data_4LQP # _model_server_result.job_id 4WvTWp0RiJhYOEus-12bDQ _model_server_result.datetime_utc '2025-02-26 16:19:50' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4lqp # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":801}' # _entry.id 4LQP # _exptl.entry_id 4LQP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 506.196 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4LQP _cell.length_a 129.38 _cell.length_b 129.38 _cell.length_c 231.69 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4LQP _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C10 H17 N6 O12 P3' _chem_comp.formula_weight 506.196 _chem_comp.id ANP _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PG O1G ANP doub 13 n n PG O2G ANP sing 14 n n PG O3G ANP sing 15 n n PG N3B ANP sing 16 n n O2G HOG2 ANP sing 17 n n O3G HOG3 ANP sing 18 n n PB O1B ANP doub 19 n n PB O2B ANP sing 20 n n PB N3B ANP sing 21 n n PB O3A ANP sing 22 n n O2B HOB2 ANP sing 23 n n N3B HNB1 ANP sing 24 n n PA O1A ANP doub 25 n n PA O2A ANP sing 26 n n PA O3A ANP sing 27 n n PA O5' ANP sing 28 n n O2A HOA2 ANP sing 29 n n O5' C5' ANP sing 30 n n C5' C4' ANP sing 31 n n C5' "H5'1" ANP sing 32 n n C5' "H5'2" ANP sing 33 n n C4' O4' ANP sing 34 n n C4' C3' ANP sing 35 n n C4' H4' ANP sing 36 n n O4' C1' ANP sing 37 n n C3' O3' ANP sing 38 n n C3' C2' ANP sing 39 n n C3' H3' ANP sing 40 n n O3' HO3' ANP sing 41 n n C2' O2' ANP sing 42 n n C2' C1' ANP sing 43 n n C2' H2' ANP sing 44 n n O2' HO2' ANP sing 45 n n C1' N9 ANP sing 46 n n C1' H1' ANP sing 47 n n N9 C8 ANP sing 48 n y N9 C4 ANP sing 49 n y C8 N7 ANP doub 50 n y C8 H8 ANP sing 51 n n N7 C5 ANP sing 52 n y C5 C6 ANP sing 53 n y C5 C4 ANP doub 54 n y C6 N6 ANP sing 55 n n C6 N1 ANP doub 56 n y N6 HN61 ANP sing 57 n n N6 HN62 ANP sing 58 n n N1 C2 ANP sing 59 n y C2 N3 ANP doub 60 n y C2 H2 ANP sing 61 n n N3 C4 ANP sing 62 n y # _atom_sites.entry_id 4LQP _atom_sites.fract_transf_matrix[1][1] 0.007729 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007729 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004316 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # _pdbx_nonpoly_scheme.asym_id C _pdbx_nonpoly_scheme.entity_id 3 _pdbx_nonpoly_scheme.mon_id ANP _pdbx_nonpoly_scheme.pdb_strand_id A _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 801 _pdbx_nonpoly_scheme.auth_seq_num 1 _pdbx_nonpoly_scheme.pdb_mon_id ANP _pdbx_nonpoly_scheme.auth_mon_id ANP _pdbx_nonpoly_scheme.pdb_ins_code . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PG ANP . . . C 3 -8.327 41.836 -42.669 1 167.47 ? PG ANP 801 A 1 HETATM 2 O O1G ANP . . . C 3 -8.225 40.339 -42.478 1 158.31 ? O1G ANP 801 A 1 HETATM 3 O O2G ANP . . . C 3 -8.728 42.189 -44.146 1 163.31 ? O2G ANP 801 A 1 HETATM 4 O O3G ANP . . . C 3 -9.428 42.495 -41.687 1 191.82 ? O3G ANP 801 A 1 HETATM 5 P PB ANP . . . C 3 -6.994 44.266 -42.75 1 223.43 ? PB ANP 801 A 1 HETATM 6 O O1B ANP . . . C 3 -5.634 44.683 -42.023 1 222.69 ? O1B ANP 801 A 1 HETATM 7 O O2B ANP . . . C 3 -8.348 45.004 -42.387 1 160.73 ? O2B ANP 801 A 1 HETATM 8 N N3B ANP . . . C 3 -6.855 42.554 -42.41 1 204.24 ? N3B ANP 801 A 1 HETATM 9 P PA ANP . . . C 3 -5.552 43.227 -44.873 1 174.92 ? PA ANP 801 A 1 HETATM 10 O O1A ANP . . . C 3 -4.129 43.239 -44.269 1 153.5 ? O1A ANP 801 A 1 HETATM 11 O O2A ANP . . . C 3 -6.205 41.891 -44.685 1 157.11 ? O2A ANP 801 A 1 HETATM 12 O O3A ANP . . . C 3 -6.439 44.354 -44.235 1 195.73 ? O3A ANP 801 A 1 HETATM 13 O O5' ANP . . . C 3 -5.545 43.471 -46.425 1 179.1 ? O5' ANP 801 A 1 HETATM 14 C C5' ANP . . . C 3 -6.734 43.154 -47.124 1 192.41 ? C5' ANP 801 A 1 HETATM 15 C C4' ANP . . . C 3 -6.656 42.841 -48.547 1 186.97 ? C4' ANP 801 A 1 HETATM 16 O O4' ANP . . . C 3 -5.467 43.283 -49.084 1 172.49 ? O4' ANP 801 A 1 HETATM 17 C C3' ANP . . . C 3 -6.602 41.383 -48.738 1 170.06 ? C3' ANP 801 A 1 HETATM 18 O O3' ANP . . . C 3 -7.84 40.788 -48.589 1 177.5 ? O3' ANP 801 A 1 HETATM 19 C C2' ANP . . . C 3 -6.103 41.274 -50.054 1 143.11 ? C2' ANP 801 A 1 HETATM 20 O O2' ANP . . . C 3 -7.134 41.396 -50.966 1 138.62 ? O2' ANP 801 A 1 HETATM 21 C C1' ANP . . . C 3 -5.192 42.417 -50.18 1 153.84 ? C1' ANP 801 A 1 HETATM 22 N N9 ANP . . . C 3 -3.748 42.108 -50.276 1 147.48 ? N9 ANP 801 A 1 HETATM 23 C C8 ANP . . . C 3 -2.745 42.721 -49.619 1 159.14 ? C8 ANP 801 A 1 HETATM 24 N N7 ANP . . . C 3 -1.588 42.152 -49.979 1 179.05 ? N7 ANP 801 A 1 HETATM 25 C C5 ANP . . . C 3 -1.852 41.169 -50.873 1 169.16 ? C5 ANP 801 A 1 HETATM 26 C C6 ANP . . . C 3 -1.074 40.253 -51.585 1 155.48 ? C6 ANP 801 A 1 HETATM 27 N N6 ANP . . . C 3 0.356 40.243 -51.418 1 150.13 ? N6 ANP 801 A 1 HETATM 28 N N1 ANP . . . C 3 -1.655 39.38 -52.42 1 134.98 ? N1 ANP 801 A 1 HETATM 29 C C2 ANP . . . C 3 -2.98 39.379 -52.58 1 151.33 ? C2 ANP 801 A 1 HETATM 30 N N3 ANP . . . C 3 -3.763 40.24 -51.919 1 165.47 ? N3 ANP 801 A 1 HETATM 31 C C4 ANP . . . C 3 -3.228 41.138 -51.065 1 156.01 ? C4 ANP 801 A 1 # _model_server_stats.io_time_ms 0 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 272 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 31 #