data_4LMY # _model_server_result.job_id jQqx3tI38cA27N3k4rOXDQ _model_server_result.datetime_utc '2024-11-10 01:24:11' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4lmy # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":201}' # _entry.id 4LMY # _exptl.entry_id 4LMY _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 94.78 _cell.angle_gamma 90 _cell.entry_id 4LMY _cell.length_a 33.109 _cell.length_b 87.496 _cell.length_c 59.389 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4LMY _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 4 A HIS 4 1_555 C ZN ZN . A ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.194 ? metalc ? metalc2 A NE2 HIS 6 A HIS 6 1_555 C ZN ZN . A ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.225 ? metalc ? metalc3 A ND2 ASN 15 A ASN 15 1_555 C ZN ZN . A ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.202 ? metalc ? metalc4 A NE2 HIS 19 A HIS 19 1_555 C ZN ZN . A ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.187 ? metalc ? metalc5 A NE2 HIS 97 A HIS 97 1_555 C ZN ZN . A ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.235 ? metalc ? metalc6 A NE2 HIS 99 A HIS 99 1_555 C ZN ZN . A ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.159 ? metalc ? metalc7 A SG CYS 104 A CYS 104 1_555 D ZN ZN . A ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.36 ? metalc ? metalc8 A SG CYS 107 A CYS 107 1_555 D ZN ZN . A ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.311 ? metalc ? metalc9 A SG CYS 144 A CYS 144 1_555 D ZN ZN . A ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.313 ? metalc ? metalc10 A SG CYS 147 A CYS 147 1_555 D ZN ZN . A ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.36 ? metalc ? metalc11 B NE2 HIS 4 B HIS 4 1_555 E ZN ZN . B ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.197 ? metalc ? metalc12 B NE2 HIS 6 B HIS 6 1_555 E ZN ZN . B ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.154 ? metalc ? metalc13 B ND2 ASN 15 B ASN 15 1_555 E ZN ZN . B ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.205 ? metalc ? metalc14 B NE2 HIS 19 B HIS 19 1_555 E ZN ZN . B ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.16 ? metalc ? metalc15 B NE2 HIS 97 B HIS 97 1_555 E ZN ZN . B ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.197 ? metalc ? metalc16 B NE2 HIS 99 B HIS 99 1_555 E ZN ZN . B ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.143 ? metalc ? metalc17 B SG CYS 104 B CYS 104 1_555 F ZN ZN . B ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.282 ? metalc ? metalc18 B SG CYS 107 B CYS 107 1_555 F ZN ZN . B ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.339 ? metalc ? metalc19 B SG CYS 144 B CYS 144 1_555 F ZN ZN . B ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.263 ? metalc ? metalc20 B SG CYS 147 B CYS 147 1_555 F ZN ZN . B ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.377 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4LMY _atom_sites.fract_transf_matrix[1][1] 0.030203 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002527 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011429 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016897 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ZN A 1 201 1 ZN ZN . D 2 ZN A 1 202 3 ZN ZN . E 2 ZN B 1 201 2 ZN ZN . F 2 ZN B 1 202 4 ZN ZN . G 3 HOH A 1 301 1 HOH HOH . G 3 HOH A 2 302 4 HOH HOH . G 3 HOH A 3 303 6 HOH HOH . G 3 HOH A 4 304 8 HOH HOH . G 3 HOH A 5 305 10 HOH HOH . G 3 HOH A 6 306 13 HOH HOH . G 3 HOH A 7 307 19 HOH HOH . G 3 HOH A 8 308 20 HOH HOH . G 3 HOH A 9 309 21 HOH HOH . G 3 HOH A 10 310 22 HOH HOH . G 3 HOH A 11 311 27 HOH HOH . G 3 HOH A 12 312 28 HOH HOH . G 3 HOH A 13 313 33 HOH HOH . G 3 HOH A 14 314 34 HOH HOH . G 3 HOH A 15 315 35 HOH HOH . G 3 HOH A 16 316 38 HOH HOH . G 3 HOH A 17 317 41 HOH HOH . G 3 HOH A 18 318 42 HOH HOH . G 3 HOH A 19 319 43 HOH HOH . G 3 HOH A 20 320 44 HOH HOH . G 3 HOH A 21 321 46 HOH HOH . G 3 HOH A 22 322 47 HOH HOH . G 3 HOH A 23 323 48 HOH HOH . G 3 HOH A 24 324 49 HOH HOH . G 3 HOH A 25 325 51 HOH HOH . G 3 HOH A 26 326 52 HOH HOH . G 3 HOH A 27 327 53 HOH HOH . G 3 HOH A 28 328 56 HOH HOH . G 3 HOH A 29 329 58 HOH HOH . G 3 HOH A 30 330 59 HOH HOH . G 3 HOH A 31 331 66 HOH HOH . G 3 HOH A 32 332 68 HOH HOH . G 3 HOH A 33 333 69 HOH HOH . G 3 HOH A 34 334 70 HOH HOH . G 3 HOH A 35 335 72 HOH HOH . G 3 HOH A 36 336 73 HOH HOH . G 3 HOH A 37 337 74 HOH HOH . G 3 HOH A 38 338 75 HOH HOH . G 3 HOH A 39 339 81 HOH HOH . G 3 HOH A 40 340 82 HOH HOH . G 3 HOH A 41 341 83 HOH HOH . G 3 HOH A 42 342 84 HOH HOH . G 3 HOH A 43 343 87 HOH HOH . G 3 HOH A 44 344 89 HOH HOH . G 3 HOH A 45 345 92 HOH HOH . G 3 HOH A 46 346 93 HOH HOH . G 3 HOH A 47 347 94 HOH HOH . G 3 HOH A 48 348 95 HOH HOH . G 3 HOH A 49 349 96 HOH HOH . G 3 HOH A 50 350 98 HOH HOH . G 3 HOH A 51 351 101 HOH HOH . G 3 HOH A 52 352 103 HOH HOH . G 3 HOH A 53 353 104 HOH HOH . G 3 HOH A 54 354 105 HOH HOH . G 3 HOH A 55 355 106 HOH HOH . G 3 HOH A 56 356 108 HOH HOH . G 3 HOH A 57 357 109 HOH HOH . G 3 HOH A 58 358 110 HOH HOH . G 3 HOH A 59 359 111 HOH HOH . G 3 HOH A 60 360 112 HOH HOH . G 3 HOH A 61 361 115 HOH HOH . G 3 HOH A 62 362 116 HOH HOH . G 3 HOH A 63 363 117 HOH HOH . G 3 HOH A 64 364 121 HOH HOH . G 3 HOH A 65 365 122 HOH HOH . G 3 HOH A 66 366 123 HOH HOH . G 3 HOH A 67 367 124 HOH HOH . G 3 HOH A 68 368 128 HOH HOH . G 3 HOH A 69 369 129 HOH HOH . G 3 HOH A 70 370 130 HOH HOH . G 3 HOH A 71 371 131 HOH HOH . G 3 HOH A 72 372 132 HOH HOH . G 3 HOH A 73 373 136 HOH HOH . G 3 HOH A 74 374 138 HOH HOH . G 3 HOH A 75 375 139 HOH HOH . G 3 HOH A 76 376 141 HOH HOH . G 3 HOH A 77 377 146 HOH HOH . G 3 HOH A 78 378 147 HOH HOH . G 3 HOH A 79 379 148 HOH HOH . G 3 HOH A 80 380 151 HOH HOH . G 3 HOH A 81 381 152 HOH HOH . G 3 HOH A 82 382 153 HOH HOH . G 3 HOH A 83 383 154 HOH HOH . G 3 HOH A 84 384 155 HOH HOH . G 3 HOH A 85 385 156 HOH HOH . G 3 HOH A 86 386 158 HOH HOH . G 3 HOH A 87 387 162 HOH HOH . G 3 HOH A 88 388 163 HOH HOH . G 3 HOH A 89 389 164 HOH HOH . G 3 HOH A 90 390 165 HOH HOH . G 3 HOH A 91 391 166 HOH HOH . G 3 HOH A 92 392 167 HOH HOH . G 3 HOH A 93 393 169 HOH HOH . G 3 HOH A 94 394 170 HOH HOH . G 3 HOH A 95 395 173 HOH HOH . G 3 HOH A 96 396 174 HOH HOH . G 3 HOH A 97 397 175 HOH HOH . G 3 HOH A 98 398 177 HOH HOH . G 3 HOH A 99 399 178 HOH HOH . G 3 HOH A 100 400 180 HOH HOH . G 3 HOH A 101 401 181 HOH HOH . G 3 HOH A 102 402 182 HOH HOH . G 3 HOH A 103 403 183 HOH HOH . G 3 HOH A 104 404 184 HOH HOH . G 3 HOH A 105 405 185 HOH HOH . H 3 HOH B 1 301 2 HOH HOH . H 3 HOH B 2 302 3 HOH HOH . H 3 HOH B 3 303 5 HOH HOH . H 3 HOH B 4 304 7 HOH HOH . H 3 HOH B 5 305 9 HOH HOH . H 3 HOH B 6 306 11 HOH HOH . H 3 HOH B 7 307 12 HOH HOH . H 3 HOH B 8 308 14 HOH HOH . H 3 HOH B 9 309 15 HOH HOH . H 3 HOH B 10 310 16 HOH HOH . H 3 HOH B 11 311 17 HOH HOH . H 3 HOH B 12 312 18 HOH HOH . H 3 HOH B 13 313 23 HOH HOH . H 3 HOH B 14 314 24 HOH HOH . H 3 HOH B 15 315 25 HOH HOH . H 3 HOH B 16 316 26 HOH HOH . H 3 HOH B 17 317 29 HOH HOH . H 3 HOH B 18 318 30 HOH HOH . H 3 HOH B 19 319 31 HOH HOH . H 3 HOH B 20 320 32 HOH HOH . H 3 HOH B 21 321 36 HOH HOH . H 3 HOH B 22 322 37 HOH HOH . H 3 HOH B 23 323 39 HOH HOH . H 3 HOH B 24 324 40 HOH HOH . H 3 HOH B 25 325 45 HOH HOH . H 3 HOH B 26 326 50 HOH HOH . H 3 HOH B 27 327 54 HOH HOH . H 3 HOH B 28 328 55 HOH HOH . H 3 HOH B 29 329 57 HOH HOH . H 3 HOH B 30 330 60 HOH HOH . H 3 HOH B 31 331 61 HOH HOH . H 3 HOH B 32 332 62 HOH HOH . H 3 HOH B 33 333 63 HOH HOH . H 3 HOH B 34 334 64 HOH HOH . H 3 HOH B 35 335 65 HOH HOH . H 3 HOH B 36 336 67 HOH HOH . H 3 HOH B 37 337 71 HOH HOH . H 3 HOH B 38 338 76 HOH HOH . H 3 HOH B 39 339 77 HOH HOH . H 3 HOH B 40 340 78 HOH HOH . H 3 HOH B 41 341 79 HOH HOH . H 3 HOH B 42 342 80 HOH HOH . H 3 HOH B 43 343 85 HOH HOH . H 3 HOH B 44 344 86 HOH HOH . H 3 HOH B 45 345 88 HOH HOH . H 3 HOH B 46 346 90 HOH HOH . H 3 HOH B 47 347 91 HOH HOH . H 3 HOH B 48 348 97 HOH HOH . H 3 HOH B 49 349 99 HOH HOH . H 3 HOH B 50 350 100 HOH HOH . H 3 HOH B 51 351 102 HOH HOH . H 3 HOH B 52 352 107 HOH HOH . H 3 HOH B 53 353 113 HOH HOH . H 3 HOH B 54 354 114 HOH HOH . H 3 HOH B 55 355 118 HOH HOH . H 3 HOH B 56 356 119 HOH HOH . H 3 HOH B 57 357 120 HOH HOH . H 3 HOH B 58 358 125 HOH HOH . H 3 HOH B 59 359 126 HOH HOH . H 3 HOH B 60 360 127 HOH HOH . H 3 HOH B 61 361 133 HOH HOH . H 3 HOH B 62 362 134 HOH HOH . H 3 HOH B 63 363 135 HOH HOH . H 3 HOH B 64 364 137 HOH HOH . H 3 HOH B 65 365 140 HOH HOH . H 3 HOH B 66 366 142 HOH HOH . H 3 HOH B 67 367 143 HOH HOH . H 3 HOH B 68 368 144 HOH HOH . H 3 HOH B 69 369 145 HOH HOH . H 3 HOH B 70 370 149 HOH HOH . H 3 HOH B 71 371 150 HOH HOH . H 3 HOH B 72 372 157 HOH HOH . H 3 HOH B 73 373 159 HOH HOH . H 3 HOH B 74 374 160 HOH HOH . H 3 HOH B 75 375 161 HOH HOH . H 3 HOH B 76 376 168 HOH HOH . H 3 HOH B 77 377 171 HOH HOH . H 3 HOH B 78 378 172 HOH HOH . H 3 HOH B 79 379 176 HOH HOH . H 3 HOH B 80 380 179 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 2 _atom_site.Cartn_x 4.512 _atom_site.Cartn_y 25.628 _atom_site.Cartn_z 2.059 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 25.51 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 201 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 19 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 333 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #