data_4LIV
#
_model_server_result.job_id            Eekvxp6rRtuMq2nZPNj2ew 
_model_server_result.datetime_utc      '2024-11-05 04:40:46' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4liv 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":502}' 
#
_entry.id    4LIV 
#
_exptl.entry_id    4LIV 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              118.088 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'SUCCINIC ACID' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4LIV 
_cell.length_a            75.01 
_cell.length_b            75.01 
_cell.length_c            209 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4LIV 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        96 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 43 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 7_555 y,x,-z 0 1 0 1 0 0 0 0 -1 0 0 0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A NE2 HIS 159 A HIS 159 1_555 B CO CO . A CO 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? 
metalc ? metalc2 A OD2 ASP 161 A ASP 161 1_555 B CO CO . A CO 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
metalc ? metalc3 A NE2 HIS 221 A HIS 221 1_555 B CO CO . A CO 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.137 ? 
metalc ? metalc4 B CO CO . A CO 501 1_555 C O2 SIN . A SIN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.285 ? 
metalc ? metalc5 B CO CO . A CO 501 1_555 C O1 SIN . A SIN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.384 ? 
#
_chem_comp.formula           'C4 H6 O4' 
_chem_comp.formula_weight    118.088 
_chem_comp.id                SIN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'SUCCINIC ACID' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 SIN doub 290 n n 
C1 O2 SIN sing 291 n n 
C1 C2 SIN sing 292 n n 
O2 HO2 SIN sing 293 n n 
C2 C3 SIN sing 294 n n 
C2 H21 SIN sing 295 n n 
C2 H22 SIN sing 296 n n 
C3 C4 SIN sing 297 n n 
C3 H31 SIN sing 298 n n 
C3 H32 SIN sing 299 n n 
C4 O3 SIN doub 300 n n 
C4 O4 SIN sing 301 n n 
O4 HO4 SIN sing 302 n n 
#
_atom_sites.entry_id                     4LIV 
_atom_sites.fract_transf_matrix[1][1]    0.013332 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.013332 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.004785 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 CO A 1 501 1 CO CO . 
C 3 SIN A 1 502 1 SIN SIN . 
D 4 HOH A 1 601 1 HOH HOH . 
D 4 HOH A 2 602 2 HOH HOH . 
D 4 HOH A 3 603 3 HOH HOH . 
D 4 HOH A 4 604 4 HOH HOH . 
D 4 HOH A 5 605 5 HOH HOH . 
D 4 HOH A 6 606 6 HOH HOH . 
D 4 HOH A 7 607 7 HOH HOH . 
D 4 HOH A 8 608 8 HOH HOH . 
D 4 HOH A 9 609 9 HOH HOH . 
D 4 HOH A 10 610 10 HOH HOH . 
D 4 HOH A 11 611 11 HOH HOH . 
D 4 HOH A 12 612 12 HOH HOH . 
D 4 HOH A 13 613 13 HOH HOH . 
D 4 HOH A 14 614 14 HOH HOH . 
D 4 HOH A 15 615 15 HOH HOH . 
D 4 HOH A 16 616 16 HOH HOH . 
D 4 HOH A 17 617 17 HOH HOH . 
D 4 HOH A 18 618 18 HOH HOH . 
D 4 HOH A 19 619 19 HOH HOH . 
D 4 HOH A 20 620 20 HOH HOH . 
D 4 HOH A 21 621 21 HOH HOH . 
D 4 HOH A 22 622 22 HOH HOH . 
D 4 HOH A 23 623 23 HOH HOH . 
D 4 HOH A 24 624 24 HOH HOH . 
D 4 HOH A 25 625 25 HOH HOH . 
D 4 HOH A 26 626 26 HOH HOH . 
D 4 HOH A 27 627 27 HOH HOH . 
D 4 HOH A 28 628 28 HOH HOH . 
D 4 HOH A 29 629 29 HOH HOH . 
D 4 HOH A 30 630 30 HOH HOH . 
D 4 HOH A 31 631 31 HOH HOH . 
D 4 HOH A 32 632 32 HOH HOH . 
D 4 HOH A 33 633 33 HOH HOH . 
D 4 HOH A 34 634 34 HOH HOH . 
D 4 HOH A 35 635 35 HOH HOH . 
D 4 HOH A 36 636 36 HOH HOH . 
D 4 HOH A 37 637 37 HOH HOH . 
D 4 HOH A 38 638 38 HOH HOH . 
D 4 HOH A 39 639 39 HOH HOH . 
D 4 HOH A 40 640 40 HOH HOH . 
D 4 HOH A 41 641 41 HOH HOH . 
D 4 HOH A 42 642 42 HOH HOH . 
D 4 HOH A 43 643 43 HOH HOH . 
D 4 HOH A 44 644 44 HOH HOH . 
D 4 HOH A 45 645 45 HOH HOH . 
D 4 HOH A 46 646 46 HOH HOH . 
D 4 HOH A 47 647 47 HOH HOH . 
D 4 HOH A 48 648 48 HOH HOH . 
D 4 HOH A 49 649 49 HOH HOH . 
D 4 HOH A 50 650 50 HOH HOH . 
D 4 HOH A 51 651 51 HOH HOH . 
D 4 HOH A 52 652 52 HOH HOH . 
D 4 HOH A 53 653 53 HOH HOH . 
D 4 HOH A 54 654 54 HOH HOH . 
D 4 HOH A 55 655 55 HOH HOH . 
D 4 HOH A 56 656 56 HOH HOH . 
D 4 HOH A 57 657 57 HOH HOH . 
D 4 HOH A 58 658 58 HOH HOH . 
D 4 HOH A 59 659 59 HOH HOH . 
D 4 HOH A 60 660 60 HOH HOH . 
D 4 HOH A 61 661 61 HOH HOH . 
D 4 HOH A 62 662 62 HOH HOH . 
D 4 HOH A 63 663 63 HOH HOH . 
D 4 HOH A 64 664 64 HOH HOH . 
D 4 HOH A 65 665 65 HOH HOH . 
D 4 HOH A 66 666 66 HOH HOH . 
D 4 HOH A 67 667 67 HOH HOH . 
D 4 HOH A 68 668 68 HOH HOH . 
D 4 HOH A 69 669 69 HOH HOH . 
D 4 HOH A 70 670 70 HOH HOH . 
D 4 HOH A 71 671 71 HOH HOH . 
D 4 HOH A 72 672 72 HOH HOH . 
D 4 HOH A 73 673 73 HOH HOH . 
D 4 HOH A 74 674 74 HOH HOH . 
D 4 HOH A 75 675 75 HOH HOH . 
D 4 HOH A 76 676 76 HOH HOH . 
D 4 HOH A 77 677 77 HOH HOH . 
D 4 HOH A 78 678 78 HOH HOH . 
D 4 HOH A 79 679 79 HOH HOH . 
D 4 HOH A 80 680 80 HOH HOH . 
D 4 HOH A 81 681 81 HOH HOH . 
D 4 HOH A 82 682 82 HOH HOH . 
D 4 HOH A 83 683 83 HOH HOH . 
D 4 HOH A 84 684 84 HOH HOH . 
D 4 HOH A 85 685 85 HOH HOH . 
D 4 HOH A 86 686 86 HOH HOH . 
D 4 HOH A 87 687 87 HOH HOH . 
D 4 HOH A 88 688 89 HOH HOH . 
D 4 HOH A 89 689 90 HOH HOH . 
D 4 HOH A 90 690 91 HOH HOH . 
D 4 HOH A 91 691 92 HOH HOH . 
D 4 HOH A 92 692 93 HOH HOH . 
D 4 HOH A 93 693 94 HOH HOH . 
D 4 HOH A 94 694 95 HOH HOH . 
D 4 HOH A 95 695 96 HOH HOH . 
D 4 HOH A 96 696 97 HOH HOH . 
D 4 HOH A 97 697 98 HOH HOH . 
D 4 HOH A 98 698 99 HOH HOH . 
D 4 HOH A 99 699 100 HOH HOH . 
D 4 HOH A 100 700 101 HOH HOH . 
D 4 HOH A 101 701 102 HOH HOH . 
D 4 HOH A 102 702 103 HOH HOH . 
D 4 HOH A 103 703 104 HOH HOH . 
D 4 HOH A 104 704 105 HOH HOH . 
D 4 HOH A 105 705 106 HOH HOH . 
D 4 HOH A 106 706 108 HOH HOH . 
D 4 HOH A 107 707 109 HOH HOH . 
D 4 HOH A 108 708 110 HOH HOH . 
D 4 HOH A 109 709 111 HOH HOH . 
D 4 HOH A 110 710 112 HOH HOH . 
D 4 HOH A 111 711 113 HOH HOH . 
D 4 HOH A 112 712 114 HOH HOH . 
D 4 HOH A 113 713 115 HOH HOH . 
D 4 HOH A 114 714 116 HOH HOH . 
D 4 HOH A 115 715 118 HOH HOH . 
D 4 HOH A 116 716 119 HOH HOH . 
D 4 HOH A 117 717 120 HOH HOH . 
D 4 HOH A 118 718 121 HOH HOH . 
D 4 HOH A 119 719 122 HOH HOH . 
D 4 HOH A 120 720 123 HOH HOH . 
D 4 HOH A 121 721 124 HOH HOH . 
D 4 HOH A 122 722 125 HOH HOH . 
D 4 HOH A 123 723 126 HOH HOH . 
D 4 HOH A 124 724 127 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 SIN . . . C 3 -1.308 -10.785 -30.757 1 39.27 ? C1 SIN 502 A 1 
HETATM 2 O O1 SIN . . . C 3 -1.586 -10.637 -29.547 1 39.94 ? O1 SIN 502 A 1 
HETATM 3 O O2 SIN . . . C 3 -0.733 -9.86 -31.367 1 39.76 ? O2 SIN 502 A 1 
HETATM 4 C C2 SIN . . . C 3 -1.649 -12.057 -31.488 1 36.58 ? C2 SIN 502 A 1 
HETATM 5 C C3 SIN . . . C 3 -0.342 -12.716 -31.911 1 30.72 ? C3 SIN 502 A 1 
HETATM 6 C C4 SIN . . . C 3 -0.629 -13.789 -32.93 1 31.97 ? C4 SIN 502 A 1 
HETATM 7 O O3 SIN . . . C 3 -1.638 -13.716 -33.664 1 30.79 ? O3 SIN 502 A 1 
HETATM 8 O O4 SIN . . . C 3 0.137 -14.767 -33.056 1 30.47 ? O4 SIN 502 A 1 
#
_model_server_stats.io_time_ms              14 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           279 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           8 
#