data_4LLH
#
_model_server_result.job_id            MqrSJzzBwHz0RXvQIdxoMQ 
_model_server_result.datetime_utc      '2024-11-24 11:58:45' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4llh 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"I","auth_seq_id":602}' 
#
_entry.id    4LLH 
#
_exptl.entry_id    4LLH 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              494.573 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            5-CYCLOHEXYL-1-PENTYL-BETA-D-MALTOSIDE 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4LLH 
_cell.length_a            115.47 
_cell.length_b            129.69 
_cell.length_c            164.65 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4LLH 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    trimeric 
_pdbx_struct_assembly.oligomeric_count      3 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 5 I N N 
? 5 K N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A O ALA 118 A ALA 147 1_555 E NA NA . A NA 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.768 ? 
metalc ? metalc2 A O MET 121 A MET 150 1_555 E NA NA . A NA 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.08 ? 
metalc ? metalc3 A O PHE 435 A PHE 464 1_555 E NA NA . A NA 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.799 ? 
metalc ? metalc4 A OG1 THR 438 A THR 467 1_555 E NA NA . A NA 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.134 ? 
metalc ? metalc5 A OG SER 439 A SER 468 1_555 E NA NA . A NA 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.27 ? 
metalc ? metalc6 B O ALA 118 B ALA 147 1_555 G NA NA . B NA 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.418 ? 
metalc ? metalc7 B O MET 121 B MET 150 1_555 G NA NA . B NA 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.877 ? 
metalc ? metalc8 B O PHE 435 B PHE 464 1_555 G NA NA . B NA 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.826 ? 
metalc ? metalc9 B OG1 THR 438 B THR 467 1_555 G NA NA . B NA 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.501 ? 
metalc ? metalc10 B OG SER 439 B SER 468 1_555 G NA NA . B NA 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.353 ? 
#
_chem_comp.formula           'C23 H42 O11' 
_chem_comp.formula_weight    494.573 
_chem_comp.id                CM5 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              5-CYCLOHEXYL-1-PENTYL-BETA-D-MALTOSIDE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     '5-CYCLOHEXYLPENTYL 4-O-ALPHA-D-GLUCOPYRANOSYL-BETA-D-GLUCOPYRANOSIDE;CYMAL-5' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C7 C8 CM5 sing 90 n n 
C7 C6 CM5 sing 91 n n 
C7 H71 CM5 sing 92 n n 
C7 H72 CM5 sing 93 n n 
C8 C9 CM5 sing 94 n n 
C8 H81 CM5 sing 95 n n 
C8 H82 CM5 sing 96 n n 
C9 C10 CM5 sing 97 n n 
C9 H91 CM5 sing 98 n n 
C9 H92 CM5 sing 99 n n 
C10 C11 CM5 sing 100 n n 
C10 H101 CM5 sing 101 n n 
C10 H102 CM5 sing 102 n n 
C11 C6 CM5 sing 103 n n 
C11 H111 CM5 sing 104 n n 
C11 H112 CM5 sing 105 n n 
C6 C5 CM5 sing 106 n n 
C6 H6 CM5 sing 107 n n 
C5 C4 CM5 sing 108 n n 
C5 H51 CM5 sing 109 n n 
C5 H52 CM5 sing 110 n n 
C4 C3 CM5 sing 111 n n 
C4 H41 CM5 sing 112 n n 
C4 H42 CM5 sing 113 n n 
C3 C2 CM5 sing 114 n n 
C3 H31A CM5 sing 115 n n 
C3 H32A CM5 sing 116 n n 
C2 C1 CM5 sing 117 n n 
C2 H21A CM5 sing 118 n n 
C2 H22A CM5 sing 119 n n 
C1 O12 CM5 sing 120 n n 
C1 H11 CM5 sing 121 n n 
C1 H12 CM5 sing 122 n n 
O12 C13 CM5 sing 123 n n 
C13 C18 CM5 sing 124 n n 
C13 O14 CM5 sing 125 n n 
C13 H13 CM5 sing 126 n n 
C18 O22 CM5 sing 127 n n 
C18 C17 CM5 sing 128 n n 
C18 H18 CM5 sing 129 n n 
O22 H22 CM5 sing 130 n n 
C17 O21 CM5 sing 131 n n 
C17 C16 CM5 sing 132 n n 
C17 H17 CM5 sing 133 n n 
O21 H21 CM5 sing 134 n n 
O14 C15 CM5 sing 135 n n 
C15 C19 CM5 sing 136 n n 
C15 C16 CM5 sing 137 n n 
C15 H15 CM5 sing 138 n n 
C19 O20 CM5 sing 139 n n 
C19 H191 CM5 sing 140 n n 
C19 H192 CM5 sing 141 n n 
O20 H20 CM5 sing 142 n n 
C16 O23 CM5 sing 143 n n 
C16 H16 CM5 sing 144 n n 
O23 C24 CM5 sing 145 n n 
C24 O25 CM5 sing 146 n n 
C24 C29 CM5 sing 147 n n 
C24 H24 CM5 sing 148 n n 
O25 C26 CM5 sing 149 n n 
C26 C30 CM5 sing 150 n n 
C26 C27 CM5 sing 151 n n 
C26 H26 CM5 sing 152 n n 
C30 O31 CM5 sing 153 n n 
C30 H301 CM5 sing 154 n n 
C30 H302 CM5 sing 155 n n 
O31 H31 CM5 sing 156 n n 
C27 O32 CM5 sing 157 n n 
C27 C28 CM5 sing 158 n n 
C27 H27 CM5 sing 159 n n 
O32 H32 CM5 sing 160 n n 
C28 O33 CM5 sing 161 n n 
C28 C29 CM5 sing 162 n n 
C28 H28 CM5 sing 163 n n 
O33 H33 CM5 sing 164 n n 
C29 O34 CM5 sing 165 n n 
C29 H29 CM5 sing 166 n n 
O34 H34 CM5 sing 167 n n 
#
_atom_sites.entry_id                     4LLH 
_atom_sites.fract_transf_matrix[1][1]    0.00866 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.007711 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006073 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 2 1Y8 A 1 601 2486 1Y8 CHT . 
E 3 NA A 1 602 1 NA NA . 
F 2 1Y8 B 1 601 2486 1Y8 CHT . 
G 3 NA B 1 602 1 NA NA . 
H 4 CL C 1 601 1 CL CL . 
I 5 CM5 C 1 602 1 CM5 CM5 . 
J 2 1Y8 C 1 603 2486 1Y8 CHT . 
K 5 CM5 C 1 604 1 CM5 CM5 . 
L 6 HOH A 1 701 1 HOH HOH . 
L 6 HOH A 2 702 2 HOH HOH . 
L 6 HOH A 3 703 4 HOH HOH . 
L 6 HOH A 4 704 5 HOH HOH . 
L 6 HOH A 5 705 7 HOH HOH . 
L 6 HOH A 6 706 8 HOH HOH . 
L 6 HOH A 7 707 9 HOH HOH . 
L 6 HOH A 8 708 10 HOH HOH . 
L 6 HOH A 9 709 11 HOH HOH . 
L 6 HOH A 10 710 12 HOH HOH . 
L 6 HOH A 11 711 13 HOH HOH . 
L 6 HOH A 12 712 14 HOH HOH . 
L 6 HOH A 13 713 15 HOH HOH . 
L 6 HOH A 14 714 18 HOH HOH . 
L 6 HOH A 15 715 19 HOH HOH . 
L 6 HOH A 16 716 20 HOH HOH . 
L 6 HOH A 17 717 21 HOH HOH . 
L 6 HOH A 18 718 22 HOH HOH . 
L 6 HOH A 19 719 23 HOH HOH . 
L 6 HOH A 20 720 60 HOH HOH . 
L 6 HOH A 21 721 68 HOH HOH . 
L 6 HOH A 22 722 69 HOH HOH . 
L 6 HOH A 23 723 70 HOH HOH . 
L 6 HOH A 24 724 71 HOH HOH . 
L 6 HOH A 25 725 90 HOH HOH . 
M 6 HOH B 1 701 24 HOH HOH . 
M 6 HOH B 2 702 25 HOH HOH . 
M 6 HOH B 3 703 26 HOH HOH . 
M 6 HOH B 4 704 27 HOH HOH . 
M 6 HOH B 5 705 28 HOH HOH . 
M 6 HOH B 6 706 29 HOH HOH . 
M 6 HOH B 7 707 30 HOH HOH . 
M 6 HOH B 8 708 31 HOH HOH . 
M 6 HOH B 9 709 32 HOH HOH . 
M 6 HOH B 10 710 33 HOH HOH . 
M 6 HOH B 11 711 34 HOH HOH . 
M 6 HOH B 12 712 35 HOH HOH . 
M 6 HOH B 13 713 39 HOH HOH . 
M 6 HOH B 14 714 40 HOH HOH . 
M 6 HOH B 15 715 41 HOH HOH . 
M 6 HOH B 16 716 42 HOH HOH . 
M 6 HOH B 17 717 43 HOH HOH . 
M 6 HOH B 18 718 67 HOH HOH . 
M 6 HOH B 19 719 72 HOH HOH . 
M 6 HOH B 20 720 73 HOH HOH . 
M 6 HOH B 21 721 74 HOH HOH . 
M 6 HOH B 22 722 75 HOH HOH . 
M 6 HOH B 23 723 76 HOH HOH . 
M 6 HOH B 24 724 77 HOH HOH . 
M 6 HOH B 25 725 91 HOH HOH . 
M 6 HOH B 26 726 92 HOH HOH . 
N 6 HOH C 1 701 3 HOH HOH . 
N 6 HOH C 2 702 16 HOH HOH . 
N 6 HOH C 3 703 17 HOH HOH . 
N 6 HOH C 4 704 36 HOH HOH . 
N 6 HOH C 5 705 37 HOH HOH . 
N 6 HOH C 6 706 38 HOH HOH . 
N 6 HOH C 7 707 44 HOH HOH . 
N 6 HOH C 8 708 45 HOH HOH . 
N 6 HOH C 9 709 46 HOH HOH . 
N 6 HOH C 10 710 47 HOH HOH . 
N 6 HOH C 11 711 48 HOH HOH . 
N 6 HOH C 12 712 49 HOH HOH . 
N 6 HOH C 13 713 50 HOH HOH . 
N 6 HOH C 14 714 51 HOH HOH . 
N 6 HOH C 15 715 52 HOH HOH . 
N 6 HOH C 16 716 53 HOH HOH . 
N 6 HOH C 17 717 54 HOH HOH . 
N 6 HOH C 18 718 55 HOH HOH . 
N 6 HOH C 19 719 56 HOH HOH . 
N 6 HOH C 20 720 57 HOH HOH . 
N 6 HOH C 21 721 58 HOH HOH . 
N 6 HOH C 22 722 59 HOH HOH . 
N 6 HOH C 23 723 61 HOH HOH . 
N 6 HOH C 24 724 62 HOH HOH . 
N 6 HOH C 25 725 63 HOH HOH . 
N 6 HOH C 26 726 64 HOH HOH . 
N 6 HOH C 27 727 65 HOH HOH . 
N 6 HOH C 28 728 66 HOH HOH . 
N 6 HOH C 29 729 78 HOH HOH . 
N 6 HOH C 30 730 79 HOH HOH . 
N 6 HOH C 31 731 80 HOH HOH . 
N 6 HOH C 32 732 81 HOH HOH . 
N 6 HOH C 33 733 82 HOH HOH . 
N 6 HOH C 34 734 83 HOH HOH . 
N 6 HOH C 35 735 84 HOH HOH . 
N 6 HOH C 36 736 85 HOH HOH . 
N 6 HOH C 37 737 86 HOH HOH . 
N 6 HOH C 38 738 87 HOH HOH . 
N 6 HOH C 39 739 88 HOH HOH . 
N 6 HOH C 40 740 89 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C7 CM5 . . . I 5 -3.575 -0.111 30.4 1 46.12 ? C7 CM5 602 C 1 
HETATM 2 C C8 CM5 . . . I 5 -4.894 0.586 30.393 1 42.53 ? C8 CM5 602 C 1 
HETATM 3 C C9 CM5 . . . I 5 -4.941 1.699 29.395 1 42.92 ? C9 CM5 602 C 1 
HETATM 4 C C10 CM5 . . . I 5 -3.827 2.677 29.58 1 46.26 ? C10 CM5 602 C 1 
HETATM 5 C C11 CM5 . . . I 5 -2.859 2.259 30.641 1 48.88 ? C11 CM5 602 C 1 
HETATM 6 C C6 CM5 . . . I 5 -2.42 0.837 30.5 1 48.56 ? C6 CM5 602 C 1 
HETATM 7 C C5 CM5 . . . I 5 -1.508 0.441 31.676 1 47.48 ? C5 CM5 602 C 1 
HETATM 8 C C4 CM5 . . . I 5 -0.162 -0.26 31.324 1 65.78 ? C4 CM5 602 C 1 
HETATM 9 C C3 CM5 . . . I 5 0.81 -0.56 32.469 1 66.81 ? C3 CM5 602 C 1 
HETATM 10 C C2 CM5 . . . I 5 0.601 -1.848 33.25 1 67.66 ? C2 CM5 602 C 1 
HETATM 11 C C1 CM5 . . . I 5 1.124 -1.905 34.649 1 69.21 ? C1 CM5 602 C 1 
HETATM 12 O O12 CM5 . . . I 5 2.372 -2.541 34.88 1 71.41 ? O12 CM5 602 C 1 
HETATM 13 C C13 CM5 . . . I 5 2.555 -3.894 34.612 1 71.76 ? C13 CM5 602 C 1 
HETATM 14 C C18 CM5 . . . I 5 3.277 -4.545 35.776 1 70.76 ? C18 CM5 602 C 1 
HETATM 15 O O22 CM5 . . . I 5 3.153 -3.717 36.933 1 71.03 ? O22 CM5 602 C 1 
HETATM 16 C C17 CM5 . . . I 5 2.865 -5.865 36.071 1 68.67 ? C17 CM5 602 C 1 
HETATM 17 O O21 CM5 . . . I 5 3.48 -6.305 37.355 1 69.19 ? O21 CM5 602 C 1 
HETATM 18 O O14 CM5 . . . I 5 1.346 -4.52 34.263 1 68.47 ? O14 CM5 602 C 1 
HETATM 19 C C15 CM5 . . . I 5 0.637 -5.127 35.316 1 61.17 ? C15 CM5 602 C 1 
HETATM 20 C C19 CM5 . . . I 5 -0.584 -5.806 34.781 1 50.48 ? C19 CM5 602 C 1 
HETATM 21 O O20 CM5 . . . I 5 -1.811 -5.416 35.336 1 44.73 ? O20 CM5 602 C 1 
HETATM 22 C C16 CM5 . . . I 5 1.468 -6.074 36.152 1 66.32 ? C16 CM5 602 C 1 
HETATM 23 O O23 CM5 . . . I 5 1.129 -7.471 35.829 1 70.8 ? O23 CM5 602 C 1 
HETATM 24 C C24 CM5 . . . I 5 1.963 -8.079 34.854 1 70.25 ? C24 CM5 602 C 1 
HETATM 25 O O25 CM5 . . . I 5 1.16 -8.813 33.966 1 68.05 ? O25 CM5 602 C 1 
HETATM 26 C C26 CM5 . . . I 5 1.16 -10.281 34.225 1 70.16 ? C26 CM5 602 C 1 
HETATM 27 C C30 CM5 . . . I 5 -0.093 -10.887 33.689 1 71.01 ? C30 CM5 602 C 1 
HETATM 28 O O31 CM5 . . . I 5 -0.819 -11.736 34.517 1 71.51 ? O31 CM5 602 C 1 
HETATM 29 C C27 CM5 . . . I 5 1.305 -10.613 35.661 1 69.05 ? C27 CM5 602 C 1 
HETATM 30 O O32 CM5 . . . I 5 1.297 -12.045 35.837 1 70.46 ? O32 CM5 602 C 1 
HETATM 31 C C28 CM5 . . . I 5 2.491 -10.073 36.247 1 66.46 ? C28 CM5 602 C 1 
HETATM 32 O O33 CM5 . . . I 5 3.514 -11.099 36.343 1 63.07 ? O33 CM5 602 C 1 
HETATM 33 C C29 CM5 . . . I 5 3.031 -8.916 35.515 1 68.12 ? C29 CM5 602 C 1 
HETATM 34 O O34 CM5 . . . I 5 4.013 -9.325 34.577 1 62.33 ? O34 CM5 602 C 1 
#
_model_server_stats.io_time_ms              27 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    29 
_model_server_stats.query_time_ms           387 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           34 
#