data_4LL3
#
_model_server_result.job_id            3GwAiDvBL7L6m1eAgcl0Ng 
_model_server_result.datetime_utc      '2024-11-28 08:22:45' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4ll3 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":201}' 
#
_entry.id    4LL3 
#
_exptl.entry_id    4LL3 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              547.664 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            (3R,3AS,6AR)-HEXAHYDROFURO[2,3-B]FURAN-3-YL(1S,2R)-3-[[(4-AMINOPHENYL)SULFONYL](ISOBUTYL)AMINO]-1-BENZYL-2-HYDROXYPROPYLCARBAMATE 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            4LL3 
_cell.length_a            62.557 
_cell.length_b            62.557 
_cell.length_c            81.523 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4LL3 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        169 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 61' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
_chem_comp.formula           'C27 H37 N3 O7 S' 
_chem_comp.formula_weight    547.664 
_chem_comp.id                017 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              (3R,3AS,6AR)-HEXAHYDROFURO[2,3-B]FURAN-3-YL(1S,2R)-3-[[(4-AMINOPHENYL)SULFONYL](ISOBUTYL)AMINO]-1-BENZYL-2-HYDROXYPROPYLCARBAMATE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     Darunavir;TMC114;UIC-94017 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N1 C2 017 sing 1 n n 
N1 H11 017 sing 2 n n 
N1 H12 017 sing 3 n n 
C2 C3 017 doub 4 n y 
C2 C7 017 sing 5 n y 
C3 C4 017 sing 6 n y 
C3 H3 017 sing 7 n n 
C4 C5 017 doub 8 n y 
C4 H4 017 sing 9 n n 
C5 C6 017 sing 10 n y 
C5 S8 017 sing 11 n n 
C6 C7 017 doub 12 n y 
C6 H6 017 sing 13 n n 
C7 H7 017 sing 14 n n 
S8 O9 017 doub 15 n n 
S8 O10 017 doub 16 n n 
S8 N11 017 sing 17 n n 
N11 C12 017 sing 18 n n 
N11 C16 017 sing 19 n n 
C12 C13 017 sing 20 n n 
C12 H121 017 sing 21 n n 
C12 H122 017 sing 22 n n 
C13 C14 017 sing 23 n n 
C13 C15 017 sing 24 n n 
C13 H13 017 sing 25 n n 
C14 H141 017 sing 26 n n 
C14 H142 017 sing 27 n n 
C14 H143 017 sing 28 n n 
C15 H151 017 sing 29 n n 
C15 H152 017 sing 30 n n 
C15 H153 017 sing 31 n n 
C16 C17 017 sing 32 n n 
C16 H161 017 sing 33 n n 
C16 H162 017 sing 34 n n 
C17 O18 017 sing 35 n n 
C17 C19 017 sing 36 n n 
C17 H17 017 sing 37 n n 
O18 H18 017 sing 38 n n 
C19 N20 017 sing 39 n n 
C19 C32 017 sing 40 n n 
C19 H19 017 sing 41 n n 
N20 C21 017 sing 42 n n 
N20 H20 017 sing 43 n n 
C21 O22 017 doub 44 n n 
C21 O23 017 sing 45 n n 
O23 C24 017 sing 46 n n 
C24 C25 017 sing 47 n n 
C24 C31 017 sing 48 n n 
C24 H24 017 sing 49 n n 
C25 O26 017 sing 50 n n 
C25 H251 017 sing 51 n n 
C25 H252 017 sing 52 n n 
O26 C27 017 sing 53 n n 
C27 O28 017 sing 54 n n 
C27 C31 017 sing 55 n n 
C27 H27 017 sing 56 n n 
O28 C29 017 sing 57 n n 
C29 C30 017 sing 58 n n 
C29 H291 017 sing 59 n n 
C29 H292 017 sing 60 n n 
C30 C31 017 sing 61 n n 
C30 H301 017 sing 62 n n 
C30 H302 017 sing 63 n n 
C31 H31 017 sing 64 n n 
C32 C38 017 sing 65 n n 
C32 H321 017 sing 66 n n 
C32 H322 017 sing 67 n n 
C33 C34 017 doub 68 n y 
C33 C38 017 sing 69 n y 
C33 H33 017 sing 70 n n 
C34 C35 017 sing 71 n y 
C34 H34 017 sing 72 n n 
C35 C36 017 doub 73 n y 
C35 H35 017 sing 74 n n 
C36 C37 017 sing 75 n y 
C36 H36 017 sing 76 n n 
C37 C38 017 doub 77 n y 
C37 H37 017 sing 78 n n 
#
_atom_sites.entry_id                     4LL3 
_atom_sites.fract_transf_matrix[1][1]    0.015985 
_atom_sites.fract_transf_matrix[1][2]    0.009229 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.018458 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.012266 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 017 A 1 201 201 017 017 . 
D 2 017 A 1 202 201 017 017 . 
E 3 HOH A 1 301 1 HOH HOH . 
E 3 HOH A 2 302 2 HOH HOH . 
E 3 HOH A 3 303 3 HOH HOH . 
E 3 HOH A 4 304 9 HOH HOH . 
E 3 HOH A 5 305 11 HOH HOH . 
E 3 HOH A 6 306 13 HOH HOH . 
E 3 HOH A 7 307 14 HOH HOH . 
E 3 HOH A 8 308 16 HOH HOH . 
E 3 HOH A 9 309 19 HOH HOH . 
E 3 HOH A 10 310 21 HOH HOH . 
E 3 HOH A 11 311 22 HOH HOH . 
E 3 HOH A 12 312 24 HOH HOH . 
E 3 HOH A 13 313 26 HOH HOH . 
E 3 HOH A 14 314 33 HOH HOH . 
E 3 HOH A 15 315 35 HOH HOH . 
E 3 HOH A 16 316 36 HOH HOH . 
E 3 HOH A 17 317 37 HOH HOH . 
E 3 HOH A 18 318 38 HOH HOH . 
E 3 HOH A 19 319 39 HOH HOH . 
E 3 HOH A 20 320 42 HOH HOH . 
E 3 HOH A 21 321 44 HOH HOH . 
E 3 HOH A 22 322 47 HOH HOH . 
E 3 HOH A 23 323 50 HOH HOH . 
E 3 HOH A 24 324 53 HOH HOH . 
E 3 HOH A 25 325 55 HOH HOH . 
E 3 HOH A 26 326 56 HOH HOH . 
E 3 HOH A 27 327 57 HOH HOH . 
E 3 HOH A 28 328 60 HOH HOH . 
E 3 HOH A 29 329 61 HOH HOH . 
E 3 HOH A 30 330 62 HOH HOH . 
E 3 HOH A 31 331 64 HOH HOH . 
E 3 HOH A 32 332 65 HOH HOH . 
E 3 HOH A 33 333 66 HOH HOH . 
E 3 HOH A 34 334 67 HOH HOH . 
E 3 HOH A 35 335 71 HOH HOH . 
E 3 HOH A 36 336 72 HOH HOH . 
E 3 HOH A 37 337 73 HOH HOH . 
E 3 HOH A 38 338 79 HOH HOH . 
E 3 HOH A 39 339 80 HOH HOH . 
E 3 HOH A 40 340 83 HOH HOH . 
E 3 HOH A 41 341 84 HOH HOH . 
E 3 HOH A 42 342 85 HOH HOH . 
E 3 HOH A 43 343 87 HOH HOH . 
E 3 HOH A 44 344 89 HOH HOH . 
E 3 HOH A 45 345 90 HOH HOH . 
E 3 HOH A 46 346 93 HOH HOH . 
E 3 HOH A 47 347 95 HOH HOH . 
E 3 HOH A 48 348 96 HOH HOH . 
E 3 HOH A 49 349 97 HOH HOH . 
E 3 HOH A 50 350 98 HOH HOH . 
E 3 HOH A 51 351 100 HOH HOH . 
E 3 HOH A 52 352 101 HOH HOH . 
E 3 HOH A 53 353 103 HOH HOH . 
E 3 HOH A 54 354 104 HOH HOH . 
E 3 HOH A 55 355 105 HOH HOH . 
E 3 HOH A 56 356 109 HOH HOH . 
E 3 HOH A 57 357 110 HOH HOH . 
E 3 HOH A 58 358 114 HOH HOH . 
E 3 HOH A 59 359 115 HOH HOH . 
E 3 HOH A 60 360 117 HOH HOH . 
E 3 HOH A 61 361 118 HOH HOH . 
E 3 HOH A 62 362 119 HOH HOH . 
E 3 HOH A 63 363 120 HOH HOH . 
E 3 HOH A 64 364 121 HOH HOH . 
E 3 HOH A 65 365 122 HOH HOH . 
E 3 HOH A 66 366 123 HOH HOH . 
E 3 HOH A 67 367 124 HOH HOH . 
E 3 HOH A 68 368 125 HOH HOH . 
E 3 HOH A 69 369 126 HOH HOH . 
E 3 HOH A 70 370 127 HOH HOH . 
E 3 HOH A 71 371 130 HOH HOH . 
E 3 HOH A 72 372 131 HOH HOH . 
E 3 HOH A 73 373 132 HOH HOH . 
E 3 HOH A 74 374 134 HOH HOH . 
E 3 HOH A 75 375 136 HOH HOH . 
E 3 HOH A 76 376 137 HOH HOH . 
E 3 HOH A 77 377 138 HOH HOH . 
F 3 HOH B 1 101 4 HOH HOH . 
F 3 HOH B 2 102 5 HOH HOH . 
F 3 HOH B 3 103 6 HOH HOH . 
F 3 HOH B 4 104 7 HOH HOH . 
F 3 HOH B 5 105 8 HOH HOH . 
F 3 HOH B 6 106 10 HOH HOH . 
F 3 HOH B 7 107 12 HOH HOH . 
F 3 HOH B 8 108 15 HOH HOH . 
F 3 HOH B 9 109 17 HOH HOH . 
F 3 HOH B 10 110 18 HOH HOH . 
F 3 HOH B 11 111 20 HOH HOH . 
F 3 HOH B 12 112 23 HOH HOH . 
F 3 HOH B 13 113 25 HOH HOH . 
F 3 HOH B 14 114 27 HOH HOH . 
F 3 HOH B 15 115 28 HOH HOH . 
F 3 HOH B 16 116 29 HOH HOH . 
F 3 HOH B 17 117 30 HOH HOH . 
F 3 HOH B 18 118 31 HOH HOH . 
F 3 HOH B 19 119 32 HOH HOH . 
F 3 HOH B 20 120 34 HOH HOH . 
F 3 HOH B 21 121 40 HOH HOH . 
F 3 HOH B 22 122 41 HOH HOH . 
F 3 HOH B 23 123 43 HOH HOH . 
F 3 HOH B 24 124 45 HOH HOH . 
F 3 HOH B 25 125 46 HOH HOH . 
F 3 HOH B 26 126 48 HOH HOH . 
F 3 HOH B 27 127 49 HOH HOH . 
F 3 HOH B 28 128 51 HOH HOH . 
F 3 HOH B 29 129 52 HOH HOH . 
F 3 HOH B 30 130 54 HOH HOH . 
F 3 HOH B 31 131 58 HOH HOH . 
F 3 HOH B 32 132 59 HOH HOH . 
F 3 HOH B 33 133 63 HOH HOH . 
F 3 HOH B 34 134 68 HOH HOH . 
F 3 HOH B 35 135 69 HOH HOH . 
F 3 HOH B 36 136 70 HOH HOH . 
F 3 HOH B 37 137 74 HOH HOH . 
F 3 HOH B 38 138 75 HOH HOH . 
F 3 HOH B 39 139 76 HOH HOH . 
F 3 HOH B 40 140 77 HOH HOH . 
F 3 HOH B 41 141 78 HOH HOH . 
F 3 HOH B 42 142 81 HOH HOH . 
F 3 HOH B 43 143 82 HOH HOH . 
F 3 HOH B 44 144 86 HOH HOH . 
F 3 HOH B 45 145 88 HOH HOH . 
F 3 HOH B 46 146 91 HOH HOH . 
F 3 HOH B 47 147 92 HOH HOH . 
F 3 HOH B 48 148 94 HOH HOH . 
F 3 HOH B 49 149 99 HOH HOH . 
F 3 HOH B 50 150 102 HOH HOH . 
F 3 HOH B 51 151 106 HOH HOH . 
F 3 HOH B 52 152 107 HOH HOH . 
F 3 HOH B 53 153 108 HOH HOH . 
F 3 HOH B 54 154 111 HOH HOH . 
F 3 HOH B 55 155 112 HOH HOH . 
F 3 HOH B 56 156 113 HOH HOH . 
F 3 HOH B 57 157 116 HOH HOH . 
F 3 HOH B 58 158 128 HOH HOH . 
F 3 HOH B 59 159 129 HOH HOH . 
F 3 HOH B 60 160 133 HOH HOH . 
F 3 HOH B 61 161 135 HOH HOH . 
F 3 HOH B 62 162 139 HOH HOH . 
F 3 HOH B 63 163 140 HOH HOH . 
F 3 HOH B 64 164 141 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 017 . A . C 2 -8.728 16.19 18.49 0.5 22.33 ? N1 017 201 A 1 
HETATM 2 C C2 017 . A . C 2 -8.659 15.912 19.819 0.5 21.57 ? C2 017 201 A 1 
HETATM 3 C C3 017 . A . C 2 -9.826 15.832 20.583 0.5 21 ? C3 017 201 A 1 
HETATM 4 C C4 017 . A . C 2 -9.747 15.525 21.941 0.5 18.99 ? C4 017 201 A 1 
HETATM 5 C C5 017 . A . C 2 -8.506 15.309 22.546 0.5 19.88 ? C5 017 201 A 1 
HETATM 6 C C6 017 . A . C 2 -7.339 15.371 21.776 0.5 19.57 ? C6 017 201 A 1 
HETATM 7 C C7 017 . A . C 2 -7.418 15.673 20.412 0.5 20.29 ? C7 017 201 A 1 
HETATM 8 S S8 017 . A . C 2 -8.425 14.971 24.116 0.5 21.12 ? S8 017 201 A 1 
HETATM 9 O O9 017 . A . C 2 -9.589 14.227 24.495 0.5 23.21 ? O9 017 201 A 1 
HETATM 10 O O10 017 . A . C 2 -7.273 14.169 24.374 0.5 20.19 ? O10 017 201 A 1 
HETATM 11 N N11 017 . A . C 2 -8.302 16.306 25.058 0.5 21.93 ? N11 017 201 A 1 
HETATM 12 C C12 017 . A . C 2 -7.169 17.194 24.703 0.5 21.44 ? C12 017 201 A 1 
HETATM 13 C C13 017 . A . C 2 -6.59 17.922 25.921 0.5 20.52 ? C13 017 201 A 1 
HETATM 14 C C14 017 . A . C 2 -6.216 16.966 27.053 0.5 20.51 ? C14 017 201 A 1 
HETATM 15 C C15 017 . A . C 2 -5.396 18.801 25.525 0.5 23.11 ? C15 017 201 A 1 
HETATM 16 C C16 017 . A . C 2 -9.555 17.085 25.176 0.5 21.26 ? C16 017 201 A 1 
HETATM 17 C C17 017 . A . C 2 -10.002 17.105 26.646 0.5 20.89 ? C17 017 201 A 1 
HETATM 18 O O18 017 . A . C 2 -11.083 18.03 26.89 0.5 21.8 ? O18 017 201 A 1 
HETATM 19 C C19 017 . A . C 2 -10.4 15.731 27.161 0.5 19.67 ? C19 017 201 A 1 
HETATM 20 N N20 017 . A . C 2 -10.498 15.921 28.604 0.5 19.25 ? N20 017 201 A 1 
HETATM 21 C C21 017 . A . C 2 -9.714 15.26 29.447 0.5 19.43 ? C21 017 201 A 1 
HETATM 22 O O22 017 . A . C 2 -8.844 14.445 29.115 0.5 17.51 ? O22 017 201 A 1 
HETATM 23 O O23 017 . A . C 2 -9.94 15.581 30.845 0.5 18.06 ? O23 017 201 A 1 
HETATM 24 C C24 017 . A . C 2 -9.345 14.725 31.795 0.5 19.32 ? C24 017 201 A 1 
HETATM 25 C C25 017 . A . C 2 -9.09 15.63 32.984 0.5 20.71 ? C25 017 201 A 1 
HETATM 26 O O26 017 . A . C 2 -10.319 15.634 33.711 0.5 19.49 ? O26 017 201 A 1 
HETATM 27 C C27 017 . A . C 2 -11.107 14.478 33.392 0.5 19.63 ? C27 017 201 A 1 
HETATM 28 O O28 017 . A . C 2 -12.368 14.856 32.84 0.5 20.67 ? O28 017 201 A 1 
HETATM 29 C C29 017 . A . C 2 -12.723 13.99 31.755 0.5 20.08 ? C29 017 201 A 1 
HETATM 30 C C30 017 . A . C 2 -11.44 13.33 31.291 0.5 18.8 ? C30 017 201 A 1 
HETATM 31 C C31 017 . A . C 2 -10.379 13.739 32.3 0.5 20.4 ? C31 017 201 A 1 
HETATM 32 C C32 017 . A . C 2 -11.792 15.287 26.704 0.5 19.54 ? C32 017 201 A 1 
HETATM 33 C C33 017 . A . C 2 -13.28 13.875 28.147 0.5 24.15 ? C33 017 201 A 1 
HETATM 34 C C34 017 . A . C 2 -13.649 12.653 28.706 0.5 23.33 ? C34 017 201 A 1 
HETATM 35 C C35 017 . A . C 2 -12.891 11.516 28.423 0.5 23.17 ? C35 017 201 A 1 
HETATM 36 C C36 017 . A . C 2 -11.782 11.602 27.581 0.5 23.43 ? C36 017 201 A 1 
HETATM 37 C C37 017 . A . C 2 -11.409 12.819 27.017 0.5 22.04 ? C37 017 201 A 1 
HETATM 38 C C38 017 . A . C 2 -12.16 13.957 27.306 0.5 21.35 ? C38 017 201 A 1 
#
_model_server_stats.io_time_ms              100 
_model_server_stats.parse_time_ms           38 
_model_server_stats.create_model_time_ms    12 
_model_server_stats.query_time_ms           361 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           38 
#