data_4LQK # _model_server_result.job_id HmoJnDCaf_j2tB5x1grb0w _model_server_result.datetime_utc '2024-10-28 02:24:04' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4lqk # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":302}' # _entry.id 4LQK # _exptl.entry_id 4LQK _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 22.99 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SODIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4LQK _cell.length_a 107.114 _cell.length_b 107.633 _cell.length_c 137.899 _cell.Z_PDB 32 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4LQK _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,H,I 1 1 C,D,F,G,J,K 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 C SG CYS 69 A CYS 155 1_555 C SG CYS 70 A CYS 156 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.06 ? covale ? covale1 A C LEU 27 C LEU 113 1_555 A N MSE 28 C MSE 114 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? covale ? covale2 A C MSE 28 C MSE 114 1_555 A N THR 29 C THR 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale3 A C ASP 66 C ASP 152 1_555 A N MSE 67 C MSE 153 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? covale ? covale4 A C MSE 67 C MSE 153 1_555 A N ILE 68 C ILE 154 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale5 A C CYS 95 C CYS 181 1_555 A N MSE 96 C MSE 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? covale ? covale6 A C MSE 96 C MSE 182 1_555 A N ALA 97 C ALA 183 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale7 B C LEU 27 D LEU 113 1_555 B N MSE 28 D MSE 114 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale8 B C MSE 28 D MSE 114 1_555 B N THR 29 D THR 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale9 B C ASP 66 D ASP 152 1_555 B N MSE 67 D MSE 153 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale10 B C MSE 67 D MSE 153 1_555 B N ILE 68 D ILE 154 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale11 B C CYS 95 D CYS 181 1_555 B N MSE 96 D MSE 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale12 B C MSE 96 D MSE 182 1_555 B N ALA 97 D ALA 183 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.321 ? covale ? covale13 C C LEU 27 A LEU 113 1_555 C N MSE 28 A MSE 114 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale14 C C MSE 28 A MSE 114 1_555 C N THR 29 A THR 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? covale ? covale15 C C ASP 66 A ASP 152 1_555 C N MSE 67 A MSE 153 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale16 C C MSE 67 A MSE 153 1_555 C N ILE 68 A ILE 154 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale17 C C CYS 95 A CYS 181 1_555 C N MSE 96 A MSE 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale18 C C MSE 96 A MSE 182 1_555 C N ALA 97 A ALA 183 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? covale ? covale19 D C LEU 27 B LEU 113 1_555 D N MSE 28 B MSE 114 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale20 D C MSE 28 B MSE 114 1_555 D N THR 29 B THR 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale21 D C ASP 66 B ASP 152 1_555 D N MSE 67 B MSE 153 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.338 ? covale ? covale22 D C MSE 67 B MSE 153 1_555 D N ILE 68 B ILE 154 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.339 ? covale ? covale23 D C CYS 95 B CYS 181 1_555 D N MSE 96 B MSE 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale24 D C MSE 96 B MSE 182 1_555 D N ALA 97 B ALA 183 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? metalc ? metalc1 D OG SER 119 B SER 205 1_555 G NA NA . B NA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.054 ? metalc ? metalc2 B OG SER 119 D SER 205 1_555 E NA NA . D NA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.099 ? # _chem_comp.formula 'Na 1' _chem_comp.formula_weight 22.99 _chem_comp.id NA _chem_comp.mon_nstd_flag . _chem_comp.name 'SODIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4LQK _atom_sites.fract_transf_matrix[1][1] 0.009336 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009291 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007252 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 NA D 1 301 1 NA NA . F 3 BR B 1 301 1 BR BR . G 2 NA B 1 302 1 NA NA . H 4 HOH C 1 301 5 HOH HOH . H 4 HOH C 2 302 9 HOH HOH . H 4 HOH C 3 303 23 HOH HOH . H 4 HOH C 4 304 24 HOH HOH . H 4 HOH C 5 305 27 HOH HOH . H 4 HOH C 6 306 37 HOH HOH . H 4 HOH C 7 307 38 HOH HOH . H 4 HOH C 8 308 44 HOH HOH . H 4 HOH C 9 309 52 HOH HOH . H 4 HOH C 10 310 62 HOH HOH . H 4 HOH C 11 311 66 HOH HOH . H 4 HOH C 12 312 79 HOH HOH . H 4 HOH C 13 313 80 HOH HOH . H 4 HOH C 14 314 81 HOH HOH . H 4 HOH C 15 315 83 HOH HOH . H 4 HOH C 16 316 84 HOH HOH . H 4 HOH C 17 317 87 HOH HOH . H 4 HOH C 18 318 90 HOH HOH . H 4 HOH C 19 319 93 HOH HOH . H 4 HOH C 20 320 100 HOH HOH . H 4 HOH C 21 321 101 HOH HOH . H 4 HOH C 22 322 105 HOH HOH . H 4 HOH C 23 323 114 HOH HOH . H 4 HOH C 24 324 135 HOH HOH . H 4 HOH C 25 325 136 HOH HOH . H 4 HOH C 26 326 138 HOH HOH . H 4 HOH C 27 327 142 HOH HOH . H 4 HOH C 28 328 146 HOH HOH . H 4 HOH C 29 329 154 HOH HOH . H 4 HOH C 30 330 161 HOH HOH . H 4 HOH C 31 331 162 HOH HOH . H 4 HOH C 32 332 177 HOH HOH . H 4 HOH C 33 333 179 HOH HOH . H 4 HOH C 34 334 197 HOH HOH . H 4 HOH C 35 335 226 HOH HOH . H 4 HOH C 36 336 296 HOH HOH . H 4 HOH C 37 337 307 HOH HOH . H 4 HOH C 38 338 309 HOH HOH . H 4 HOH C 39 339 312 HOH HOH . H 4 HOH C 40 340 315 HOH HOH . H 4 HOH C 41 341 331 HOH HOH . H 4 HOH C 42 342 335 HOH HOH . H 4 HOH C 43 343 336 HOH HOH . H 4 HOH C 44 344 340 HOH HOH . H 4 HOH C 45 345 341 HOH HOH . H 4 HOH C 46 346 346 HOH HOH . H 4 HOH C 47 347 358 HOH HOH . H 4 HOH C 48 348 359 HOH HOH . H 4 HOH C 49 349 366 HOH HOH . H 4 HOH C 50 350 367 HOH HOH . H 4 HOH C 51 351 368 HOH HOH . I 4 HOH D 1 401 7 HOH HOH . I 4 HOH D 2 402 12 HOH HOH . I 4 HOH D 3 403 13 HOH HOH . I 4 HOH D 4 404 20 HOH HOH . I 4 HOH D 5 405 21 HOH HOH . I 4 HOH D 6 406 25 HOH HOH . I 4 HOH D 7 407 29 HOH HOH . I 4 HOH D 8 408 30 HOH HOH . I 4 HOH D 9 409 34 HOH HOH . I 4 HOH D 10 410 43 HOH HOH . I 4 HOH D 11 411 45 HOH HOH . I 4 HOH D 12 412 50 HOH HOH . I 4 HOH D 13 413 55 HOH HOH . I 4 HOH D 14 414 58 HOH HOH . I 4 HOH D 15 415 59 HOH HOH . I 4 HOH D 16 416 60 HOH HOH . I 4 HOH D 17 417 69 HOH HOH . I 4 HOH D 18 418 72 HOH HOH . I 4 HOH D 19 419 73 HOH HOH . I 4 HOH D 20 420 74 HOH HOH . I 4 HOH D 21 421 82 HOH HOH . I 4 HOH D 22 422 88 HOH HOH . I 4 HOH D 23 423 92 HOH HOH . I 4 HOH D 24 424 94 HOH HOH . I 4 HOH D 25 425 106 HOH HOH . I 4 HOH D 26 426 115 HOH HOH . I 4 HOH D 27 427 120 HOH HOH . I 4 HOH D 28 428 121 HOH HOH . I 4 HOH D 29 429 122 HOH HOH . I 4 HOH D 30 430 123 HOH HOH . I 4 HOH D 31 431 126 HOH HOH . I 4 HOH D 32 432 139 HOH HOH . I 4 HOH D 33 433 155 HOH HOH . I 4 HOH D 34 434 178 HOH HOH . I 4 HOH D 35 435 195 HOH HOH . I 4 HOH D 36 436 202 HOH HOH . I 4 HOH D 37 437 205 HOH HOH . I 4 HOH D 38 438 209 HOH HOH . I 4 HOH D 39 439 211 HOH HOH . I 4 HOH D 40 440 214 HOH HOH . I 4 HOH D 41 441 230 HOH HOH . I 4 HOH D 42 442 236 HOH HOH . I 4 HOH D 43 443 241 HOH HOH . I 4 HOH D 44 444 259 HOH HOH . I 4 HOH D 45 445 305 HOH HOH . I 4 HOH D 46 446 308 HOH HOH . I 4 HOH D 47 447 311 HOH HOH . I 4 HOH D 48 448 317 HOH HOH . I 4 HOH D 49 449 320 HOH HOH . I 4 HOH D 50 450 321 HOH HOH . I 4 HOH D 51 451 325 HOH HOH . I 4 HOH D 52 452 343 HOH HOH . I 4 HOH D 53 453 349 HOH HOH . I 4 HOH D 54 454 350 HOH HOH . I 4 HOH D 55 455 353 HOH HOH . I 4 HOH D 56 456 364 HOH HOH . J 4 HOH A 1 301 2 HOH HOH . J 4 HOH A 2 302 3 HOH HOH . J 4 HOH A 3 303 14 HOH HOH . J 4 HOH A 4 304 17 HOH HOH . J 4 HOH A 5 305 26 HOH HOH . J 4 HOH A 6 306 28 HOH HOH . J 4 HOH A 7 307 32 HOH HOH . J 4 HOH A 8 308 33 HOH HOH . J 4 HOH A 9 309 39 HOH HOH . J 4 HOH A 10 310 40 HOH HOH . J 4 HOH A 11 311 49 HOH HOH . J 4 HOH A 12 312 51 HOH HOH . J 4 HOH A 13 313 61 HOH HOH . J 4 HOH A 14 314 64 HOH HOH . J 4 HOH A 15 315 65 HOH HOH . J 4 HOH A 16 316 67 HOH HOH . J 4 HOH A 17 317 71 HOH HOH . J 4 HOH A 18 318 78 HOH HOH . J 4 HOH A 19 319 85 HOH HOH . J 4 HOH A 20 320 91 HOH HOH . J 4 HOH A 21 321 98 HOH HOH . J 4 HOH A 22 322 103 HOH HOH . J 4 HOH A 23 323 108 HOH HOH . J 4 HOH A 24 324 110 HOH HOH . J 4 HOH A 25 325 112 HOH HOH . J 4 HOH A 26 326 124 HOH HOH . J 4 HOH A 27 327 125 HOH HOH . J 4 HOH A 28 328 128 HOH HOH . J 4 HOH A 29 329 129 HOH HOH . J 4 HOH A 30 330 131 HOH HOH . J 4 HOH A 31 331 132 HOH HOH . J 4 HOH A 32 332 137 HOH HOH . J 4 HOH A 33 333 140 HOH HOH . J 4 HOH A 34 334 141 HOH HOH . J 4 HOH A 35 335 159 HOH HOH . J 4 HOH A 36 336 180 HOH HOH . J 4 HOH A 37 337 185 HOH HOH . J 4 HOH A 38 338 198 HOH HOH . J 4 HOH A 39 339 207 HOH HOH . J 4 HOH A 40 340 232 HOH HOH . J 4 HOH A 41 341 238 HOH HOH . J 4 HOH A 42 342 239 HOH HOH . J 4 HOH A 43 343 254 HOH HOH . J 4 HOH A 44 344 267 HOH HOH . J 4 HOH A 45 345 282 HOH HOH . J 4 HOH A 46 346 322 HOH HOH . J 4 HOH A 47 347 329 HOH HOH . J 4 HOH A 48 348 330 HOH HOH . J 4 HOH A 49 349 337 HOH HOH . J 4 HOH A 50 350 338 HOH HOH . J 4 HOH A 51 351 345 HOH HOH . J 4 HOH A 52 352 351 HOH HOH . J 4 HOH A 53 353 356 HOH HOH . J 4 HOH A 54 354 357 HOH HOH . J 4 HOH A 55 355 362 HOH HOH . J 4 HOH A 56 356 365 HOH HOH . J 4 HOH A 57 357 369 HOH HOH . K 4 HOH B 1 401 1 HOH HOH . K 4 HOH B 2 402 4 HOH HOH . K 4 HOH B 3 403 6 HOH HOH . K 4 HOH B 4 404 8 HOH HOH . K 4 HOH B 5 405 10 HOH HOH . K 4 HOH B 6 406 15 HOH HOH . K 4 HOH B 7 407 16 HOH HOH . K 4 HOH B 8 408 19 HOH HOH . K 4 HOH B 9 409 22 HOH HOH . K 4 HOH B 10 410 31 HOH HOH . K 4 HOH B 11 411 35 HOH HOH . K 4 HOH B 12 412 36 HOH HOH . K 4 HOH B 13 413 41 HOH HOH . K 4 HOH B 14 414 42 HOH HOH . K 4 HOH B 15 415 46 HOH HOH . K 4 HOH B 16 416 47 HOH HOH . K 4 HOH B 17 417 53 HOH HOH . K 4 HOH B 18 418 54 HOH HOH . K 4 HOH B 19 419 57 HOH HOH . K 4 HOH B 20 420 63 HOH HOH . K 4 HOH B 21 421 68 HOH HOH . K 4 HOH B 22 422 70 HOH HOH . K 4 HOH B 23 423 75 HOH HOH . K 4 HOH B 24 424 76 HOH HOH . K 4 HOH B 25 425 77 HOH HOH . K 4 HOH B 26 426 86 HOH HOH . K 4 HOH B 27 427 89 HOH HOH . K 4 HOH B 28 428 95 HOH HOH . K 4 HOH B 29 429 96 HOH HOH . K 4 HOH B 30 430 97 HOH HOH . K 4 HOH B 31 431 99 HOH HOH . K 4 HOH B 32 432 102 HOH HOH . K 4 HOH B 33 433 107 HOH HOH . K 4 HOH B 34 434 117 HOH HOH . K 4 HOH B 35 435 145 HOH HOH . K 4 HOH B 36 436 148 HOH HOH . K 4 HOH B 37 437 149 HOH HOH . K 4 HOH B 38 438 160 HOH HOH . K 4 HOH B 39 439 170 HOH HOH . K 4 HOH B 40 440 172 HOH HOH . K 4 HOH B 41 441 174 HOH HOH . K 4 HOH B 42 442 186 HOH HOH . K 4 HOH B 43 443 190 HOH HOH . K 4 HOH B 44 444 192 HOH HOH . K 4 HOH B 45 445 200 HOH HOH . K 4 HOH B 46 446 203 HOH HOH . K 4 HOH B 47 447 220 HOH HOH . K 4 HOH B 48 448 223 HOH HOH . K 4 HOH B 49 449 247 HOH HOH . K 4 HOH B 50 450 255 HOH HOH . K 4 HOH B 51 451 265 HOH HOH . K 4 HOH B 52 452 313 HOH HOH . K 4 HOH B 53 453 314 HOH HOH . K 4 HOH B 54 454 316 HOH HOH . K 4 HOH B 55 455 318 HOH HOH . K 4 HOH B 56 456 319 HOH HOH . K 4 HOH B 57 457 323 HOH HOH . K 4 HOH B 58 458 324 HOH HOH . K 4 HOH B 59 459 326 HOH HOH . K 4 HOH B 60 460 333 HOH HOH . K 4 HOH B 61 461 344 HOH HOH . K 4 HOH B 62 462 347 HOH HOH . K 4 HOH B 63 463 355 HOH HOH . K 4 HOH B 64 464 361 HOH HOH . K 4 HOH B 65 465 363 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NA _atom_site.label_atom_id NA _atom_site.label_comp_id NA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id G _atom_site.label_entity_id 2 _atom_site.Cartn_x 16.635 _atom_site.Cartn_y 2.759 _atom_site.Cartn_z 71.899 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 13.33 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id NA _atom_site.auth_comp_id NA _atom_site.auth_seq_id 302 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 303 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 1 #