data_4LGP # _model_server_result.job_id 0qz0fcbDKY4IQL_v_CX2Zg _model_server_result.datetime_utc '2024-11-05 00:39:59' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4lgp # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":302}' # _entry.id 4LGP # _exptl.entry_id 4LGP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4LGP _cell.length_a 90.168 _cell.length_b 92.443 _cell.length_c 93.317 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4LGP _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,G,H 1 1 C,D,I,J 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 B SG CYS 22 B CYS 22 1_555 B SG CYS 96 B CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.014 ? disulf ? disulf2 B SG CYS 50 B CYS 50 1_555 B SG CYS 100 B CYS 100 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? disulf ? disulf3 D SG CYS 22 D CYS 22 1_555 D SG CYS 96 D CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf4 D SG CYS 50 D CYS 50 1_555 D SG CYS 100 D CYS 100 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 4LGP _atom_sites.fract_transf_matrix[1][1] 0.01109 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010817 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010716 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 CL A 1 301 1 CL CL . F 4 EDO A 1 302 2 EDO EDO . G 5 HOH A 1 401 1 HOH HOH . G 5 HOH A 2 402 2 HOH HOH . G 5 HOH A 3 403 3 HOH HOH . G 5 HOH A 4 404 6 HOH HOH . G 5 HOH A 5 405 7 HOH HOH . G 5 HOH A 6 406 9 HOH HOH . G 5 HOH A 7 407 12 HOH HOH . G 5 HOH A 8 408 15 HOH HOH . G 5 HOH A 9 409 17 HOH HOH . G 5 HOH A 10 410 23 HOH HOH . G 5 HOH A 11 411 28 HOH HOH . G 5 HOH A 12 412 29 HOH HOH . G 5 HOH A 13 413 30 HOH HOH . G 5 HOH A 14 414 32 HOH HOH . G 5 HOH A 15 415 36 HOH HOH . G 5 HOH A 16 416 39 HOH HOH . G 5 HOH A 17 417 40 HOH HOH . G 5 HOH A 18 418 42 HOH HOH . G 5 HOH A 19 419 51 HOH HOH . G 5 HOH A 20 420 52 HOH HOH . G 5 HOH A 21 421 53 HOH HOH . G 5 HOH A 22 422 54 HOH HOH . G 5 HOH A 23 423 55 HOH HOH . G 5 HOH A 24 424 56 HOH HOH . G 5 HOH A 25 425 57 HOH HOH . G 5 HOH A 26 426 61 HOH HOH . G 5 HOH A 27 427 62 HOH HOH . G 5 HOH A 28 428 67 HOH HOH . G 5 HOH A 29 429 70 HOH HOH . G 5 HOH A 30 430 72 HOH HOH . G 5 HOH A 31 431 77 HOH HOH . G 5 HOH A 32 432 78 HOH HOH . G 5 HOH A 33 433 82 HOH HOH . G 5 HOH A 34 434 83 HOH HOH . G 5 HOH A 35 435 84 HOH HOH . G 5 HOH A 36 436 93 HOH HOH . G 5 HOH A 37 437 95 HOH HOH . G 5 HOH A 38 438 96 HOH HOH . G 5 HOH A 39 439 98 HOH HOH . G 5 HOH A 40 440 102 HOH HOH . G 5 HOH A 41 441 104 HOH HOH . G 5 HOH A 42 442 105 HOH HOH . G 5 HOH A 43 443 120 HOH HOH . G 5 HOH A 44 444 121 HOH HOH . G 5 HOH A 45 445 123 HOH HOH . G 5 HOH A 46 446 124 HOH HOH . G 5 HOH A 47 447 126 HOH HOH . G 5 HOH A 48 448 132 HOH HOH . G 5 HOH A 49 449 133 HOH HOH . H 5 HOH B 1 201 20 HOH HOH . H 5 HOH B 2 202 33 HOH HOH . H 5 HOH B 3 203 37 HOH HOH . H 5 HOH B 4 204 48 HOH HOH . H 5 HOH B 5 205 60 HOH HOH . H 5 HOH B 6 206 69 HOH HOH . H 5 HOH B 7 207 74 HOH HOH . H 5 HOH B 8 208 79 HOH HOH . H 5 HOH B 9 209 80 HOH HOH . H 5 HOH B 10 210 91 HOH HOH . H 5 HOH B 11 211 112 HOH HOH . H 5 HOH B 12 212 118 HOH HOH . H 5 HOH B 13 213 137 HOH HOH . H 5 HOH B 14 214 139 HOH HOH . I 5 HOH C 1 301 4 HOH HOH . I 5 HOH C 2 302 5 HOH HOH . I 5 HOH C 3 303 8 HOH HOH . I 5 HOH C 4 304 11 HOH HOH . I 5 HOH C 5 305 14 HOH HOH . I 5 HOH C 6 306 16 HOH HOH . I 5 HOH C 7 307 18 HOH HOH . I 5 HOH C 8 308 19 HOH HOH . I 5 HOH C 9 309 22 HOH HOH . I 5 HOH C 10 310 26 HOH HOH . I 5 HOH C 11 311 27 HOH HOH . I 5 HOH C 12 312 31 HOH HOH . I 5 HOH C 13 313 34 HOH HOH . I 5 HOH C 14 314 38 HOH HOH . I 5 HOH C 15 315 41 HOH HOH . I 5 HOH C 16 316 44 HOH HOH . I 5 HOH C 17 317 47 HOH HOH . I 5 HOH C 18 318 49 HOH HOH . I 5 HOH C 19 319 50 HOH HOH . I 5 HOH C 20 320 58 HOH HOH . I 5 HOH C 21 321 59 HOH HOH . I 5 HOH C 22 322 63 HOH HOH . I 5 HOH C 23 323 65 HOH HOH . I 5 HOH C 24 324 66 HOH HOH . I 5 HOH C 25 325 68 HOH HOH . I 5 HOH C 26 326 71 HOH HOH . I 5 HOH C 27 327 73 HOH HOH . I 5 HOH C 28 328 75 HOH HOH . I 5 HOH C 29 329 76 HOH HOH . I 5 HOH C 30 330 81 HOH HOH . I 5 HOH C 31 331 87 HOH HOH . I 5 HOH C 32 332 88 HOH HOH . I 5 HOH C 33 333 89 HOH HOH . I 5 HOH C 34 334 94 HOH HOH . I 5 HOH C 35 335 97 HOH HOH . I 5 HOH C 36 336 99 HOH HOH . I 5 HOH C 37 337 100 HOH HOH . I 5 HOH C 38 338 106 HOH HOH . I 5 HOH C 39 339 107 HOH HOH . I 5 HOH C 40 340 108 HOH HOH . I 5 HOH C 41 341 110 HOH HOH . I 5 HOH C 42 342 111 HOH HOH . I 5 HOH C 43 343 114 HOH HOH . I 5 HOH C 44 344 115 HOH HOH . I 5 HOH C 45 345 116 HOH HOH . I 5 HOH C 46 346 119 HOH HOH . I 5 HOH C 47 347 122 HOH HOH . I 5 HOH C 48 348 127 HOH HOH . I 5 HOH C 49 349 128 HOH HOH . I 5 HOH C 50 350 129 HOH HOH . I 5 HOH C 51 351 130 HOH HOH . I 5 HOH C 52 352 131 HOH HOH . I 5 HOH C 53 353 135 HOH HOH . I 5 HOH C 54 354 138 HOH HOH . I 5 HOH C 55 355 140 HOH HOH . J 5 HOH D 1 201 10 HOH HOH . J 5 HOH D 2 202 13 HOH HOH . J 5 HOH D 3 203 21 HOH HOH . J 5 HOH D 4 204 24 HOH HOH . J 5 HOH D 5 205 35 HOH HOH . J 5 HOH D 6 206 45 HOH HOH . J 5 HOH D 7 207 46 HOH HOH . J 5 HOH D 8 208 64 HOH HOH . J 5 HOH D 9 209 85 HOH HOH . J 5 HOH D 10 210 86 HOH HOH . J 5 HOH D 11 211 90 HOH HOH . J 5 HOH D 12 212 92 HOH HOH . J 5 HOH D 13 213 101 HOH HOH . J 5 HOH D 14 214 103 HOH HOH . J 5 HOH D 15 215 109 HOH HOH . J 5 HOH D 16 216 117 HOH HOH . J 5 HOH D 17 217 125 HOH HOH . J 5 HOH D 18 218 136 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . F 4 -6.105 10.429 22.727 1 31.88 ? C1 EDO 302 A 1 HETATM 2 O O1 EDO . . . F 4 -5.37 9.219 22.947 1 31.38 ? O1 EDO 302 A 1 HETATM 3 C C2 EDO . . . F 4 -7.573 10.095 22.503 1 32.16 ? C2 EDO 302 A 1 HETATM 4 O O2 EDO . . . F 4 -7.748 9.516 21.202 1 34.79 ? O2 EDO 302 A 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 19 _model_server_stats.query_time_ms 339 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 4 #