data_4LMB
#
_model_server_result.job_id            9-Cx11lkVvKfj77b-idxXA 
_model_server_result.datetime_utc      '2024-11-05 01:19:05' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4lmb 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":402}' 
#
_entry.id    4LMB 
#
_exptl.entry_id    4LMB 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              121.158 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            CYSTEINE 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            4LMB 
_cell.length_a            99.846 
_cell.length_b            99.846 
_cell.length_c            164.141 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4LMB 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        179 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 65 2 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 12_544 x,x-y-1,-z-1/6 0.5 0.866025 0 0.866025 -0.5 0 0 0 -1 49.923 -86.469172 -27.356833 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 B N N 
? 2 C N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 B SG CYS . A CYS 401 1_555 C SG CYS . A CYS 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.019 ? 
covale ? covale1 A NZ LYS 53 A LYS 46 1_555 D C4A PLP . A PLP 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.449 ? 
#
_chem_comp.formula           'C3 H7 N O2 S' 
_chem_comp.formula_weight    121.158 
_chem_comp.id                CYS 
_chem_comp.mon_nstd_flag     y 
_chem_comp.name              CYSTEINE 
_chem_comp.type              'l-peptide linking' 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N CA CYS sing 70 n n 
N H CYS sing 71 n n 
N H2 CYS sing 72 n n 
CA C CYS sing 73 n n 
CA CB CYS sing 74 n n 
CA HA CYS sing 75 n n 
C O CYS doub 76 n n 
C OXT CYS sing 77 n n 
CB SG CYS sing 78 n n 
CB HB2 CYS sing 79 n n 
CB HB3 CYS sing 80 n n 
SG HG CYS sing 81 n n 
OXT HXT CYS sing 82 n n 
#
_atom_sites.entry_id                     4LMB 
_atom_sites.fract_transf_matrix[1][1]    0.010015 
_atom_sites.fract_transf_matrix[1][2]    0.005782 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011565 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006092 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 CYS A 1 401 400 CYS DRG . 
C 2 CYS A 1 402 400 CYS DRG . 
D 3 PLP A 1 403 330 PLP PLP . 
E 4 HOH A 1 501 2 HOH HOH . 
E 4 HOH A 2 502 3 HOH HOH . 
E 4 HOH A 3 503 4 HOH HOH . 
E 4 HOH A 4 504 5 HOH HOH . 
E 4 HOH A 5 505 6 HOH HOH . 
E 4 HOH A 6 506 7 HOH HOH . 
E 4 HOH A 7 507 8 HOH HOH . 
E 4 HOH A 8 508 9 HOH HOH . 
E 4 HOH A 9 509 10 HOH HOH . 
E 4 HOH A 10 510 11 HOH HOH . 
E 4 HOH A 11 511 12 HOH HOH . 
E 4 HOH A 12 512 13 HOH HOH . 
E 4 HOH A 13 513 14 HOH HOH . 
E 4 HOH A 14 514 15 HOH HOH . 
E 4 HOH A 15 515 16 HOH HOH . 
E 4 HOH A 16 516 17 HOH HOH . 
E 4 HOH A 17 517 18 HOH HOH . 
E 4 HOH A 18 518 19 HOH HOH . 
E 4 HOH A 19 519 20 HOH HOH . 
E 4 HOH A 20 520 21 HOH HOH . 
E 4 HOH A 21 521 22 HOH HOH . 
E 4 HOH A 22 522 23 HOH HOH . 
E 4 HOH A 23 523 24 HOH HOH . 
E 4 HOH A 24 524 25 HOH HOH . 
E 4 HOH A 25 525 26 HOH HOH . 
E 4 HOH A 26 526 27 HOH HOH . 
E 4 HOH A 27 527 28 HOH HOH . 
E 4 HOH A 28 528 29 HOH HOH . 
E 4 HOH A 29 529 30 HOH HOH . 
E 4 HOH A 30 530 31 HOH HOH . 
E 4 HOH A 31 531 32 HOH HOH . 
E 4 HOH A 32 532 33 HOH HOH . 
E 4 HOH A 33 533 34 HOH HOH . 
E 4 HOH A 34 534 35 HOH HOH . 
E 4 HOH A 35 535 36 HOH HOH . 
E 4 HOH A 36 536 37 HOH HOH . 
E 4 HOH A 37 537 38 HOH HOH . 
E 4 HOH A 38 538 39 HOH HOH . 
E 4 HOH A 39 539 40 HOH HOH . 
E 4 HOH A 40 540 41 HOH HOH . 
E 4 HOH A 41 541 42 HOH HOH . 
E 4 HOH A 42 542 43 HOH HOH . 
E 4 HOH A 43 543 44 HOH HOH . 
E 4 HOH A 44 544 45 HOH HOH . 
E 4 HOH A 45 545 46 HOH HOH . 
E 4 HOH A 46 546 47 HOH HOH . 
E 4 HOH A 47 547 48 HOH HOH . 
E 4 HOH A 48 548 49 HOH HOH . 
E 4 HOH A 49 549 50 HOH HOH . 
E 4 HOH A 50 550 51 HOH HOH . 
E 4 HOH A 51 551 52 HOH HOH . 
E 4 HOH A 52 552 53 HOH HOH . 
E 4 HOH A 53 553 54 HOH HOH . 
E 4 HOH A 54 554 55 HOH HOH . 
E 4 HOH A 55 555 56 HOH HOH . 
E 4 HOH A 56 556 57 HOH HOH . 
E 4 HOH A 57 557 58 HOH HOH . 
E 4 HOH A 58 558 59 HOH HOH . 
E 4 HOH A 59 559 60 HOH HOH . 
E 4 HOH A 60 560 61 HOH HOH . 
E 4 HOH A 61 561 62 HOH HOH . 
E 4 HOH A 62 562 63 HOH HOH . 
E 4 HOH A 63 563 64 HOH HOH . 
E 4 HOH A 64 564 65 HOH HOH . 
E 4 HOH A 65 565 66 HOH HOH . 
E 4 HOH A 66 566 67 HOH HOH . 
E 4 HOH A 67 567 68 HOH HOH . 
E 4 HOH A 68 568 69 HOH HOH . 
E 4 HOH A 69 569 70 HOH HOH . 
E 4 HOH A 70 570 71 HOH HOH . 
E 4 HOH A 71 571 72 HOH HOH . 
E 4 HOH A 72 572 73 HOH HOH . 
E 4 HOH A 73 573 74 HOH HOH . 
E 4 HOH A 74 574 75 HOH HOH . 
E 4 HOH A 75 575 76 HOH HOH . 
E 4 HOH A 76 576 77 HOH HOH . 
E 4 HOH A 77 577 78 HOH HOH . 
E 4 HOH A 78 578 79 HOH HOH . 
E 4 HOH A 79 579 80 HOH HOH . 
E 4 HOH A 80 580 81 HOH HOH . 
E 4 HOH A 81 581 82 HOH HOH . 
E 4 HOH A 82 582 83 HOH HOH . 
E 4 HOH A 83 583 84 HOH HOH . 
E 4 HOH A 84 584 85 HOH HOH . 
E 4 HOH A 85 585 86 HOH HOH . 
E 4 HOH A 86 586 87 HOH HOH . 
E 4 HOH A 87 587 88 HOH HOH . 
E 4 HOH A 88 588 89 HOH HOH . 
E 4 HOH A 89 589 90 HOH HOH . 
E 4 HOH A 90 590 91 HOH HOH . 
E 4 HOH A 91 591 92 HOH HOH . 
E 4 HOH A 92 592 93 HOH HOH . 
E 4 HOH A 93 593 94 HOH HOH . 
E 4 HOH A 94 594 95 HOH HOH . 
E 4 HOH A 95 595 96 HOH HOH . 
E 4 HOH A 96 596 97 HOH HOH . 
E 4 HOH A 97 597 98 HOH HOH . 
E 4 HOH A 98 598 99 HOH HOH . 
E 4 HOH A 99 599 100 HOH HOH . 
E 4 HOH A 100 600 101 HOH HOH . 
E 4 HOH A 101 601 1 HOH HOH . 
E 4 HOH A 102 602 102 HOH HOH . 
E 4 HOH A 103 603 103 HOH HOH . 
E 4 HOH A 104 604 104 HOH HOH . 
E 4 HOH A 105 605 105 HOH HOH . 
E 4 HOH A 106 606 106 HOH HOH . 
E 4 HOH A 107 607 107 HOH HOH . 
E 4 HOH A 108 608 108 HOH HOH . 
E 4 HOH A 109 609 109 HOH HOH . 
E 4 HOH A 110 610 110 HOH HOH . 
E 4 HOH A 111 611 111 HOH HOH . 
E 4 HOH A 112 612 112 HOH HOH . 
E 4 HOH A 113 613 113 HOH HOH . 
E 4 HOH A 114 614 114 HOH HOH . 
E 4 HOH A 115 615 115 HOH HOH . 
E 4 HOH A 116 616 116 HOH HOH . 
E 4 HOH A 117 617 117 HOH HOH . 
E 4 HOH A 118 618 118 HOH HOH . 
E 4 HOH A 119 619 119 HOH HOH . 
E 4 HOH A 120 620 120 HOH HOH . 
E 4 HOH A 121 621 121 HOH HOH . 
E 4 HOH A 122 622 122 HOH HOH . 
E 4 HOH A 123 623 123 HOH HOH . 
E 4 HOH A 124 624 124 HOH HOH . 
E 4 HOH A 125 625 125 HOH HOH . 
E 4 HOH A 126 626 126 HOH HOH . 
E 4 HOH A 127 627 127 HOH HOH . 
E 4 HOH A 128 628 128 HOH HOH . 
E 4 HOH A 129 629 129 HOH HOH . 
E 4 HOH A 130 630 130 HOH HOH . 
E 4 HOH A 131 631 131 HOH HOH . 
E 4 HOH A 132 632 132 HOH HOH . 
E 4 HOH A 133 633 133 HOH HOH . 
E 4 HOH A 134 634 134 HOH HOH . 
E 4 HOH A 135 635 135 HOH HOH . 
E 4 HOH A 136 636 136 HOH HOH . 
E 4 HOH A 137 637 137 HOH HOH . 
E 4 HOH A 138 638 138 HOH HOH . 
E 4 HOH A 139 639 139 HOH HOH . 
E 4 HOH A 140 640 140 HOH HOH . 
E 4 HOH A 141 641 141 HOH HOH . 
E 4 HOH A 142 642 142 HOH HOH . 
E 4 HOH A 143 643 143 HOH HOH . 
E 4 HOH A 144 644 144 HOH HOH . 
E 4 HOH A 145 645 145 HOH HOH . 
E 4 HOH A 146 646 146 HOH HOH . 
E 4 HOH A 147 647 147 HOH HOH . 
E 4 HOH A 148 648 148 HOH HOH . 
E 4 HOH A 149 649 149 HOH HOH . 
E 4 HOH A 150 650 150 HOH HOH . 
E 4 HOH A 151 651 151 HOH HOH . 
E 4 HOH A 152 652 152 HOH HOH . 
E 4 HOH A 153 653 153 HOH HOH . 
E 4 HOH A 154 654 154 HOH HOH . 
E 4 HOH A 155 655 155 HOH HOH . 
E 4 HOH A 156 656 156 HOH HOH . 
E 4 HOH A 157 657 157 HOH HOH . 
E 4 HOH A 158 658 158 HOH HOH . 
E 4 HOH A 159 659 159 HOH HOH . 
E 4 HOH A 160 660 160 HOH HOH . 
E 4 HOH A 161 661 161 HOH HOH . 
E 4 HOH A 162 662 162 HOH HOH . 
E 4 HOH A 163 663 163 HOH HOH . 
E 4 HOH A 164 664 164 HOH HOH . 
E 4 HOH A 165 665 165 HOH HOH . 
E 4 HOH A 166 666 166 HOH HOH . 
E 4 HOH A 167 667 167 HOH HOH . 
E 4 HOH A 168 668 168 HOH HOH . 
E 4 HOH A 169 669 169 HOH HOH . 
E 4 HOH A 170 670 170 HOH HOH . 
E 4 HOH A 171 671 171 HOH HOH . 
E 4 HOH A 172 672 172 HOH HOH . 
E 4 HOH A 173 673 173 HOH HOH . 
E 4 HOH A 174 674 174 HOH HOH . 
E 4 HOH A 175 675 175 HOH HOH . 
E 4 HOH A 176 676 176 HOH HOH . 
E 4 HOH A 177 677 177 HOH HOH . 
E 4 HOH A 178 678 178 HOH HOH . 
E 4 HOH A 179 679 179 HOH HOH . 
E 4 HOH A 180 680 180 HOH HOH . 
E 4 HOH A 181 681 181 HOH HOH . 
E 4 HOH A 182 682 182 HOH HOH . 
E 4 HOH A 183 683 183 HOH HOH . 
E 4 HOH A 184 684 184 HOH HOH . 
E 4 HOH A 185 685 185 HOH HOH . 
E 4 HOH A 186 686 186 HOH HOH . 
E 4 HOH A 187 687 187 HOH HOH . 
E 4 HOH A 188 688 188 HOH HOH . 
E 4 HOH A 189 689 189 HOH HOH . 
E 4 HOH A 190 690 190 HOH HOH . 
E 4 HOH A 191 691 191 HOH HOH . 
E 4 HOH A 192 692 192 HOH HOH . 
E 4 HOH A 193 693 193 HOH HOH . 
E 4 HOH A 194 694 194 HOH HOH . 
E 4 HOH A 195 695 195 HOH HOH . 
E 4 HOH A 196 696 196 HOH HOH . 
E 4 HOH A 197 697 197 HOH HOH . 
E 4 HOH A 198 698 198 HOH HOH . 
E 4 HOH A 199 699 199 HOH HOH . 
E 4 HOH A 200 700 200 HOH HOH . 
E 4 HOH A 201 701 201 HOH HOH . 
E 4 HOH A 202 702 202 HOH HOH . 
E 4 HOH A 203 703 203 HOH HOH . 
E 4 HOH A 204 704 204 HOH HOH . 
E 4 HOH A 205 705 205 HOH HOH . 
E 4 HOH A 206 706 206 HOH HOH . 
E 4 HOH A 207 707 207 HOH HOH . 
E 4 HOH A 208 708 208 HOH HOH . 
E 4 HOH A 209 709 209 HOH HOH . 
E 4 HOH A 210 710 210 HOH HOH . 
E 4 HOH A 211 711 211 HOH HOH . 
E 4 HOH A 212 712 212 HOH HOH . 
E 4 HOH A 213 713 213 HOH HOH . 
E 4 HOH A 214 714 214 HOH HOH . 
E 4 HOH A 215 715 215 HOH HOH . 
E 4 HOH A 216 716 216 HOH HOH . 
E 4 HOH A 217 717 217 HOH HOH . 
E 4 HOH A 218 718 218 HOH HOH . 
E 4 HOH A 219 719 219 HOH HOH . 
E 4 HOH A 220 720 220 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N CYS . . . C 2 38.996 -13.695 -10.165 0.9 43.28 ? N CYS 402 A 1 
HETATM 2 C CA CYS . . . C 2 37.934 -14.46 -9.613 0.9 47.08 ? CA CYS 402 A 1 
HETATM 3 C C CYS . . . C 2 36.926 -15.017 -10.587 0.9 47.99 ? C CYS 402 A 1 
HETATM 4 O O CYS . . . C 2 35.721 -15.063 -10.27 0.9 59.14 ? O CYS 402 A 1 
HETATM 5 C CB CYS . . . C 2 37.41 -13.412 -8.698 0.9 48.29 ? CB CYS 402 A 1 
HETATM 6 S SG CYS . . . C 2 38.862 -12.775 -7.866 0.9 41.12 ? SG CYS 402 A 1 
HETATM 7 O OXT CYS . . . C 2 37.284 -15.453 -11.688 0.9 45.23 ? OXT CYS 402 A 1 
#
_model_server_stats.io_time_ms              66 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           271 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           7 
#