data_4LI5
#
_model_server_result.job_id            jTp9e_ojYHq_8yc0ckne1A 
_model_server_result.datetime_utc      '2024-12-26 11:52:52' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4li5 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":1101}' 
#
_entry.id    4LI5 
#
_exptl.entry_id    4LI5 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              421.88 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            N-(3-{[5-chloro-4-(1H-indol-3-yl)pyrimidin-2-yl]amino}-4-methoxyphenyl)propanamide 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4LI5 
_cell.length_a            144.892 
_cell.length_b            144.892 
_cell.length_c            144.892 
_cell.Z_PDB               24 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4LI5 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        197 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'I 2 3' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
PISA dimeric 2 software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,C,D 1 1 
A,B,C,D 2 1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_655 -x+1,-y,z -1 0 0 0 -1 0 0 0 1 144.892 0 0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C22 H20 Cl N5 O2' 
_chem_comp.formula_weight    421.88 
_chem_comp.id                1WY 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              N-(3-{[5-chloro-4-(1H-indol-3-yl)pyrimidin-2-yl]amino}-4-methoxyphenyl)propanamide 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
CL1 C5 1WY sing 1 n n 
N25 C23 1WY sing 2 n y 
N25 C26 1WY sing 3 n y 
C23 C22 1WY doub 4 n y 
C26 C29 1WY doub 5 n y 
C26 C24 1WY sing 6 n y 
C29 C30 1WY sing 7 n y 
C5 C3 1WY doub 8 n y 
C5 C6 1WY sing 9 n y 
C22 C24 1WY sing 10 n y 
C22 C3 1WY sing 11 n n 
C24 C27 1WY doub 12 n y 
C3 N1 1WY sing 13 n y 
C6 N4 1WY doub 14 n y 
C30 C28 1WY doub 15 n y 
C27 C28 1WY sing 16 n y 
N1 C2 1WY doub 17 n y 
N4 C2 1WY sing 18 n y 
C2 N7 1WY sing 19 n n 
O18 C17 1WY doub 20 n n 
N7 C8 1WY sing 21 n n 
C19 C20 1WY sing 22 n n 
C19 C17 1WY sing 23 n n 
C17 N16 1WY sing 24 n n 
C9 C8 1WY doub 25 n y 
C9 C11 1WY sing 26 n y 
C8 C10 1WY sing 27 n y 
N16 C11 1WY sing 28 n n 
C11 C13 1WY doub 29 n y 
C10 O14 1WY sing 30 n n 
C10 C12 1WY doub 31 n y 
O14 C15 1WY sing 32 n n 
C13 C12 1WY sing 33 n y 
C6 H1 1WY sing 34 n n 
C12 H2 1WY sing 35 n n 
C15 H3 1WY sing 36 n n 
C15 H4 1WY sing 37 n n 
C15 H5 1WY sing 38 n n 
C19 H6 1WY sing 39 n n 
C19 H7 1WY sing 40 n n 
C23 H8 1WY sing 41 n n 
C27 H9 1WY sing 42 n n 
C30 H10 1WY sing 43 n n 
C28 H11 1WY sing 44 n n 
C29 H12 1WY sing 45 n n 
N25 H13 1WY sing 46 n n 
N7 H14 1WY sing 47 n n 
C13 H15 1WY sing 48 n n 
C9 H16 1WY sing 49 n n 
N16 H17 1WY sing 50 n n 
C20 H18 1WY sing 51 n n 
C20 H19 1WY sing 52 n n 
C20 H20 1WY sing 53 n n 
#
_atom_sites.entry_id                     4LI5 
_atom_sites.fract_transf_matrix[1][1]    0.006902 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.006902 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006902 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 1WY A 1 1101 1101 1WY 1WY . 
C 3 NA A 1 1102 1102 NA NA . 
D 4 HOH A 1 1201 1201 HOH HOH . 
D 4 HOH A 2 1202 1202 HOH HOH . 
D 4 HOH A 3 1203 1203 HOH HOH . 
D 4 HOH A 4 1204 1204 HOH HOH . 
D 4 HOH A 5 1205 1205 HOH HOH . 
D 4 HOH A 6 1206 1206 HOH HOH . 
D 4 HOH A 7 1207 1207 HOH HOH . 
D 4 HOH A 8 1208 1208 HOH HOH . 
D 4 HOH A 9 1209 1209 HOH HOH . 
D 4 HOH A 10 1210 1210 HOH HOH . 
D 4 HOH A 11 1211 1211 HOH HOH . 
D 4 HOH A 12 1212 1212 HOH HOH . 
D 4 HOH A 13 1213 1213 HOH HOH . 
D 4 HOH A 14 1214 1214 HOH HOH . 
D 4 HOH A 15 1215 1215 HOH HOH . 
D 4 HOH A 16 1216 1216 HOH HOH . 
D 4 HOH A 17 1217 1217 HOH HOH . 
D 4 HOH A 18 1218 1218 HOH HOH . 
D 4 HOH A 19 1219 1219 HOH HOH . 
D 4 HOH A 20 1220 1220 HOH HOH . 
D 4 HOH A 21 1221 1221 HOH HOH . 
D 4 HOH A 22 1222 1222 HOH HOH . 
D 4 HOH A 23 1223 1223 HOH HOH . 
D 4 HOH A 24 1224 1224 HOH HOH . 
D 4 HOH A 25 1225 1225 HOH HOH . 
D 4 HOH A 26 1226 1226 HOH HOH . 
D 4 HOH A 27 1227 1227 HOH HOH . 
D 4 HOH A 28 1228 1228 HOH HOH . 
D 4 HOH A 29 1229 1229 HOH HOH . 
D 4 HOH A 30 1230 1230 HOH HOH . 
D 4 HOH A 31 1231 1231 HOH HOH . 
D 4 HOH A 32 1232 1232 HOH HOH . 
D 4 HOH A 33 1233 1233 HOH HOH . 
D 4 HOH A 34 1234 1234 HOH HOH . 
D 4 HOH A 35 1235 1235 HOH HOH . 
D 4 HOH A 36 1236 1236 HOH HOH . 
D 4 HOH A 37 1237 1237 HOH HOH . 
D 4 HOH A 38 1238 1238 HOH HOH . 
D 4 HOH A 39 1239 1239 HOH HOH . 
D 4 HOH A 40 1240 1240 HOH HOH . 
D 4 HOH A 41 1241 1241 HOH HOH . 
D 4 HOH A 42 1242 1242 HOH HOH . 
D 4 HOH A 43 1243 1243 HOH HOH . 
D 4 HOH A 44 1244 1244 HOH HOH . 
D 4 HOH A 45 1245 1245 HOH HOH . 
D 4 HOH A 46 1246 1246 HOH HOH . 
D 4 HOH A 47 1247 1247 HOH HOH . 
D 4 HOH A 48 1248 1248 HOH HOH . 
D 4 HOH A 49 1249 1249 HOH HOH . 
D 4 HOH A 50 1250 1250 HOH HOH . 
D 4 HOH A 51 1251 1251 HOH HOH . 
D 4 HOH A 52 1252 1252 HOH HOH . 
D 4 HOH A 53 1253 1253 HOH HOH . 
D 4 HOH A 54 1254 1254 HOH HOH . 
D 4 HOH A 55 1255 1255 HOH HOH . 
D 4 HOH A 56 1256 1256 HOH HOH . 
D 4 HOH A 57 1257 1257 HOH HOH . 
D 4 HOH A 58 1258 1258 HOH HOH . 
D 4 HOH A 59 1259 1259 HOH HOH . 
D 4 HOH A 60 1260 1260 HOH HOH . 
D 4 HOH A 61 1261 1261 HOH HOH . 
D 4 HOH A 62 1262 1262 HOH HOH . 
D 4 HOH A 63 1263 1263 HOH HOH . 
D 4 HOH A 64 1264 1264 HOH HOH . 
D 4 HOH A 65 1265 1265 HOH HOH . 
D 4 HOH A 66 1266 1266 HOH HOH . 
D 4 HOH A 67 1267 1267 HOH HOH . 
D 4 HOH A 68 1268 1268 HOH HOH . 
D 4 HOH A 69 1269 1269 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C2 1WY . . . B 2 53.182 -0.212 -19.231 1 43.29 ? C2 1WY 1101 A 1 
HETATM 2 C C3 1WY . . . B 2 52.523 0.814 -21.284 1 45.99 ? C3 1WY 1101 A 1 
HETATM 3 C C5 1WY . . . B 2 53.428 -0.008 -21.944 1 48.84 ? C5 1WY 1101 A 1 
HETATM 4 C C6 1WY . . . B 2 54.194 -0.925 -21.254 1 47.27 ? C6 1WY 1101 A 1 
HETATM 5 C C8 1WY . . . B 2 52.253 0.45 -17.007 1 46.94 ? C8 1WY 1101 A 1 
HETATM 6 C C11 1WY . . . B 2 50.82 2.341 -16.508 1 48.87 ? C11 1WY 1101 A 1 
HETATM 7 C C12 1WY . . . B 2 50.983 0.484 -14.97 1 44.14 ? C12 1WY 1101 A 1 
HETATM 8 O O14 1WY . . . B 2 52.432 -1.375 -15.526 1 49.65 ? O14 1WY 1101 A 1 
HETATM 9 C C15 1WY . . . B 2 51.917 -2.322 -14.597 1 51.97 ? C15 1WY 1101 A 1 
HETATM 10 C C17 1WY . . . B 2 50.625 4.611 -17.677 1 50.7 ? C17 1WY 1101 A 1 
HETATM 11 C C19 1WY . . . B 2 49.852 5.876 -17.722 1 46.22 ? C19 1WY 1101 A 1 
HETATM 12 C C23 1WY . . . B 2 51.832 2.44 -23.157 1 47.05 ? C23 1WY 1101 A 1 
HETATM 13 C C24 1WY . . . B 2 50.453 2.288 -21.435 1 45.2 ? C24 1WY 1101 A 1 
HETATM 14 C C27 1WY . . . B 2 49.76 2.018 -20.262 1 47.18 ? C27 1WY 1101 A 1 
HETATM 15 C C30 1WY . . . B 2 48.048 3.593 -20.951 1 47.13 ? C30 1WY 1101 A 1 
HETATM 16 CL CL1 1WY . . . B 2 53.646 0.06 -23.626 1 51.03 ? CL1 1WY 1101 A 1 
HETATM 17 C C22 1WY . . . B 2 51.654 1.814 -21.931 1 45.33 ? C22 1WY 1101 A 1 
HETATM 18 C C28 1WY . . . B 2 48.552 2.678 -20.021 1 47.44 ? C28 1WY 1101 A 1 
HETATM 19 C C29 1WY . . . B 2 48.757 3.855 -22.125 1 48.65 ? C29 1WY 1101 A 1 
HETATM 20 C C26 1WY . . . B 2 49.953 3.192 -22.342 1 48.6 ? C26 1WY 1101 A 1 
HETATM 21 N N25 1WY . . . B 2 50.795 3.274 -23.378 1 49.22 ? N25 1WY 1101 A 1 
HETATM 22 N N1 1WY . . . B 2 52.417 0.682 -19.927 1 41.92 ? N1 1WY 1101 A 1 
HETATM 23 N N4 1WY . . . B 2 54.07 -1.033 -19.892 1 40.89 ? N4 1WY 1101 A 1 
HETATM 24 N N7 1WY . . . B 2 53.099 -0.322 -17.842 1 46.18 ? N7 1WY 1101 A 1 
HETATM 25 C C10 1WY . . . B 2 51.876 -0.16 -15.815 1 48.53 ? C10 1WY 1101 A 1 
HETATM 26 C C13 1WY . . . B 2 50.459 1.716 -15.319 1 44.38 ? C13 1WY 1101 A 1 
HETATM 27 C C9 1WY . . . B 2 51.723 1.7 -17.358 1 45.22 ? C9 1WY 1101 A 1 
HETATM 28 N N16 1WY . . . B 2 50.246 3.62 -16.772 1 49.16 ? N16 1WY 1101 A 1 
HETATM 29 O O18 1WY . . . B 2 51.554 4.431 -18.435 1 54.16 ? O18 1WY 1101 A 1 
HETATM 30 C C20 1WY . . . B 2 50.737 7.131 -17.687 1 46.03 ? C20 1WY 1101 A 1 
#
_model_server_stats.io_time_ms              55 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           314 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           30 
#