data_4LS0 # _model_server_result.job_id wux4AbFreNUxrvEqotQRkQ _model_server_result.datetime_utc '2025-02-28 13:16:14' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4ls0 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 4LS0 # _exptl.entry_id 4LS0 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 456.344 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FLAVIN MONONUCLEOTIDE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4LS0 _cell.length_a 90.53 _cell.length_b 90.53 _cell.length_c 123.28 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4LS0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C17 H21 N4 O9 P' _chem_comp.formula_weight 456.344 _chem_comp.id FMN _chem_comp.mon_nstd_flag . _chem_comp.name 'FLAVIN MONONUCLEOTIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'RIBOFLAVIN MONOPHOSPHATE' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 FMN sing 107 n n N1 C10 FMN doub 108 n n C2 O2 FMN doub 109 n n C2 N3 FMN sing 110 n n N3 C4 FMN sing 111 n n N3 HN3 FMN sing 112 n n C4 O4 FMN doub 113 n n C4 C4A FMN sing 114 n n C4A N5 FMN doub 115 n n C4A C10 FMN sing 116 n n N5 C5A FMN sing 117 n n C5A C6 FMN doub 118 n y C5A C9A FMN sing 119 n y C6 C7 FMN sing 120 n y C6 H6 FMN sing 121 n n C7 C7M FMN sing 122 n n C7 C8 FMN doub 123 n y C7M HM71 FMN sing 124 n n C7M HM72 FMN sing 125 n n C7M HM73 FMN sing 126 n n C8 C8M FMN sing 127 n n C8 C9 FMN sing 128 n y C8M HM81 FMN sing 129 n n C8M HM82 FMN sing 130 n n C8M HM83 FMN sing 131 n n C9 C9A FMN doub 132 n y C9 H9 FMN sing 133 n n C9A N10 FMN sing 134 n n N10 C10 FMN sing 135 n n N10 C1' FMN sing 136 n n C1' C2' FMN sing 137 n n C1' "H1'1" FMN sing 138 n n C1' "H1'2" FMN sing 139 n n C2' O2' FMN sing 140 n n C2' C3' FMN sing 141 n n C2' H2' FMN sing 142 n n O2' HO2' FMN sing 143 n n C3' O3' FMN sing 144 n n C3' C4' FMN sing 145 n n C3' H3' FMN sing 146 n n O3' HO3' FMN sing 147 n n C4' O4' FMN sing 148 n n C4' C5' FMN sing 149 n n C4' H4' FMN sing 150 n n O4' HO4' FMN sing 151 n n C5' O5' FMN sing 152 n n C5' "H5'1" FMN sing 153 n n C5' "H5'2" FMN sing 154 n n O5' P FMN sing 155 n n P O1P FMN doub 156 n n P O2P FMN sing 157 n n P O3P FMN sing 158 n n O2P HOP2 FMN sing 159 n n O3P HOP3 FMN sing 160 n n # _atom_sites.entry_id 4LS0 _atom_sites.fract_transf_matrix[1][1] 0.011046 _atom_sites.fract_transf_matrix[1][2] 0.006377 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012755 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008112 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FMN A 1 401 398 FMN FMN . C 3 ORO A 1 402 399 ORO ORO . D 4 SO4 A 1 403 1 SO4 SO4 . E 4 SO4 A 1 404 2 SO4 SO4 . F 4 SO4 A 1 405 3 SO4 SO4 . G 4 SO4 A 1 406 4 SO4 SO4 . H 4 SO4 A 1 407 5 SO4 SO4 . I 4 SO4 A 1 408 6 SO4 SO4 . J 4 SO4 A 1 409 7 SO4 SO4 . K 4 SO4 A 1 410 8 SO4 SO4 . L 4 SO4 A 1 411 9 SO4 SO4 . M 4 SO4 A 1 412 10 SO4 SO4 . N 5 B3B A 1 413 1 B3B B33 . O 6 HOH A 1 501 1 HOH HOH . O 6 HOH A 2 502 2 HOH HOH . O 6 HOH A 3 503 3 HOH HOH . O 6 HOH A 4 504 4 HOH HOH . O 6 HOH A 5 505 5 HOH HOH . O 6 HOH A 6 506 6 HOH HOH . O 6 HOH A 7 507 8 HOH HOH . O 6 HOH A 8 508 9 HOH HOH . O 6 HOH A 9 509 10 HOH HOH . O 6 HOH A 10 510 11 HOH HOH . O 6 HOH A 11 511 12 HOH HOH . O 6 HOH A 12 512 13 HOH HOH . O 6 HOH A 13 513 14 HOH HOH . O 6 HOH A 14 514 15 HOH HOH . O 6 HOH A 15 515 16 HOH HOH . O 6 HOH A 16 516 17 HOH HOH . O 6 HOH A 17 517 18 HOH HOH . O 6 HOH A 18 518 19 HOH HOH . O 6 HOH A 19 519 20 HOH HOH . O 6 HOH A 20 520 21 HOH HOH . O 6 HOH A 21 521 22 HOH HOH . O 6 HOH A 22 522 23 HOH HOH . O 6 HOH A 23 523 24 HOH HOH . O 6 HOH A 24 524 25 HOH HOH . O 6 HOH A 25 525 26 HOH HOH . O 6 HOH A 26 526 27 HOH HOH . O 6 HOH A 27 527 28 HOH HOH . O 6 HOH A 28 528 29 HOH HOH . O 6 HOH A 29 529 30 HOH HOH . O 6 HOH A 30 530 31 HOH HOH . O 6 HOH A 31 531 32 HOH HOH . O 6 HOH A 32 532 33 HOH HOH . O 6 HOH A 33 533 34 HOH HOH . O 6 HOH A 34 534 35 HOH HOH . O 6 HOH A 35 535 36 HOH HOH . O 6 HOH A 36 536 37 HOH HOH . O 6 HOH A 37 537 38 HOH HOH . O 6 HOH A 38 538 39 HOH HOH . O 6 HOH A 39 539 40 HOH HOH . O 6 HOH A 40 540 41 HOH HOH . O 6 HOH A 41 541 42 HOH HOH . O 6 HOH A 42 542 43 HOH HOH . O 6 HOH A 43 543 44 HOH HOH . O 6 HOH A 44 544 45 HOH HOH . O 6 HOH A 45 545 46 HOH HOH . O 6 HOH A 46 546 47 HOH HOH . O 6 HOH A 47 547 48 HOH HOH . O 6 HOH A 48 548 49 HOH HOH . O 6 HOH A 49 549 50 HOH HOH . O 6 HOH A 50 550 51 HOH HOH . O 6 HOH A 51 551 52 HOH HOH . O 6 HOH A 52 552 53 HOH HOH . O 6 HOH A 53 553 54 HOH HOH . O 6 HOH A 54 554 55 HOH HOH . O 6 HOH A 55 555 56 HOH HOH . O 6 HOH A 56 556 57 HOH HOH . O 6 HOH A 57 557 58 HOH HOH . O 6 HOH A 58 558 59 HOH HOH . O 6 HOH A 59 559 60 HOH HOH . O 6 HOH A 60 560 61 HOH HOH . O 6 HOH A 61 561 62 HOH HOH . O 6 HOH A 62 562 63 HOH HOH . O 6 HOH A 63 563 64 HOH HOH . O 6 HOH A 64 564 65 HOH HOH . O 6 HOH A 65 565 66 HOH HOH . O 6 HOH A 66 566 67 HOH HOH . O 6 HOH A 67 567 68 HOH HOH . O 6 HOH A 68 568 69 HOH HOH . O 6 HOH A 69 569 70 HOH HOH . O 6 HOH A 70 570 71 HOH HOH . O 6 HOH A 71 571 72 HOH HOH . O 6 HOH A 72 572 73 HOH HOH . O 6 HOH A 73 573 74 HOH HOH . O 6 HOH A 74 574 75 HOH HOH . O 6 HOH A 75 575 76 HOH HOH . O 6 HOH A 76 576 77 HOH HOH . O 6 HOH A 77 577 78 HOH HOH . O 6 HOH A 78 578 79 HOH HOH . O 6 HOH A 79 579 80 HOH HOH . O 6 HOH A 80 580 81 HOH HOH . O 6 HOH A 81 581 82 HOH HOH . O 6 HOH A 82 582 83 HOH HOH . O 6 HOH A 83 583 84 HOH HOH . O 6 HOH A 84 584 85 HOH HOH . O 6 HOH A 85 585 87 HOH HOH . O 6 HOH A 86 586 88 HOH HOH . O 6 HOH A 87 587 89 HOH HOH . O 6 HOH A 88 588 90 HOH HOH . O 6 HOH A 89 589 91 HOH HOH . O 6 HOH A 90 590 92 HOH HOH . O 6 HOH A 91 591 93 HOH HOH . O 6 HOH A 92 592 94 HOH HOH . O 6 HOH A 93 593 95 HOH HOH . O 6 HOH A 94 594 96 HOH HOH . O 6 HOH A 95 595 97 HOH HOH . O 6 HOH A 96 596 98 HOH HOH . O 6 HOH A 97 597 99 HOH HOH . O 6 HOH A 98 598 100 HOH HOH . O 6 HOH A 99 599 101 HOH HOH . O 6 HOH A 100 600 102 HOH HOH . O 6 HOH A 101 601 103 HOH HOH . O 6 HOH A 102 602 104 HOH HOH . O 6 HOH A 103 603 105 HOH HOH . O 6 HOH A 104 604 106 HOH HOH . O 6 HOH A 105 605 107 HOH HOH . O 6 HOH A 106 606 108 HOH HOH . O 6 HOH A 107 607 109 HOH HOH . O 6 HOH A 108 608 111 HOH HOH . O 6 HOH A 109 609 112 HOH HOH . O 6 HOH A 110 610 113 HOH HOH . O 6 HOH A 111 611 114 HOH HOH . O 6 HOH A 112 612 115 HOH HOH . O 6 HOH A 113 613 116 HOH HOH . O 6 HOH A 114 614 119 HOH HOH . O 6 HOH A 115 615 120 HOH HOH . O 6 HOH A 116 616 121 HOH HOH . O 6 HOH A 117 617 127 HOH HOH . O 6 HOH A 118 618 128 HOH HOH . O 6 HOH A 119 619 129 HOH HOH . O 6 HOH A 120 620 130 HOH HOH . O 6 HOH A 121 621 131 HOH HOH . O 6 HOH A 122 622 132 HOH HOH . O 6 HOH A 123 623 133 HOH HOH . O 6 HOH A 124 624 134 HOH HOH . O 6 HOH A 125 625 135 HOH HOH . O 6 HOH A 126 626 136 HOH HOH . O 6 HOH A 127 627 137 HOH HOH . O 6 HOH A 128 628 139 HOH HOH . O 6 HOH A 129 629 140 HOH HOH . O 6 HOH A 130 630 141 HOH HOH . O 6 HOH A 131 631 142 HOH HOH . O 6 HOH A 132 632 143 HOH HOH . O 6 HOH A 133 633 144 HOH HOH . O 6 HOH A 134 634 145 HOH HOH . O 6 HOH A 135 635 146 HOH HOH . O 6 HOH A 136 636 147 HOH HOH . O 6 HOH A 137 637 148 HOH HOH . O 6 HOH A 138 638 149 HOH HOH . O 6 HOH A 139 639 150 HOH HOH . O 6 HOH A 140 640 151 HOH HOH . O 6 HOH A 141 641 152 HOH HOH . O 6 HOH A 142 642 153 HOH HOH . O 6 HOH A 143 643 154 HOH HOH . O 6 HOH A 144 644 155 HOH HOH . O 6 HOH A 145 645 156 HOH HOH . O 6 HOH A 146 646 157 HOH HOH . O 6 HOH A 147 647 158 HOH HOH . O 6 HOH A 148 648 159 HOH HOH . O 6 HOH A 149 649 160 HOH HOH . O 6 HOH A 150 650 161 HOH HOH . O 6 HOH A 151 651 162 HOH HOH . O 6 HOH A 152 652 164 HOH HOH . O 6 HOH A 153 653 165 HOH HOH . O 6 HOH A 154 654 166 HOH HOH . O 6 HOH A 155 655 167 HOH HOH . O 6 HOH A 156 656 168 HOH HOH . O 6 HOH A 157 657 169 HOH HOH . O 6 HOH A 158 658 170 HOH HOH . O 6 HOH A 159 659 171 HOH HOH . O 6 HOH A 160 660 172 HOH HOH . O 6 HOH A 161 661 173 HOH HOH . O 6 HOH A 162 662 174 HOH HOH . O 6 HOH A 163 663 175 HOH HOH . O 6 HOH A 164 664 176 HOH HOH . O 6 HOH A 165 665 177 HOH HOH . O 6 HOH A 166 666 178 HOH HOH . O 6 HOH A 167 667 179 HOH HOH . O 6 HOH A 168 668 180 HOH HOH . O 6 HOH A 169 669 181 HOH HOH . O 6 HOH A 170 670 182 HOH HOH . O 6 HOH A 171 671 183 HOH HOH . O 6 HOH A 172 672 184 HOH HOH . O 6 HOH A 173 673 185 HOH HOH . O 6 HOH A 174 674 186 HOH HOH . O 6 HOH A 175 675 187 HOH HOH . O 6 HOH A 176 676 188 HOH HOH . O 6 HOH A 177 677 189 HOH HOH . O 6 HOH A 178 678 190 HOH HOH . O 6 HOH A 179 679 191 HOH HOH . O 6 HOH A 180 680 192 HOH HOH . O 6 HOH A 181 681 193 HOH HOH . O 6 HOH A 182 682 194 HOH HOH . O 6 HOH A 183 683 195 HOH HOH . O 6 HOH A 184 684 196 HOH HOH . O 6 HOH A 185 685 197 HOH HOH . O 6 HOH A 186 686 198 HOH HOH . O 6 HOH A 187 687 199 HOH HOH . O 6 HOH A 188 688 200 HOH HOH . O 6 HOH A 189 689 201 HOH HOH . O 6 HOH A 190 690 202 HOH HOH . O 6 HOH A 191 691 203 HOH HOH . O 6 HOH A 192 692 204 HOH HOH . O 6 HOH A 193 693 205 HOH HOH . O 6 HOH A 194 694 206 HOH HOH . O 6 HOH A 195 695 207 HOH HOH . O 6 HOH A 196 696 208 HOH HOH . O 6 HOH A 197 697 211 HOH HOH . O 6 HOH A 198 698 212 HOH HOH . O 6 HOH A 199 699 213 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 FMN . . . B 2 -34.874 -24.096 -8.7 1 9.28 ? N1 FMN 401 A 1 HETATM 2 C C2 FMN . . . B 2 -35.669 -24.082 -9.833 1 11.68 ? C2 FMN 401 A 1 HETATM 3 O O2 FMN . . . B 2 -35.245 -24.545 -10.903 1 13.25 ? O2 FMN 401 A 1 HETATM 4 N N3 FMN . . . B 2 -36.94 -23.548 -9.779 1 9.66 ? N3 FMN 401 A 1 HETATM 5 C C4 FMN . . . B 2 -37.439 -23.024 -8.609 1 13.62 ? C4 FMN 401 A 1 HETATM 6 O O4 FMN . . . B 2 -38.58 -22.551 -8.579 1 12.38 ? O4 FMN 401 A 1 HETATM 7 C C4A FMN . . . B 2 -36.65 -23.038 -7.464 1 9.45 ? C4A FMN 401 A 1 HETATM 8 N N5 FMN . . . B 2 -37.143 -22.537 -6.274 1 6.15 ? N5 FMN 401 A 1 HETATM 9 C C5A FMN . . . B 2 -36.337 -22.526 -5.145 1 8.36 ? C5A FMN 401 A 1 HETATM 10 C C6 FMN . . . B 2 -36.809 -21.987 -3.948 1 9.02 ? C6 FMN 401 A 1 HETATM 11 C C7 FMN . . . B 2 -35.986 -21.994 -2.818 1 9.2 ? C7 FMN 401 A 1 HETATM 12 C C7M FMN . . . B 2 -36.487 -21.415 -1.523 1 11.57 ? C7M FMN 401 A 1 HETATM 13 C C8 FMN . . . B 2 -34.693 -22.519 -2.886 1 10.01 ? C8 FMN 401 A 1 HETATM 14 C C8M FMN . . . B 2 -33.798 -22.529 -1.678 1 11.91 ? C8M FMN 401 A 1 HETATM 15 C C9 FMN . . . B 2 -34.222 -23.05 -4.077 1 9.63 ? C9 FMN 401 A 1 HETATM 16 C C9A FMN . . . B 2 -35.041 -23.048 -5.211 1 9.88 ? C9A FMN 401 A 1 HETATM 17 N N10 FMN . . . B 2 -34.556 -23.573 -6.399 1 11.62 ? N10 FMN 401 A 1 HETATM 18 C C10 FMN . . . B 2 -35.362 -23.574 -7.521 1 10.1 ? C10 FMN 401 A 1 HETATM 19 C C1' FMN . . . B 2 -33.177 -24.17 -6.471 1 7.74 ? C1' FMN 401 A 1 HETATM 20 C C2' FMN . . . B 2 -32.059 -23.178 -6.727 1 6.88 ? C2' FMN 401 A 1 HETATM 21 O O2' FMN . . . B 2 -32.275 -22.633 -8.011 1 8.59 ? O2' FMN 401 A 1 HETATM 22 C C3' FMN . . . B 2 -30.725 -23.914 -6.679 1 10.97 ? C3' FMN 401 A 1 HETATM 23 O O3' FMN . . . B 2 -30.724 -24.895 -7.713 1 8.2 ? O3' FMN 401 A 1 HETATM 24 C C4' FMN . . . B 2 -30.497 -24.598 -5.327 1 8.71 ? C4' FMN 401 A 1 HETATM 25 O O4' FMN . . . B 2 -31.031 -23.824 -4.261 1 8.9 ? O4' FMN 401 A 1 HETATM 26 C C5' FMN . . . B 2 -29.005 -24.828 -5.066 1 8.75 ? C5' FMN 401 A 1 HETATM 27 O O5' FMN . . . B 2 -28.328 -23.584 -5.076 1 6.91 ? O5' FMN 401 A 1 HETATM 28 P P FMN . . . B 2 -27.961 -22.835 -3.689 1 9.95 ? P FMN 401 A 1 HETATM 29 O O1P FMN . . . B 2 -27.315 -23.834 -2.754 1 8.5 ? O1P FMN 401 A 1 HETATM 30 O O2P FMN . . . B 2 -29.221 -22.285 -3.037 1 10.19 ? O2P FMN 401 A 1 HETATM 31 O O3P FMN . . . B 2 -26.974 -21.719 -3.975 1 9.09 ? O3P FMN 401 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 308 _model_server_stats.encode_time_ms 12 _model_server_stats.element_count 31 #