data_4LG5 # _model_server_result.job_id yZlt8dTJSjjJe_uXFI792g _model_server_result.datetime_utc '2024-12-01 01:41:17' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4lg5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":601}' # _entry.id 4LG5 # _exptl.entry_id 4LG5 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4LG5 _cell.length_a 60.834 _cell.length_b 65.904 _cell.length_c 146.231 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4LG5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N ? 4 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 B OD2 ASP 73 B ASP 243 1_555 D MG MG . B MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.39 ? metalc ? metalc2 B OD1 ASP 73 B ASP 243 1_555 E MG MG . B MG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.247 ? metalc ? metalc3 B OD1 ASP 73 B ASP 243 1_555 F MG MG . B MG 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.777 ? metalc ? metalc4 B OD1 ASP 262 B ASP 432 1_555 D MG MG . B MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.195 ? metalc ? metalc5 B OD2 ASP 262 B ASP 432 1_555 D MG MG . B MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.716 ? metalc ? metalc6 B OD1 ASP 322 B ASP 492 1_555 F MG MG . B MG 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.359 ? metalc ? metalc7 B OD2 ASP 322 B ASP 492 1_555 F MG MG . B MG 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.65 ? metalc ? metalc8 D MG MG . B MG 601 1_555 H O HOH . B HOH 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.711 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4LG5 _atom_sites.fract_transf_matrix[1][1] 0.016438 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015174 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006838 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 A1O A 1 900 900 A1O A1O . D 4 MG B 1 601 997 MG MG . E 4 MG B 1 602 998 MG MG . F 4 MG B 1 603 999 MG MG . G 5 HOH A 1 1001 1 HOH HOH . G 5 HOH A 2 1002 2 HOH HOH . G 5 HOH A 3 1003 4 HOH HOH . G 5 HOH A 4 1004 6 HOH HOH . G 5 HOH A 5 1005 10 HOH HOH . G 5 HOH A 6 1006 12 HOH HOH . G 5 HOH A 7 1007 18 HOH HOH . G 5 HOH A 8 1008 22 HOH HOH . G 5 HOH A 9 1009 25 HOH HOH . G 5 HOH A 10 1010 27 HOH HOH . G 5 HOH A 11 1011 34 HOH HOH . G 5 HOH A 12 1012 43 HOH HOH . G 5 HOH A 13 1013 53 HOH HOH . G 5 HOH A 14 1014 54 HOH HOH . G 5 HOH A 15 1015 55 HOH HOH . G 5 HOH A 16 1016 58 HOH HOH . H 5 HOH B 1 701 3 HOH HOH . H 5 HOH B 2 702 5 HOH HOH . H 5 HOH B 3 703 7 HOH HOH . H 5 HOH B 4 704 8 HOH HOH . H 5 HOH B 5 705 9 HOH HOH . H 5 HOH B 6 706 11 HOH HOH . H 5 HOH B 7 707 13 HOH HOH . H 5 HOH B 8 708 14 HOH HOH . H 5 HOH B 9 709 15 HOH HOH . H 5 HOH B 10 710 16 HOH HOH . H 5 HOH B 11 711 17 HOH HOH . H 5 HOH B 12 712 19 HOH HOH . H 5 HOH B 13 713 20 HOH HOH . H 5 HOH B 14 714 21 HOH HOH . H 5 HOH B 15 715 23 HOH HOH . H 5 HOH B 16 716 24 HOH HOH . H 5 HOH B 17 717 26 HOH HOH . H 5 HOH B 18 718 28 HOH HOH . H 5 HOH B 19 719 29 HOH HOH . H 5 HOH B 20 720 30 HOH HOH . H 5 HOH B 21 721 31 HOH HOH . H 5 HOH B 22 722 32 HOH HOH . H 5 HOH B 23 723 33 HOH HOH . H 5 HOH B 24 724 35 HOH HOH . H 5 HOH B 25 725 36 HOH HOH . H 5 HOH B 26 726 37 HOH HOH . H 5 HOH B 27 727 38 HOH HOH . H 5 HOH B 28 728 39 HOH HOH . H 5 HOH B 29 729 40 HOH HOH . H 5 HOH B 30 730 41 HOH HOH . H 5 HOH B 31 731 42 HOH HOH . H 5 HOH B 32 732 44 HOH HOH . H 5 HOH B 33 733 45 HOH HOH . H 5 HOH B 34 734 46 HOH HOH . H 5 HOH B 35 735 47 HOH HOH . H 5 HOH B 36 736 48 HOH HOH . H 5 HOH B 37 737 49 HOH HOH . H 5 HOH B 38 738 50 HOH HOH . H 5 HOH B 39 739 51 HOH HOH . H 5 HOH B 40 740 52 HOH HOH . H 5 HOH B 41 741 56 HOH HOH . H 5 HOH B 42 742 57 HOH HOH . H 5 HOH B 43 743 59 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 4 _atom_site.Cartn_x 17.495 _atom_site.Cartn_y -19.1 _atom_site.Cartn_z -33.246 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 3.05 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 601 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 282 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #