data_4LQB # _model_server_result.job_id -sTMz17hiyJsWtJPTs2ESQ _model_server_result.datetime_utc '2024-11-23 01:25:38' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4lqb # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":201}' # _entry.id 4LQB # _exptl.entry_id 4LQB _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 192.124 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CITRIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4LQB _cell.length_a 49.61 _cell.length_b 56.053 _cell.length_c 80.436 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4LQB _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C ALA 3 A ALA 0 1_555 A N MSE 4 A MSE 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale2 A C MSE 4 A MSE 1 1_555 A N HIS 5 A HIS 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale3 B C ALA 3 B ALA 0 1_555 B N MSE 4 B MSE 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.34 ? covale ? covale4 B C MSE 4 B MSE 1 1_555 B N HIS 5 B HIS 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? # _chem_comp.formula 'C6 H8 O7' _chem_comp.formula_weight 192.124 _chem_comp.id CIT _chem_comp.mon_nstd_flag . _chem_comp.name 'CITRIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 CIT doub 70 n n C1 O2 CIT sing 71 n n C1 C2 CIT sing 72 n n O2 HO2 CIT sing 73 n n C2 C3 CIT sing 74 n n C2 H21 CIT sing 75 n n C2 H22 CIT sing 76 n n C3 O7 CIT sing 77 n n C3 C4 CIT sing 78 n n C3 C6 CIT sing 79 n n O7 HO7 CIT sing 80 n n C4 C5 CIT sing 81 n n C4 H41 CIT sing 82 n n C4 H42 CIT sing 83 n n C5 O3 CIT doub 84 n n C5 O4 CIT sing 85 n n O4 HO4 CIT sing 86 n n C6 O5 CIT doub 87 n n C6 O6 CIT sing 88 n n O6 HO6 CIT sing 89 n n # _atom_sites.entry_id 4LQB _atom_sites.fract_transf_matrix[1][1] 0.020157 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01784 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012432 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 GOL A 1 201 201 GOL GOL . D 2 GOL A 1 202 202 GOL GOL . E 3 CIT B 1 201 201 CIT CIT . F 2 GOL B 1 202 202 GOL GOL . G 4 HOH A 1 301 2 HOH HOH . G 4 HOH A 2 302 5 HOH HOH . G 4 HOH A 3 303 6 HOH HOH . G 4 HOH A 4 304 7 HOH HOH . G 4 HOH A 5 305 8 HOH HOH . G 4 HOH A 6 306 11 HOH HOH . G 4 HOH A 7 307 15 HOH HOH . G 4 HOH A 8 308 16 HOH HOH . G 4 HOH A 9 309 17 HOH HOH . G 4 HOH A 10 310 18 HOH HOH . G 4 HOH A 11 311 20 HOH HOH . G 4 HOH A 12 312 21 HOH HOH . G 4 HOH A 13 313 25 HOH HOH . G 4 HOH A 14 314 26 HOH HOH . G 4 HOH A 15 315 28 HOH HOH . G 4 HOH A 16 316 29 HOH HOH . G 4 HOH A 17 317 30 HOH HOH . G 4 HOH A 18 318 34 HOH HOH . G 4 HOH A 19 319 35 HOH HOH . G 4 HOH A 20 320 37 HOH HOH . G 4 HOH A 21 321 38 HOH HOH . G 4 HOH A 22 322 39 HOH HOH . G 4 HOH A 23 323 41 HOH HOH . G 4 HOH A 24 324 44 HOH HOH . G 4 HOH A 25 325 49 HOH HOH . G 4 HOH A 26 326 50 HOH HOH . G 4 HOH A 27 327 52 HOH HOH . G 4 HOH A 28 328 53 HOH HOH . G 4 HOH A 29 329 55 HOH HOH . G 4 HOH A 30 330 56 HOH HOH . G 4 HOH A 31 331 57 HOH HOH . G 4 HOH A 32 332 58 HOH HOH . G 4 HOH A 33 333 61 HOH HOH . G 4 HOH A 34 334 63 HOH HOH . G 4 HOH A 35 335 64 HOH HOH . G 4 HOH A 36 336 65 HOH HOH . G 4 HOH A 37 337 66 HOH HOH . G 4 HOH A 38 338 67 HOH HOH . G 4 HOH A 39 339 68 HOH HOH . G 4 HOH A 40 340 69 HOH HOH . G 4 HOH A 41 341 70 HOH HOH . G 4 HOH A 42 342 72 HOH HOH . G 4 HOH A 43 343 74 HOH HOH . G 4 HOH A 44 344 76 HOH HOH . G 4 HOH A 45 345 78 HOH HOH . G 4 HOH A 46 346 81 HOH HOH . G 4 HOH A 47 347 85 HOH HOH . G 4 HOH A 48 348 87 HOH HOH . G 4 HOH A 49 349 88 HOH HOH . G 4 HOH A 50 350 90 HOH HOH . G 4 HOH A 51 351 91 HOH HOH . G 4 HOH A 52 352 93 HOH HOH . G 4 HOH A 53 353 94 HOH HOH . G 4 HOH A 54 354 95 HOH HOH . G 4 HOH A 55 355 96 HOH HOH . G 4 HOH A 56 356 100 HOH HOH . G 4 HOH A 57 357 102 HOH HOH . G 4 HOH A 58 358 103 HOH HOH . G 4 HOH A 59 359 104 HOH HOH . G 4 HOH A 60 360 105 HOH HOH . G 4 HOH A 61 361 106 HOH HOH . G 4 HOH A 62 362 107 HOH HOH . G 4 HOH A 63 363 108 HOH HOH . G 4 HOH A 64 364 110 HOH HOH . G 4 HOH A 65 365 112 HOH HOH . G 4 HOH A 66 366 113 HOH HOH . G 4 HOH A 67 367 121 HOH HOH . G 4 HOH A 68 368 122 HOH HOH . G 4 HOH A 69 369 124 HOH HOH . G 4 HOH A 70 370 131 HOH HOH . G 4 HOH A 71 371 132 HOH HOH . G 4 HOH A 72 372 133 HOH HOH . G 4 HOH A 73 373 134 HOH HOH . G 4 HOH A 74 374 135 HOH HOH . G 4 HOH A 75 375 137 HOH HOH . G 4 HOH A 76 376 142 HOH HOH . G 4 HOH A 77 377 143 HOH HOH . G 4 HOH A 78 378 144 HOH HOH . G 4 HOH A 79 379 146 HOH HOH . G 4 HOH A 80 380 149 HOH HOH . G 4 HOH A 81 381 150 HOH HOH . G 4 HOH A 82 382 153 HOH HOH . G 4 HOH A 83 383 155 HOH HOH . G 4 HOH A 84 384 160 HOH HOH . G 4 HOH A 85 385 161 HOH HOH . G 4 HOH A 86 386 163 HOH HOH . G 4 HOH A 87 387 164 HOH HOH . G 4 HOH A 88 388 165 HOH HOH . G 4 HOH A 89 389 166 HOH HOH . G 4 HOH A 90 390 167 HOH HOH . G 4 HOH A 91 391 168 HOH HOH . G 4 HOH A 92 392 169 HOH HOH . G 4 HOH A 93 393 171 HOH HOH . G 4 HOH A 94 394 173 HOH HOH . G 4 HOH A 95 395 174 HOH HOH . G 4 HOH A 96 396 175 HOH HOH . G 4 HOH A 97 397 178 HOH HOH . G 4 HOH A 98 398 180 HOH HOH . G 4 HOH A 99 399 182 HOH HOH . G 4 HOH A 100 400 183 HOH HOH . G 4 HOH A 101 401 184 HOH HOH . G 4 HOH A 102 402 185 HOH HOH . G 4 HOH A 103 403 187 HOH HOH . G 4 HOH A 104 404 189 HOH HOH . G 4 HOH A 105 405 190 HOH HOH . G 4 HOH A 106 406 192 HOH HOH . G 4 HOH A 107 407 194 HOH HOH . G 4 HOH A 108 408 196 HOH HOH . G 4 HOH A 109 409 198 HOH HOH . G 4 HOH A 110 410 199 HOH HOH . G 4 HOH A 111 411 205 HOH HOH . G 4 HOH A 112 412 208 HOH HOH . G 4 HOH A 113 413 212 HOH HOH . G 4 HOH A 114 414 217 HOH HOH . G 4 HOH A 115 415 218 HOH HOH . G 4 HOH A 116 416 219 HOH HOH . G 4 HOH A 117 417 220 HOH HOH . G 4 HOH A 118 418 221 HOH HOH . G 4 HOH A 119 419 224 HOH HOH . G 4 HOH A 120 420 229 HOH HOH . G 4 HOH A 121 421 230 HOH HOH . G 4 HOH A 122 422 231 HOH HOH . G 4 HOH A 123 423 232 HOH HOH . H 4 HOH B 1 301 14 HOH HOH . H 4 HOH B 2 302 1 HOH HOH . H 4 HOH B 3 303 3 HOH HOH . H 4 HOH B 4 304 4 HOH HOH . H 4 HOH B 5 305 9 HOH HOH . H 4 HOH B 6 306 10 HOH HOH . H 4 HOH B 7 307 12 HOH HOH . H 4 HOH B 8 308 13 HOH HOH . H 4 HOH B 9 309 19 HOH HOH . H 4 HOH B 10 310 22 HOH HOH . H 4 HOH B 11 311 23 HOH HOH . H 4 HOH B 12 312 24 HOH HOH . H 4 HOH B 13 313 27 HOH HOH . H 4 HOH B 14 314 31 HOH HOH . H 4 HOH B 15 315 32 HOH HOH . H 4 HOH B 16 316 33 HOH HOH . H 4 HOH B 17 317 36 HOH HOH . H 4 HOH B 18 318 40 HOH HOH . H 4 HOH B 19 319 42 HOH HOH . H 4 HOH B 20 320 43 HOH HOH . H 4 HOH B 21 321 45 HOH HOH . H 4 HOH B 22 322 46 HOH HOH . H 4 HOH B 23 323 47 HOH HOH . H 4 HOH B 24 324 48 HOH HOH . H 4 HOH B 25 325 51 HOH HOH . H 4 HOH B 26 326 54 HOH HOH . H 4 HOH B 27 327 59 HOH HOH . H 4 HOH B 28 328 60 HOH HOH . H 4 HOH B 29 329 62 HOH HOH . H 4 HOH B 30 330 71 HOH HOH . H 4 HOH B 31 331 73 HOH HOH . H 4 HOH B 32 332 75 HOH HOH . H 4 HOH B 33 333 77 HOH HOH . H 4 HOH B 34 334 79 HOH HOH . H 4 HOH B 35 335 80 HOH HOH . H 4 HOH B 36 336 82 HOH HOH . H 4 HOH B 37 337 83 HOH HOH . H 4 HOH B 38 338 84 HOH HOH . H 4 HOH B 39 339 86 HOH HOH . H 4 HOH B 40 340 89 HOH HOH . H 4 HOH B 41 341 92 HOH HOH . H 4 HOH B 42 342 97 HOH HOH . H 4 HOH B 43 343 98 HOH HOH . H 4 HOH B 44 344 99 HOH HOH . H 4 HOH B 45 345 101 HOH HOH . H 4 HOH B 46 346 109 HOH HOH . H 4 HOH B 47 347 111 HOH HOH . H 4 HOH B 48 348 114 HOH HOH . H 4 HOH B 49 349 115 HOH HOH . H 4 HOH B 50 350 116 HOH HOH . H 4 HOH B 51 351 117 HOH HOH . H 4 HOH B 52 352 118 HOH HOH . H 4 HOH B 53 353 119 HOH HOH . H 4 HOH B 54 354 120 HOH HOH . H 4 HOH B 55 355 123 HOH HOH . H 4 HOH B 56 356 125 HOH HOH . H 4 HOH B 57 357 126 HOH HOH . H 4 HOH B 58 358 127 HOH HOH . H 4 HOH B 59 359 128 HOH HOH . H 4 HOH B 60 360 129 HOH HOH . H 4 HOH B 61 361 130 HOH HOH . H 4 HOH B 62 362 136 HOH HOH . H 4 HOH B 63 363 138 HOH HOH . H 4 HOH B 64 364 139 HOH HOH . H 4 HOH B 65 365 140 HOH HOH . H 4 HOH B 66 366 141 HOH HOH . H 4 HOH B 67 367 145 HOH HOH . H 4 HOH B 68 368 147 HOH HOH . H 4 HOH B 69 369 148 HOH HOH . H 4 HOH B 70 370 151 HOH HOH . H 4 HOH B 71 371 152 HOH HOH . H 4 HOH B 72 372 154 HOH HOH . H 4 HOH B 73 373 156 HOH HOH . H 4 HOH B 74 374 157 HOH HOH . H 4 HOH B 75 375 158 HOH HOH . H 4 HOH B 76 376 159 HOH HOH . H 4 HOH B 77 377 162 HOH HOH . H 4 HOH B 78 378 170 HOH HOH . H 4 HOH B 79 379 172 HOH HOH . H 4 HOH B 80 380 176 HOH HOH . H 4 HOH B 81 381 177 HOH HOH . H 4 HOH B 82 382 179 HOH HOH . H 4 HOH B 83 383 181 HOH HOH . H 4 HOH B 84 384 186 HOH HOH . H 4 HOH B 85 385 188 HOH HOH . H 4 HOH B 86 386 191 HOH HOH . H 4 HOH B 87 387 193 HOH HOH . H 4 HOH B 88 388 195 HOH HOH . H 4 HOH B 89 389 197 HOH HOH . H 4 HOH B 90 390 200 HOH HOH . H 4 HOH B 91 391 201 HOH HOH . H 4 HOH B 92 392 202 HOH HOH . H 4 HOH B 93 393 203 HOH HOH . H 4 HOH B 94 394 204 HOH HOH . H 4 HOH B 95 395 206 HOH HOH . H 4 HOH B 96 396 207 HOH HOH . H 4 HOH B 97 397 209 HOH HOH . H 4 HOH B 98 398 210 HOH HOH . H 4 HOH B 99 399 211 HOH HOH . H 4 HOH B 100 400 213 HOH HOH . H 4 HOH B 101 401 214 HOH HOH . H 4 HOH B 102 402 215 HOH HOH . H 4 HOH B 103 403 216 HOH HOH . H 4 HOH B 104 404 222 HOH HOH . H 4 HOH B 105 405 223 HOH HOH . H 4 HOH B 106 406 225 HOH HOH . H 4 HOH B 107 407 226 HOH HOH . H 4 HOH B 108 408 227 HOH HOH . H 4 HOH B 109 409 228 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 CIT . . . E 3 62.288 13.535 -3.104 1 20.42 ? C1 CIT 201 B 1 HETATM 2 O O1 CIT . . . E 3 61.726 12.436 -2.905 1 21.8 ? O1 CIT 201 B 1 HETATM 3 O O2 CIT . . . E 3 63.017 13.765 -4.089 1 23.16 ? O2 CIT 201 B 1 HETATM 4 C C2 CIT . . . E 3 62.097 14.65 -2.105 1 18.18 ? C2 CIT 201 B 1 HETATM 5 C C3 CIT . . . E 3 62.312 14.154 -0.679 1 16.57 ? C3 CIT 201 B 1 HETATM 6 O O7 CIT . . . E 3 61.32 13.161 -0.404 1 15.99 ? O7 CIT 201 B 1 HETATM 7 C C4 CIT . . . E 3 63.719 13.561 -0.489 1 15.98 ? C4 CIT 201 B 1 HETATM 8 C C5 CIT . . . E 3 64.045 13.197 0.95 1 15.19 ? C5 CIT 201 B 1 HETATM 9 O O3 CIT . . . E 3 63.224 13.416 1.867 1 14.1 ? O3 CIT 201 B 1 HETATM 10 O O4 CIT . . . E 3 65.155 12.68 1.178 1 15.24 ? O4 CIT 201 B 1 HETATM 11 C C6 CIT . . . E 3 62.089 15.348 0.221 1 16.04 ? C6 CIT 201 B 1 HETATM 12 O O5 CIT . . . E 3 60.967 15.499 0.746 1 16.93 ? O5 CIT 201 B 1 HETATM 13 O O6 CIT . . . E 3 63.029 16.147 0.416 1 16.67 ? O6 CIT 201 B 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 25 _model_server_stats.query_time_ms 299 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 13 #