data_4LQS # _model_server_result.job_id Z4jU2wf475T1kiLmXFYEZQ _model_server_result.datetime_utc '2024-10-20 01:32:37' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4lqs # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":801}' # _entry.id 4LQS # _exptl.entry_id 4LQS _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 506.196 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 117.6 _cell.angle_gamma 90 _cell.entry_id 4LQS _cell.length_a 138.43 _cell.length_b 79.98 _cell.length_c 117.58 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4LQS _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C10 H17 N6 O12 P3' _chem_comp.formula_weight 506.196 _chem_comp.id ANP _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PG O1G ANP doub 13 n n PG O2G ANP sing 14 n n PG O3G ANP sing 15 n n PG N3B ANP sing 16 n n O2G HOG2 ANP sing 17 n n O3G HOG3 ANP sing 18 n n PB O1B ANP doub 19 n n PB O2B ANP sing 20 n n PB N3B ANP sing 21 n n PB O3A ANP sing 22 n n O2B HOB2 ANP sing 23 n n N3B HNB1 ANP sing 24 n n PA O1A ANP doub 25 n n PA O2A ANP sing 26 n n PA O3A ANP sing 27 n n PA O5' ANP sing 28 n n O2A HOA2 ANP sing 29 n n O5' C5' ANP sing 30 n n C5' C4' ANP sing 31 n n C5' "H5'1" ANP sing 32 n n C5' "H5'2" ANP sing 33 n n C4' O4' ANP sing 34 n n C4' C3' ANP sing 35 n n C4' H4' ANP sing 36 n n O4' C1' ANP sing 37 n n C3' O3' ANP sing 38 n n C3' C2' ANP sing 39 n n C3' H3' ANP sing 40 n n O3' HO3' ANP sing 41 n n C2' O2' ANP sing 42 n n C2' C1' ANP sing 43 n n C2' H2' ANP sing 44 n n O2' HO2' ANP sing 45 n n C1' N9 ANP sing 46 n n C1' H1' ANP sing 47 n n N9 C8 ANP sing 48 n y N9 C4 ANP sing 49 n y C8 N7 ANP doub 50 n y C8 H8 ANP sing 51 n n N7 C5 ANP sing 52 n y C5 C6 ANP sing 53 n y C5 C4 ANP doub 54 n y C6 N6 ANP sing 55 n n C6 N1 ANP doub 56 n y N6 HN61 ANP sing 57 n n N6 HN62 ANP sing 58 n n N1 C2 ANP sing 59 n y C2 N3 ANP doub 60 n y C2 H2 ANP sing 61 n n N3 C4 ANP sing 62 n y # _atom_sites.entry_id 4LQS _atom_sites.fract_transf_matrix[1][1] 0.007224 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003777 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012503 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009597 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # _pdbx_nonpoly_scheme.asym_id C _pdbx_nonpoly_scheme.entity_id 3 _pdbx_nonpoly_scheme.mon_id ANP _pdbx_nonpoly_scheme.pdb_strand_id A _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 801 _pdbx_nonpoly_scheme.auth_seq_num 1 _pdbx_nonpoly_scheme.pdb_mon_id ANP _pdbx_nonpoly_scheme.auth_mon_id ANP _pdbx_nonpoly_scheme.pdb_ins_code . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PG ANP . . . C 3 -34.404 14.365 18.57 1 110.66 ? PG ANP 801 A 1 HETATM 2 O O1G ANP . . . C 3 -34.967 14.754 17.214 1 107.73 ? O1G ANP 801 A 1 HETATM 3 O O2G ANP . . . C 3 -35.294 14.916 19.751 1 81.2 ? O2G ANP 801 A 1 HETATM 4 O O3G ANP . . . C 3 -34.272 12.771 18.776 1 145.09 ? O3G ANP 801 A 1 HETATM 5 P PB ANP . . . C 3 -32.732 15.36 20.428 1 157.63 ? PB ANP 801 A 1 HETATM 6 O O1B ANP . . . C 3 -31.329 16.114 20.32 1 166.26 ? O1B ANP 801 A 1 HETATM 7 O O2B ANP . . . C 3 -32.926 14.171 21.453 1 93.52 ? O2B ANP 801 A 1 HETATM 8 N N3B ANP . . . C 3 -32.879 14.962 18.747 1 173.76 ? N3B ANP 801 A 1 HETATM 9 P PA ANP . . . C 3 -33.704 17.824 19.395 1 92.43 ? PA ANP 801 A 1 HETATM 10 O O1A ANP . . . C 3 -32.407 18.662 19.476 1 90.47 ? O1A ANP 801 A 1 HETATM 11 O O2A ANP . . . C 3 -33.942 17.34 17.987 1 88.55 ? O2A ANP 801 A 1 HETATM 12 O O3A ANP . . . C 3 -33.694 16.64 20.456 1 195.98 ? O3A ANP 801 A 1 HETATM 13 O O5' ANP . . . C 3 -34.971 18.695 19.707 1 85.04 ? O5' ANP 801 A 1 HETATM 14 C C5' ANP . . . C 3 -36.222 18.235 19.225 1 82.48 ? C5' ANP 801 A 1 HETATM 15 C C4' ANP . . . C 3 -37.283 19.229 19.058 1 79.9 ? C4' ANP 801 A 1 HETATM 16 O O4' ANP . . . C 3 -36.891 20.448 19.586 1 80.84 ? O4' ANP 801 A 1 HETATM 17 C C3' ANP . . . C 3 -37.494 19.503 17.624 1 76.5 ? C3' ANP 801 A 1 HETATM 18 O O3' ANP . . . C 3 -38.326 18.585 17.034 1 74.26 ? O3' ANP 801 A 1 HETATM 19 C C2' ANP . . . C 3 -38.076 20.788 17.641 1 78.44 ? C2' ANP 801 A 1 HETATM 20 O O2' ANP . . . C 3 -39.398 20.714 18.056 1 78.36 ? O2' ANP 801 A 1 HETATM 21 C C1' ANP . . . C 3 -37.253 21.469 18.648 1 77.95 ? C1' ANP 801 A 1 HETATM 22 N N9 ANP . . . C 3 -36.075 22.218 18.116 1 70.62 ? N9 ANP 801 A 1 HETATM 23 C C8 ANP . . . C 3 -34.825 21.736 17.973 1 68.82 ? C8 ANP 801 A 1 HETATM 24 N N7 ANP . . . C 3 -34.037 22.685 17.457 1 66.95 ? N7 ANP 801 A 1 HETATM 25 C C5 ANP . . . C 3 -34.78 23.789 17.258 1 65.44 ? C5 ANP 801 A 1 HETATM 26 C C6 ANP . . . C 3 -34.498 25.061 16.753 1 66.02 ? C6 ANP 801 A 1 HETATM 27 N N6 ANP . . . C 3 -33.153 25.372 16.324 1 65.54 ? N6 ANP 801 A 1 HETATM 28 N N1 ANP . . . C 3 -35.471 25.986 16.679 1 67.25 ? N1 ANP 801 A 1 HETATM 29 C C2 ANP . . . C 3 -36.707 25.674 17.087 1 68.83 ? C2 ANP 801 A 1 HETATM 30 N N3 ANP . . . C 3 -37.021 24.459 17.575 1 68.93 ? N3 ANP 801 A 1 HETATM 31 C C4 ANP . . . C 3 -36.078 23.5 17.673 1 67 ? C4 ANP 801 A 1 # _model_server_stats.io_time_ms 139 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 255 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 31 #