HOH HOH . G 5 HOH A 45 445 74 HOH HOH . G 5 HOH A 46 446 76 HOH HOH . G 5 HOH A 47 447 80 HOH HOH . G 5 HOH A 48 448 81 HOH HOH . G 5 HOH A 49 449 82 HOH HOH . G 5 HOH A 50 450 83 HOH HOH . G 5 HOH A 51 451 84 HOH HOH . G 5 HOH A 52 452 86 HOH HOH . G 5 HOH A 53 453 88 HOH HOH . G 5 HOH A 54 454 89 HOH HOH . G 5 HOH A 55 455 90 HOH HOH . G 5 HOH A 56 456 91 HOH HOH . G 5 HOH A 57 457 92 HOH HOH . G 5 HOH A 58 458 93 HOH HOH . G 5 HOH A 59 459 94 HOH HOH . G 5 HOH A 60 460 95 HOH HOH . G 5 HOH A 61 461 98 HOH HOH . G 5 HOH A 62 462 101 HOH HOH . G 5 HOH A 63 463 107 HOH HOH . G 5 HOH A 64 464 113 HOH HOH . G 5 HOH A 65 465 114 HOH HOH . G 5 HOH A 66 466 117 HOH HOH . G 5 HOH A 67 467 118 HOH HOH . G 5 HOH A 68 468 121 HOH HOH . G 5 HOH A 69 469 122 HOH HOH . G 5 HOH A 70 470 125 HOH HOH . G 5 HOH A 71 471 130 HOH HOH . G 5 HOH A 72 472 134 HOH HOH . G 5 HOH A 73 473 135 HOH HOH . G 5 HOH A 74 474 137 HOH HOH . G 5 HOH A 75 475 141 HOH HOH . G 5 HOH A 76 476 142 HOH HOH . G 5 HOH A 77 477 147 HOH HOH . G 5 HOH A 78 478 148 HOH HOH . G 5 HOH A 79 479 151 HOH HOH . G 5 HOH A 80 480 156 HOH HOH . G 5 HOH A 81 481 162 HOH HOH . G 5 HOH A 82 482 168 HOH HOH . G 5 HOH A 83 483 170 HOH HOH . G 5 HOH A 84 484 177 HOH HOH . G 5 HOH A 85 485 180 HOH HOH . G 5 HOH A 86 486 181 HOH HOH . G 5 HOH A 87 487 182 HOH HOH . G 5 HOH A 88 488 186 HOH HOH . G 5 HOH A 89 489 187 HOH HOH . G 5 HOH A 90 490 191 HOH HOH . G 5 HOH A 91 491 192 HOH HOH . G 5 HOH A 92 492 194 HOH HOH . G 5 HOH A 93 493 195 HOH HOH . G 5 HOH A 94 494 196 HOH HOH . G 5 HOH A 95 495 198 HOH HOH . G 5 HOH A 96 496 200 HOH HOH . G 5 HOH A 97 497 201 HOH HOH . G 5 HOH A 98 498 203 HOH HOH . G 5 HOH A 99 499 204 HOH HOH . G 5 HOH A 100 500 207 HOH HOH . G 5 HOH A 101 501 209 HOH HOH . G 5 HOH A 102 502 210 HOH HOH . G 5 HOH A 103 503 213 HOH HOH . G 5 HOH A 104 504 214 HOH HOH . G 5 HOH A 105 505 215 HOH HOH . G 5 HOH A 106 506 216 HOH HOH . G 5 HOH A 107 507 217 HOH HOH . G 5 HOH A 108 508 218 HOH HOH . G 5 HOH A 109 509 219 HOH HOH . G 5 HOH A 110 510 220 HOH HOH . G 5 HOH A 111 511 221 HOH HOH . G 5 HOH A 112 512 223 HOH HOH . G 5 HOH A 113 513 224 HOH HOH . G 5 HOH A 114 514 225 HOH HOH . G 5 HOH A 115 515 226 HOH HOH . G 5 HOH A 116 516 227 HOH HOH . G 5 HOH A 117 517 228 HOH HOH . G 5 HOH A 118 518 229 HOH HOH . G 5 HOH A 119 519 230 HOH HOH . G 5 HOH A 120 520 231 HOH HOH . G 5 HOH A 121 521 232 HOH HOH . G 5 HOH A 122 522 233 HOH HOH . G 5 HOH A 123 523 235 HOH HOH . G 5 HOH A 124 524 236 HOH HOH . G 5 HOH A 125 525 237 HOH HOH . G 5 HOH A 126 526 238 HOH HOH . G 5 HOH A 127 527 239 HOH HOH . G 5 HOH A 128 528 240 HOH HOH . G 5 HOH A 129 529 241 HOH HOH . G 5 HOH A 130 530 246 HOH HOH . G 5 HOH A 131 531 321 HOH HOH . G 5 HOH A 132 532 322 HOH HOH . G 5 HOH A 133 533 323 HOH HOH . G 5 HOH A 134 534 324 HOH HOH . G 5 HOH A 135 535 325 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NA _atom_site.label_atom_id NA _atom_site.label_comp_id NA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id F _atom_site.label_entity_id 4 _atom_site.Cartn_x -13.915 _atom_site.Cartn_y 7.717 _atom_site.Cartn_z 3.491 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 29.68 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id NA _atom_site.auth_comp_id NA _atom_site.auth_seq_id 305 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 263 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #