data_4LGH # _model_server_result.job_id LmQO3uHR_tisqH4Zqw0rSw _model_server_result.datetime_utc '2024-11-28 07:20:04' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4lgh # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":601}' # _entry.id 4LGH # _exptl.entry_id 4LGH _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 331.414 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1-tert-butyl-3-(naphthalen-1-ylmethyl)-1H-pyrazolo[3,4-d]pyrimidin-4-amine _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 100.38 _cell.angle_beta 91.01 _cell.angle_gamma 90.07 _cell.entry_id 4LGH _cell.length_a 42.264 _cell.length_b 62.654 _cell.length_c 74.325 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4LGH _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E 1 1 B,D,F 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'C20 H21 N5' _chem_comp.formula_weight 331.414 _chem_comp.id 0JN _chem_comp.mon_nstd_flag . _chem_comp.name 1-tert-butyl-3-(naphthalen-1-ylmethyl)-1H-pyrazolo[3,4-d]pyrimidin-4-amine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAE CAI 0JN doub 1 n y CAE CAF 0JN sing 2 n y CAI CAT 0JN sing 3 n y CAF CAK 0JN doub 4 n y CAT CAJ 0JN doub 5 n y CAT CAU 0JN sing 6 n y CAK CAU 0JN sing 7 n y CAJ CAG 0JN sing 8 n y CAU CAR 0JN doub 9 n y CAA CAY 0JN sing 10 n n CAB CAY 0JN sing 11 n n CAG CAH 0JN doub 12 n y CAY NAX 0JN sing 13 n n CAY CAC 0JN sing 14 n n CAR CAH 0JN sing 15 n y CAR CAM 0JN sing 16 n n NAP NAX 0JN sing 17 n y NAP CAS 0JN doub 18 n y NAX C4 0JN sing 19 n y CAS CAM 0JN sing 20 n n CAS C5 0JN sing 21 n y C4 N3 0JN doub 22 n y C4 C5 0JN sing 23 n y N3 C2 0JN sing 24 n y C5 C6 0JN doub 25 n y C2 N1 0JN doub 26 n y C6 N1 0JN sing 27 n y C6 NAD 0JN sing 28 n n C2 H1 0JN sing 29 n n CAA H2 0JN sing 30 n n CAA H3 0JN sing 31 n n CAA H4 0JN sing 32 n n CAB H5 0JN sing 33 n n CAB H6 0JN sing 34 n n CAB H7 0JN sing 35 n n CAE H8 0JN sing 36 n n CAF H9 0JN sing 37 n n CAG H10 0JN sing 38 n n CAH H11 0JN sing 39 n n CAI H12 0JN sing 40 n n CAJ H13 0JN sing 41 n n CAC H14 0JN sing 42 n n CAC H15 0JN sing 43 n n CAC H16 0JN sing 44 n n NAD H17 0JN sing 45 n n NAD H18 0JN sing 46 n n CAM H19 0JN sing 47 n n CAM H20 0JN sing 48 n n CAK H21 0JN sing 49 n n # _atom_sites.entry_id 4LGH _atom_sites.fract_transf_matrix[1][1] 0.023661 _atom_sites.fract_transf_matrix[1][2] 0.000029 _atom_sites.fract_transf_matrix[1][3] 0.000429 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015961 _atom_sites.fract_transf_matrix[2][3] 0.002924 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013681 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 0JN A 1 601 1 0JN 0JN . D 2 0JN B 1 601 1 0JN 0JN . E 3 HOH A 1 701 2 HOH HOH . E 3 HOH A 2 702 4 HOH HOH . E 3 HOH A 3 703 5 HOH HOH . E 3 HOH A 4 704 6 HOH HOH . E 3 HOH A 5 705 7 HOH HOH . E 3 HOH A 6 706 8 HOH HOH . E 3 HOH A 7 707 9 HOH HOH . E 3 HOH A 8 708 10 HOH HOH . E 3 HOH A 9 709 11 HOH HOH . E 3 HOH A 10 710 12 HOH HOH . E 3 HOH A 11 711 13 HOH HOH . E 3 HOH A 12 712 14 HOH HOH . E 3 HOH A 13 713 15 HOH HOH . E 3 HOH A 14 714 16 HOH HOH . E 3 HOH A 15 715 17 HOH HOH . E 3 HOH A 16 716 18 HOH HOH . E 3 HOH A 17 717 19 HOH HOH . E 3 HOH A 18 718 20 HOH HOH . E 3 HOH A 19 719 21 HOH HOH . E 3 HOH A 20 720 22 HOH HOH . E 3 HOH A 21 721 23 HOH HOH . E 3 HOH A 22 722 39 HOH HOH . F 3 HOH B 1 701 1 HOH HOH . F 3 HOH B 2 702 24 HOH HOH . F 3 HOH B 3 703 25 HOH HOH . F 3 HOH B 4 704 26 HOH HOH . F 3 HOH B 5 705 27 HOH HOH . F 3 HOH B 6 706 28 HOH HOH . F 3 HOH B 7 707 29 HOH HOH . F 3 HOH B 8 708 30 HOH HOH . F 3 HOH B 9 709 31 HOH HOH . F 3 HOH B 10 710 32 HOH HOH . F 3 HOH B 11 711 34 HOH HOH . F 3 HOH B 12 712 35 HOH HOH . F 3 HOH B 13 713 36 HOH HOH . F 3 HOH B 14 714 37 HOH HOH . F 3 HOH B 15 715 38 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 0JN . . . C 2 -8.232 4.826 -7.354 1 43.7 ? N1 0JN 601 A 1 HETATM 2 C C2 0JN . . . C 2 -8.644 5.98 -6.713 1 45.94 ? C2 0JN 601 A 1 HETATM 3 N N3 0JN . . . C 2 -7.754 6.895 -6.29 1 40.35 ? N3 0JN 601 A 1 HETATM 4 C C4 0JN . . . C 2 -6.399 6.73 -6.482 1 37.45 ? C4 0JN 601 A 1 HETATM 5 C C5 0JN . . . C 2 -5.942 5.549 -7.138 1 36.19 ? C5 0JN 601 A 1 HETATM 6 C C6 0JN . . . C 2 -6.914 4.589 -7.576 1 44.56 ? C6 0JN 601 A 1 HETATM 7 C CAA 0JN . . . C 2 -3.962 9.444 -5.524 1 30.97 ? CAA 0JN 601 A 1 HETATM 8 C CAB 0JN . . . C 2 -6.269 9.748 -6.093 1 41.35 ? CAB 0JN 601 A 1 HETATM 9 C CAE 0JN . . . C 2 -2.352 0.921 -11.155 1 72.54 ? CAE 0JN 601 A 1 HETATM 10 C CAF 0JN . . . C 2 -2.145 1.093 -9.776 1 64.66 ? CAF 0JN 601 A 1 HETATM 11 C CAG 0JN . . . C 2 -4.491 5.343 -11.427 1 60.23 ? CAG 0JN 601 A 1 HETATM 12 C CAH 0JN . . . C 2 -4.3 5.53 -10.082 1 51.01 ? CAH 0JN 601 A 1 HETATM 13 C CAI 0JN . . . C 2 -2.984 1.936 -11.906 1 65.47 ? CAI 0JN 601 A 1 HETATM 14 C CAJ 0JN . . . C 2 -4.052 4.135 -12.054 1 67.56 ? CAJ 0JN 601 A 1 HETATM 15 C CAR 0JN . . . C 2 -3.648 4.5 -9.286 1 50.75 ? CAR 0JN 601 A 1 HETATM 16 C CAS 0JN . . . C 2 -4.471 5.704 -7.166 1 45.37 ? CAS 0JN 601 A 1 HETATM 17 C CAT 0JN . . . C 2 -3.399 3.097 -11.266 1 74.78 ? CAT 0JN 601 A 1 HETATM 18 N NAX 0JN . . . C 2 -5.296 7.487 -6.157 1 54.78 ? NAX 0JN 601 A 1 HETATM 19 C CAY 0JN . . . C 2 -5.308 8.828 -5.443 1 52.28 ? CAY 0JN 601 A 1 HETATM 20 C CAC 0JN . . . C 2 -5.697 8.621 -3.963 1 31 ? CAC 0JN 601 A 1 HETATM 21 N NAP 0JN . . . C 2 -4.147 6.866 -6.569 1 42.14 ? NAP 0JN 601 A 1 HETATM 22 N NAD 0JN . . . C 2 -6.55 3.373 -8.248 1 48.87 ? NAD 0JN 601 A 1 HETATM 23 C CAM 0JN . . . C 2 -3.441 4.734 -7.747 1 58.77 ? CAM 0JN 601 A 1 HETATM 24 C CAU 0JN . . . C 2 -3.201 3.273 -9.919 1 67.77 ? CAU 0JN 601 A 1 HETATM 25 C CAK 0JN . . . C 2 -2.542 2.212 -9.15 1 59.11 ? CAK 0JN 601 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 253 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 25 #