data_4LGG
#
_model_server_result.job_id            nGaSy5UqYv0mv74jF7GSYA 
_model_server_result.datetime_utc      '2024-11-13 20:56:44' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4lgg 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":601}' 
#
_entry.id    4LGG 
#
_exptl.entry_id    4LGG 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              295.382 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1-tert-butyl-3-(3-methylbenzyl)-1H-pyrazolo[3,4-d]pyrimidin-4-amine 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         89.98 
_cell.angle_beta          90.06 
_cell.angle_gamma         88.86 
_cell.entry_id            4LGG 
_cell.length_a            41.988 
_cell.length_b            55.815 
_cell.length_c            62.978 
_cell.Z_PDB               2 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4LGG 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,E 1 1 
B,D,F 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
_chem_comp.formula           'C17 H21 N5' 
_chem_comp.formula_weight    295.382 
_chem_comp.id                VGG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1-tert-butyl-3-(3-methylbenzyl)-1H-pyrazolo[3,4-d]pyrimidin-4-amine 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C20 C19 VGG sing 376 n n 
C19 C21 VGG sing 377 n n 
C19 C22 VGG sing 378 n n 
C19 N7 VGG sing 379 n n 
N7 N8 VGG sing 380 n y 
N7 C3 VGG sing 381 n y 
N8 C9 VGG doub 382 n y 
C3 N2 VGG sing 383 n y 
C3 C4 VGG doub 384 n y 
N2 C1 VGG doub 385 n y 
C1 N6 VGG sing 386 n y 
N6 C5 VGG doub 387 n y 
C5 N10 VGG sing 388 n n 
C5 C4 VGG sing 389 n y 
C4 C9 VGG sing 390 n y 
C9 C11 VGG sing 391 n n 
C11 C12 VGG sing 392 n n 
C12 C13 VGG sing 393 n y 
C12 C17 VGG doub 394 n y 
C13 C14 VGG doub 395 n y 
C17 C16 VGG sing 396 n y 
C16 C15 VGG doub 397 n y 
C15 C14 VGG sing 398 n y 
C14 C18 VGG sing 399 n n 
C20 H201 VGG sing 400 n n 
C20 H202 VGG sing 401 n n 
C20 H203 VGG sing 402 n n 
C21 H211 VGG sing 403 n n 
C21 H212 VGG sing 404 n n 
C21 H213 VGG sing 405 n n 
C22 H221 VGG sing 406 n n 
C22 H222 VGG sing 407 n n 
C22 H223 VGG sing 408 n n 
C1 H1 VGG sing 409 n n 
N10 H101 VGG sing 410 n n 
N10 H102 VGG sing 411 n n 
C11 H111 VGG sing 412 n n 
C11 H112 VGG sing 413 n n 
C13 H13 VGG sing 414 n n 
C17 H17 VGG sing 415 n n 
C16 H16 VGG sing 416 n n 
C15 H15 VGG sing 417 n n 
C18 H181 VGG sing 418 n n 
C18 H182 VGG sing 419 n n 
C18 H183 VGG sing 420 n n 
#
_atom_sites.entry_id                     4LGG 
_atom_sites.fract_transf_matrix[1][1]    0.023816 
_atom_sites.fract_transf_matrix[1][2]    -0.000474 
_atom_sites.fract_transf_matrix[1][3]    0.000025 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.01792 
_atom_sites.fract_transf_matrix[2][3]    -0.000007 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.015879 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 VGG A 1 601 1 VGG VGG . 
D 2 VGG B 1 601 1 VGG VGG . 
E 3 HOH A 1 701 14 HOH HOH . 
E 3 HOH A 2 702 16 HOH HOH . 
E 3 HOH A 3 703 17 HOH HOH . 
E 3 HOH A 4 704 18 HOH HOH . 
E 3 HOH A 5 705 20 HOH HOH . 
E 3 HOH A 6 706 22 HOH HOH . 
E 3 HOH A 7 707 23 HOH HOH . 
E 3 HOH A 8 708 24 HOH HOH . 
E 3 HOH A 9 709 25 HOH HOH . 
E 3 HOH A 10 710 26 HOH HOH . 
E 3 HOH A 11 711 28 HOH HOH . 
E 3 HOH A 12 712 29 HOH HOH . 
E 3 HOH A 13 713 31 HOH HOH . 
E 3 HOH A 14 714 32 HOH HOH . 
E 3 HOH A 15 715 33 HOH HOH . 
E 3 HOH A 16 716 34 HOH HOH . 
E 3 HOH A 17 717 35 HOH HOH . 
E 3 HOH A 18 718 36 HOH HOH . 
E 3 HOH A 19 719 37 HOH HOH . 
E 3 HOH A 20 720 38 HOH HOH . 
E 3 HOH A 21 721 39 HOH HOH . 
E 3 HOH A 22 722 40 HOH HOH . 
E 3 HOH A 23 723 41 HOH HOH . 
E 3 HOH A 24 724 42 HOH HOH . 
E 3 HOH A 25 725 44 HOH HOH . 
E 3 HOH A 26 726 45 HOH HOH . 
E 3 HOH A 27 727 46 HOH HOH . 
F 3 HOH B 1 701 27 HOH HOH . 
F 3 HOH B 2 702 1 HOH HOH . 
F 3 HOH B 3 703 2 HOH HOH . 
F 3 HOH B 4 704 3 HOH HOH . 
F 3 HOH B 5 705 4 HOH HOH . 
F 3 HOH B 6 706 5 HOH HOH . 
F 3 HOH B 7 707 6 HOH HOH . 
F 3 HOH B 8 708 7 HOH HOH . 
F 3 HOH B 9 709 8 HOH HOH . 
F 3 HOH B 10 710 9 HOH HOH . 
F 3 HOH B 11 711 10 HOH HOH . 
F 3 HOH B 12 712 11 HOH HOH . 
F 3 HOH B 13 713 12 HOH HOH . 
F 3 HOH B 14 714 13 HOH HOH . 
F 3 HOH B 15 715 15 HOH HOH . 
F 3 HOH B 16 716 19 HOH HOH . 
F 3 HOH B 17 717 43 HOH HOH . 
F 3 HOH B 18 718 47 HOH HOH . 
F 3 HOH B 19 719 48 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C20 VGG . . . D 2 -3.895 29.311 -40.88 1 27.34 ? C20 VGG 601 B 1 
HETATM 2 C C19 VGG . . . D 2 -2.551 29.511 -40.263 1 31.57 ? C19 VGG 601 B 1 
HETATM 3 C C21 VGG . . . D 2 -1.994 28.176 -39.89 1 29.09 ? C21 VGG 601 B 1 
HETATM 4 C C22 VGG . . . D 2 -1.653 30.164 -41.259 1 28.19 ? C22 VGG 601 B 1 
HETATM 5 N N7 VGG . . . D 2 -2.667 30.327 -39.087 1 22.65 ? N7 VGG 601 B 1 
HETATM 6 N N8 VGG . . . D 2 -3.824 30.76 -38.599 1 30.26 ? N8 VGG 601 B 1 
HETATM 7 C C3 VGG . . . D 2 -1.628 30.759 -38.311 1 17.83 ? C3 VGG 601 B 1 
HETATM 8 N N2 VGG . . . D 2 -0.267 30.577 -38.403 1 21.7 ? N2 VGG 601 B 1 
HETATM 9 C C1 VGG . . . D 2 0.571 31.111 -37.507 1 24.5 ? C1 VGG 601 B 1 
HETATM 10 N N6 VGG . . . D 2 0.106 31.85 -36.48 1 20.95 ? N6 VGG 601 B 1 
HETATM 11 C C5 VGG . . . D 2 -1.219 32.078 -36.319 1 20.14 ? C5 VGG 601 B 1 
HETATM 12 N N10 VGG . . . D 2 -1.594 32.873 -35.188 1 18.21 ? N10 VGG 601 B 1 
HETATM 13 C C4 VGG . . . D 2 -2.156 31.524 -37.255 1 19.77 ? C4 VGG 601 B 1 
HETATM 14 C C9 VGG . . . D 2 -3.601 31.49 -37.497 1 19.51 ? C9 VGG 601 B 1 
HETATM 15 C C11 VGG . . . D 2 -4.737 32.1 -36.737 1 26.83 ? C11 VGG 601 B 1 
HETATM 16 C C12 VGG . . . D 2 -4.518 33.548 -36.45 1 24.28 ? C12 VGG 601 B 1 
HETATM 17 C C13 VGG . . . D 2 -4.803 34.036 -35.182 1 25.47 ? C13 VGG 601 B 1 
HETATM 18 C C17 VGG . . . D 2 -4.051 34.405 -37.437 1 28.43 ? C17 VGG 601 B 1 
HETATM 19 C C16 VGG . . . D 2 -3.858 35.749 -37.148 1 26.56 ? C16 VGG 601 B 1 
HETATM 20 C C15 VGG . . . D 2 -4.139 36.235 -35.878 1 27.9 ? C15 VGG 601 B 1 
HETATM 21 C C14 VGG . . . D 2 -4.611 35.378 -34.895 1 29.01 ? C14 VGG 601 B 1 
HETATM 22 C C18 VGG . . . D 2 -4.916 35.892 -33.528 1 33.56 ? C18 VGG 601 B 1 
HETATM 23 H H201 VGG . . . D 2 -4.201 30.149 -41.27 1 32.81 ? H201 VGG 601 B 1 
HETATM 24 H H202 VGG . . . D 2 -3.833 28.634 -41.578 1 32.81 ? H202 VGG 601 B 1 
HETATM 25 H H203 VGG . . . D 2 -4.53 29.015 -40.203 1 32.81 ? H203 VGG 601 B 1 
HETATM 26 H H211 VGG . . . D 2 -2.089 27.562 -40.641 1 34.91 ? H211 VGG 601 B 1 
HETATM 27 H H212 VGG . . . D 2 -2.478 27.825 -39.122 1 34.91 ? H212 VGG 601 B 1 
HETATM 28 H H213 VGG . . . D 2 -1.051 28.267 -39.665 1 34.91 ? H213 VGG 601 B 1 
HETATM 29 H H221 VGG . . . D 2 -0.732 30.115 -40.947 1 33.83 ? H221 VGG 601 B 1 
HETATM 30 H H222 VGG . . . D 2 -1.91 31.097 -41.365 1 33.83 ? H222 VGG 601 B 1 
HETATM 31 H H223 VGG . . . D 2 -1.73 29.707 -42.116 1 33.83 ? H223 VGG 601 B 1 
HETATM 32 H H1 VGG . . . D 2 1.526 30.965 -37.598 1 29.4 ? H1 VGG 601 B 1 
HETATM 33 H H101 VGG . . . D 2 -2.448 33.176 -35.117 1 21.85 ? H101 VGG 601 B 1 
HETATM 34 H H102 VGG . . . D 2 -0.993 33.079 -34.545 1 21.85 ? H102 VGG 601 B 1 
HETATM 35 H H111 VGG . . . D 2 -5.544 32.018 -37.265 1 32.19 ? H111 VGG 601 B 1 
HETATM 36 H H112 VGG . . . D 2 -4.859 31.624 -35.898 1 32.19 ? H112 VGG 601 B 1 
HETATM 37 H H13 VGG . . . D 2 -5.132 33.437 -34.495 1 30.57 ? H13 VGG 601 B 1 
HETATM 38 H H17 VGG . . . D 2 -3.854 34.064 -38.322 1 34.12 ? H17 VGG 601 B 1 
HETATM 39 H H16 VGG . . . D 2 -3.528 36.349 -37.834 1 31.88 ? H16 VGG 601 B 1 
HETATM 40 H H15 VGG . . . D 2 -4.005 37.174 -35.679 1 33.48 ? H15 VGG 601 B 1 
HETATM 41 H H181 VGG . . . D 2 -5.037 36.858 -33.57 1 40.27 ? H181 VGG 601 B 1 
HETATM 42 H H182 VGG . . . D 2 -4.176 35.688 -32.929 1 40.27 ? H182 VGG 601 B 1 
HETATM 43 H H183 VGG . . . D 2 -5.735 35.481 -33.199 1 40.27 ? H183 VGG 601 B 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    17 
_model_server_stats.query_time_ms           264 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           43 
#