data_4LH7 # _model_server_result.job_id T9mm7BpY7NVlLit7eAwgWA _model_server_result.datetime_utc '2024-12-24 18:25:32' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4lh7 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":403}' # _entry.id 4LH7 # _exptl.entry_id 4LH7 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 22.99 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SODIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4LH7 _cell.length_a 48.838 _cell.length_b 105.025 _cell.length_c 136.085 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4LH7 _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O ALA 218 A ALA 218 1_555 D NA NA . A NA 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.446 ? metalc ? metalc2 A O ARG 220 A ARG 220 1_555 D NA NA . A NA 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.129 ? metalc ? metalc3 A O GLU 276 A GLU 276 1_555 E NA NA . A NA 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.365 ? metalc ? metalc4 A OG SER 279 A SER 279 1_555 E NA NA . A NA 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.393 ? metalc ? metalc5 D NA NA . A NA 403 1_555 F O HOH . A HOH 535 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.54 ? metalc ? metalc6 D NA NA . A NA 403 1_555 F O HOH . A HOH 562 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.815 ? metalc ? metalc7 D NA NA . A NA 403 1_555 F O HOH . A HOH 596 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.193 ? metalc ? metalc8 D NA NA . A NA 403 1_555 F O HOH . A HOH 627 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.246 ? metalc ? metalc9 E NA NA . A NA 404 1_555 F O HOH . A HOH 543 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.441 ? metalc ? metalc10 E NA NA . A NA 404 1_555 F O HOH . A HOH 587 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.413 ? # _chem_comp.formula 'Na 1' _chem_comp.formula_weight 22.99 _chem_comp.id NA _chem_comp.mon_nstd_flag . _chem_comp.name 'SODIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4LH7 _atom_sites.fract_transf_matrix[1][1] 0.020476 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009522 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007348 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 1X8 A 1 401 1 1X8 INH . C 3 NMN A 1 402 1 NMN NMN . D 4 NA A 1 403 1 NA NA . E 4 NA A 1 404 1 NA NA . F 5 HOH A 1 501 1 HOH HOH . F 5 HOH A 2 502 4 HOH HOH . F 5 HOH A 3 503 5 HOH HOH . F 5 HOH A 4 504 6 HOH HOH . F 5 HOH A 5 505 9 HOH HOH . F 5 HOH A 6 506 10 HOH HOH . F 5 HOH A 7 507 11 HOH HOH . F 5 HOH A 8 508 12 HOH HOH . F 5 HOH A 9 509 13 HOH HOH . F 5 HOH A 10 510 14 HOH HOH . F 5 HOH A 11 511 15 HOH HOH . F 5 HOH A 12 512 16 HOH HOH . F 5 HOH A 13 513 17 HOH HOH . F 5 HOH A 14 514 18 HOH HOH . F 5 HOH A 15 515 19 HOH HOH . F 5 HOH A 16 516 20 HOH HOH . F 5 HOH A 17 517 23 HOH HOH . F 5 HOH A 18 518 24 HOH HOH . F 5 HOH A 19 519 25 HOH HOH . F 5 HOH A 20 520 26 HOH HOH . F 5 HOH A 21 521 27 HOH HOH . F 5 HOH A 22 522 28 HOH HOH . F 5 HOH A 23 523 29 HOH HOH . F 5 HOH A 24 524 30 HOH HOH . F 5 HOH A 25 525 31 HOH HOH . F 5 HOH A 26 526 32 HOH HOH . F 5 HOH A 27 527 33 HOH HOH . F 5 HOH A 28 528 34 HOH HOH . F 5 HOH A 29 529 36 HOH HOH . F 5 HOH A 30 530 37 HOH HOH . F 5 HOH A 31 531 38 HOH HOH . F 5 HOH A 32 532 41 HOH HOH . F 5 HOH A 33 533 43 HOH HOH . F 5 HOH A 34 534 45 HOH HOH . F 5 HOH A 35 535 47 HOH HOH . F 5 HOH A 36 536 48 HOH HOH . F 5 HOH A 37 537 49 HOH HOH . F 5 HOH A 38 538 50 HOH HOH . F 5 HOH A 39 539 51 HOH HOH . F 5 HOH A 40 540 52 HOH HOH . F 5 HOH A 41 541 53 HOH HOH . F 5 HOH A 42 542 56 HOH HOH . F 5 HOH A 43 543 59 HOH HOH . F 5 HOH A 44 544 60 HOH HOH . F 5 HOH A 45 545 61 HOH HOH . F 5 HOH A 46 546 62 HOH HOH . F 5 HOH A 47 547 63 HOH HOH . F 5 HOH A 48 548 64 HOH HOH . F 5 HOH A 49 549 65 HOH HOH . F 5 HOH A 50 550 69 HOH HOH . F 5 HOH A 51 551 70 HOH HOH . F 5 HOH A 52 552 71 HOH HOH . F 5 HOH A 53 553 72 HOH HOH . F 5 HOH A 54 554 73 HOH HOH . F 5 HOH A 55 555 74 HOH HOH . F 5 HOH A 56 556 75 HOH HOH . F 5 HOH A 57 557 79 HOH HOH . F 5 HOH A 58 558 80 HOH HOH . F 5 HOH A 59 559 81 HOH HOH . F 5 HOH A 60 560 82 HOH HOH . F 5 HOH A 61 561 83 HOH HOH . F 5 HOH A 62 562 84 HOH HOH . F 5 HOH A 63 563 85 HOH HOH . F 5 HOH A 64 564 86 HOH HOH . F 5 HOH A 65 565 87 HOH HOH . F 5 HOH A 66 566 88 HOH HOH . F 5 HOH A 67 567 91 HOH HOH . F 5 HOH A 68 568 93 HOH HOH . F 5 HOH A 69 569 94 HOH HOH . F 5 HOH A 70 570 97 HOH HOH . F 5 HOH A 71 571 99 HOH HOH . F 5 HOH A 72 572 100 HOH HOH . F 5 HOH A 73 573 102 HOH HOH . F 5 HOH A 74 574 104 HOH HOH . F 5 HOH A 75 575 105 HOH HOH . F 5 HOH A 76 576 107 HOH HOH . F 5 HOH A 77 577 108 HOH HOH . F 5 HOH A 78 578 109 HOH HOH . F 5 HOH A 79 579 110 HOH HOH . F 5 HOH A 80 580 111 HOH HOH . F 5 HOH A 81 581 112 HOH HOH . F 5 HOH A 82 582 114 HOH HOH . F 5 HOH A 83 583 115 HOH HOH . F 5 HOH A 84 584 116 HOH HOH . F 5 HOH A 85 585 117 HOH HOH . F 5 HOH A 86 586 118 HOH HOH . F 5 HOH A 87 587 119 HOH HOH . F 5 HOH A 88 588 120 HOH HOH . F 5 HOH A 89 589 122 HOH HOH . F 5 HOH A 90 590 123 HOH HOH . F 5 HOH A 91 591 127 HOH HOH . F 5 HOH A 92 592 129 HOH HOH . F 5 HOH A 93 593 130 HOH HOH . F 5 HOH A 94 594 132 HOH HOH . F 5 HOH A 95 595 134 HOH HOH . F 5 HOH A 96 596 136 HOH HOH . F 5 HOH A 97 597 137 HOH HOH . F 5 HOH A 98 598 138 HOH HOH . F 5 HOH A 99 599 139 HOH HOH . F 5 HOH A 100 600 140 HOH HOH . F 5 HOH A 101 601 141 HOH HOH . F 5 HOH A 102 602 142 HOH HOH . F 5 HOH A 103 603 143 HOH HOH . F 5 HOH A 104 604 144 HOH HOH . F 5 HOH A 105 605 145 HOH HOH . F 5 HOH A 106 606 146 HOH HOH . F 5 HOH A 107 607 147 HOH HOH . F 5 HOH A 108 608 148 HOH HOH . F 5 HOH A 109 609 150 HOH HOH . F 5 HOH A 110 610 153 HOH HOH . F 5 HOH A 111 611 154 HOH HOH . F 5 HOH A 112 612 155 HOH HOH . F 5 HOH A 113 613 156 HOH HOH . F 5 HOH A 114 614 158 HOH HOH . F 5 HOH A 115 615 160 HOH HOH . F 5 HOH A 116 616 161 HOH HOH . F 5 HOH A 117 617 168 HOH HOH . F 5 HOH A 118 618 169 HOH HOH . F 5 HOH A 119 619 170 HOH HOH . F 5 HOH A 120 620 171 HOH HOH . F 5 HOH A 121 621 172 HOH HOH . F 5 HOH A 122 622 173 HOH HOH . F 5 HOH A 123 623 174 HOH HOH . F 5 HOH A 124 624 175 HOH HOH . F 5 HOH A 125 625 176 HOH HOH . F 5 HOH A 126 626 177 HOH HOH . F 5 HOH A 127 627 178 HOH HOH . F 5 HOH A 128 628 179 HOH HOH . F 5 HOH A 129 629 180 HOH HOH . F 5 HOH A 130 630 181 HOH HOH . F 5 HOH A 131 631 182 HOH HOH . F 5 HOH A 132 632 183 HOH HOH . F 5 HOH A 133 633 184 HOH HOH . F 5 HOH A 134 634 185 HOH HOH . F 5 HOH A 135 635 186 HOH HOH . F 5 HOH A 136 636 187 HOH HOH . F 5 HOH A 137 637 188 HOH HOH . F 5 HOH A 138 638 189 HOH HOH . F 5 HOH A 139 639 190 HOH HOH . F 5 HOH A 140 640 191 HOH HOH . F 5 HOH A 141 641 192 HOH HOH . F 5 HOH A 142 642 193 HOH HOH . F 5 HOH A 143 643 194 HOH HOH . F 5 HOH A 144 644 195 HOH HOH . F 5 HOH A 145 645 196 HOH HOH . F 5 HOH A 146 646 197 HOH HOH . F 5 HOH A 147 647 198 HOH HOH . F 5 HOH A 148 648 199 HOH HOH . F 5 HOH A 149 649 200 HOH HOH . F 5 HOH A 150 650 201 HOH HOH . F 5 HOH A 151 651 202 HOH HOH . F 5 HOH A 152 652 203 HOH HOH . F 5 HOH A 153 653 204 HOH HOH . F 5 HOH A 154 654 205 HOH HOH . F 5 HOH A 155 655 206 HOH HOH . F 5 HOH A 156 656 207 HOH HOH . F 5 HOH A 157 657 208 HOH HOH . F 5 HOH A 158 658 209 HOH HOH . F 5 HOH A 159 659 210 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NA _atom_site.label_atom_id NA _atom_site.label_comp_id NA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 4 _atom_site.Cartn_x 8.716 _atom_site.Cartn_y 51.794 _atom_site.Cartn_z 11.048 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 39.97 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id NA _atom_site.auth_comp_id NA _atom_site.auth_seq_id 403 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 18 _model_server_stats.create_model_time_ms 28 _model_server_stats.query_time_ms 365 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #