data_4LTA
#
_model_server_result.job_id            XArfK_7fTMAbhkVH-XgJbg 
_model_server_result.datetime_utc      '2024-11-27 18:13:21' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4lta 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":202}' 
#
_entry.id    4LTA 
#
_exptl.entry_id    4LTA 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              246.109 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '5-PHOSPHOARABINONIC ACID' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4LTA 
_cell.length_a            72.95 
_cell.length_b            74.47 
_cell.length_c            75.9 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4LTA 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 D N N 
? 3 H N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A NE2 HIS 88 A HIS 88 1_555 C MN MN . A MN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.504 ? 
metalc ? metalc2 A NE2 HIS 90 A HIS 90 1_555 C MN MN . A MN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.22 ? 
metalc ? metalc3 A OE1 GLU 97 A GLU 97 1_555 C MN MN . A MN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.235 ? 
metalc ? metalc4 A NE2 HIS 136 A HIS 136 1_555 C MN MN . A MN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.4 ? 
metalc ? metalc5 C MN MN . A MN 201 1_555 D O1A PA5 . A PA5 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.208 ? 
metalc ? metalc6 C MN MN . A MN 201 1_555 K O HOH . A HOH 357 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.739 ? 
metalc ? metalc7 B NE2 HIS 88 B HIS 88 1_555 G MN MN . B MN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.334 ? 
metalc ? metalc8 B NE2 HIS 90 B HIS 90 1_555 G MN MN . B MN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.198 ? 
metalc ? metalc9 B OE1 GLU 97 B GLU 97 1_555 G MN MN . B MN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.268 ? 
metalc ? metalc10 B NE2 HIS 136 B HIS 136 1_555 G MN MN . B MN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.331 ? 
metalc ? metalc11 G MN MN . B MN 201 1_555 H O1 PA5 . B PA5 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.259 ? 
metalc ? metalc12 G MN MN . B MN 201 1_555 L O HOH . B HOH 380 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.265 ? 
#
_chem_comp.formula           'C5 H11 O9 P' 
_chem_comp.formula_weight    246.109 
_chem_comp.id                PA5 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '5-PHOSPHOARABINONIC ACID' 
_chem_comp.type              saccharide 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O1A C1 PA5 doub 233 n n 
C1 O1 PA5 sing 234 n n 
C1 C2 PA5 sing 235 n n 
O1 HO1 PA5 sing 236 n n 
C2 O2 PA5 sing 237 n n 
C2 C3 PA5 sing 238 n n 
C2 HC2 PA5 sing 239 n n 
O2 HO2 PA5 sing 240 n n 
C3 O3 PA5 sing 241 n n 
C3 C4 PA5 sing 242 n n 
C3 HC3 PA5 sing 243 n n 
O3 HO3 PA5 sing 244 n n 
C4 O4 PA5 sing 245 n n 
C4 C5 PA5 sing 246 n n 
C4 HC4 PA5 sing 247 n n 
O4 HO4 PA5 sing 248 n n 
C5 O5 PA5 sing 249 n n 
C5 H51 PA5 sing 250 n n 
C5 H52 PA5 sing 251 n n 
O5 P PA5 sing 252 n n 
P O1P PA5 doub 253 n n 
P O2P PA5 sing 254 n n 
P O3P PA5 sing 255 n n 
O2P HOP2 PA5 sing 256 n n 
O3P HOP3 PA5 sing 257 n n 
#
_atom_sites.entry_id                     4LTA 
_atom_sites.fract_transf_matrix[1][1]    0.013708 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.013428 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.013175 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 MN A 1 201 1 MN MN . 
D 3 PA5 A 1 202 1 PA5 PA5 . 
E 4 EDO A 1 203 1 EDO EDO . 
F 4 EDO A 1 204 3 EDO EDO . 
G 2 MN B 1 201 2 MN MN . 
H 3 PA5 B 1 202 2 PA5 PA5 . 
I 4 EDO B 1 203 2 EDO EDO . 
J 4 EDO B 1 204 4 EDO EDO . 
K 5 HOH A 1 301 1 HOH HOH . 
K 5 HOH A 2 302 3 HOH HOH . 
K 5 HOH A 3 303 7 HOH HOH . 
K 5 HOH A 4 304 8 HOH HOH . 
K 5 HOH A 5 305 11 HOH HOH . 
K 5 HOH A 6 306 13 HOH HOH . 
K 5 HOH A 7 307 14 HOH HOH . 
K 5 HOH A 8 308 16 HOH HOH . 
K 5 HOH A 9 309 17 HOH HOH . 
K 5 HOH A 10 310 18 HOH HOH . 
K 5 HOH A 11 311 19 HOH HOH . 
K 5 HOH A 12 312 20 HOH HOH . 
K 5 HOH A 13 313 23 HOH HOH . 
K 5 HOH A 14 314 24 HOH HOH . 
K 5 HOH A 15 315 25 HOH HOH . 
K 5 HOH A 16 316 27 HOH HOH . 
K 5 HOH A 17 317 31 HOH HOH . 
K 5 HOH A 18 318 38 HOH HOH . 
K 5 HOH A 19 319 39 HOH HOH . 
K 5 HOH A 20 320 41 HOH HOH . 
K 5 HOH A 21 321 44 HOH HOH . 
K 5 HOH A 22 322 45 HOH HOH . 
K 5 HOH A 23 323 49 HOH HOH . 
K 5 HOH A 24 324 52 HOH HOH . 
K 5 HOH A 25 325 54 HOH HOH . 
K 5 HOH A 26 326 55 HOH HOH . 
K 5 HOH A 27 327 56 HOH HOH . 
K 5 HOH A 28 328 60 HOH HOH . 
K 5 HOH A 29 329 62 HOH HOH . 
K 5 HOH A 30 330 65 HOH HOH . 
K 5 HOH A 31 331 67 HOH HOH . 
K 5 HOH A 32 332 73 HOH HOH . 
K 5 HOH A 33 333 74 HOH HOH . 
K 5 HOH A 34 334 75 HOH HOH . 
K 5 HOH A 35 335 81 HOH HOH . 
K 5 HOH A 36 336 83 HOH HOH . 
K 5 HOH A 37 337 84 HOH HOH . 
K 5 HOH A 38 338 85 HOH HOH . 
K 5 HOH A 39 339 86 HOH HOH . 
K 5 HOH A 40 340 87 HOH HOH . 
K 5 HOH A 41 341 88 HOH HOH . 
K 5 HOH A 42 342 92 HOH HOH . 
K 5 HOH A 43 343 93 HOH HOH . 
K 5 HOH A 44 344 96 HOH HOH . 
K 5 HOH A 45 345 102 HOH HOH . 
K 5 HOH A 46 346 105 HOH HOH . 
K 5 HOH A 47 347 112 HOH HOH . 
K 5 HOH A 48 348 113 HOH HOH . 
K 5 HOH A 49 349 118 HOH HOH . 
K 5 HOH A 50 350 121 HOH HOH . 
K 5 HOH A 51 351 200 HOH HOH . 
K 5 HOH A 52 352 201 HOH HOH . 
K 5 HOH A 53 353 203 HOH HOH . 
K 5 HOH A 54 354 206 HOH HOH . 
K 5 HOH A 55 355 207 HOH HOH . 
K 5 HOH A 56 356 208 HOH HOH . 
K 5 HOH A 57 357 127 HOH HOH . 
K 5 HOH A 58 358 129 HOH HOH . 
K 5 HOH A 59 359 125 HOH HOH . 
L 5 HOH B 1 301 2 HOH HOH . 
L 5 HOH B 2 302 4 HOH HOH . 
L 5 HOH B 3 303 5 HOH HOH . 
L 5 HOH B 4 304 6 HOH HOH . 
L 5 HOH B 5 305 9 HOH HOH . 
L 5 HOH B 6 306 10 HOH HOH . 
L 5 HOH B 7 307 12 HOH HOH . 
L 5 HOH B 8 308 15 HOH HOH . 
L 5 HOH B 9 309 21 HOH HOH . 
L 5 HOH B 10 310 22 HOH HOH . 
L 5 HOH B 11 311 26 HOH HOH . 
L 5 HOH B 12 312 28 HOH HOH . 
L 5 HOH B 13 313 29 HOH HOH . 
L 5 HOH B 14 314 30 HOH HOH . 
L 5 HOH B 15 315 32 HOH HOH . 
L 5 HOH B 16 316 33 HOH HOH . 
L 5 HOH B 17 317 34 HOH HOH . 
L 5 HOH B 18 318 35 HOH HOH . 
L 5 HOH B 19 319 36 HOH HOH . 
L 5 HOH B 20 320 37 HOH HOH . 
L 5 HOH B 21 321 40 HOH HOH . 
L 5 HOH B 22 322 42 HOH HOH . 
L 5 HOH B 23 323 43 HOH HOH . 
L 5 HOH B 24 324 46 HOH HOH . 
L 5 HOH B 25 325 47 HOH HOH . 
L 5 HOH B 26 326 48 HOH HOH . 
L 5 HOH B 27 327 50 HOH HOH . 
L 5 HOH B 28 328 51 HOH HOH . 
L 5 HOH B 29 329 53 HOH HOH . 
L 5 HOH B 30 330 57 HOH HOH . 
L 5 HOH B 31 331 58 HOH HOH . 
L 5 HOH B 32 332 59 HOH HOH . 
L 5 HOH B 33 333 61 HOH HOH . 
L 5 HOH B 34 334 63 HOH HOH . 
L 5 HOH B 35 335 64 HOH HOH . 
L 5 HOH B 36 336 66 HOH HOH . 
L 5 HOH B 37 337 68 HOH HOH . 
L 5 HOH B 38 338 69 HOH HOH . 
L 5 HOH B 39 339 70 HOH HOH . 
L 5 HOH B 40 340 71 HOH HOH . 
L 5 HOH B 41 341 72 HOH HOH . 
L 5 HOH B 42 342 76 HOH HOH . 
L 5 HOH B 43 343 77 HOH HOH . 
L 5 HOH B 44 344 78 HOH HOH . 
L 5 HOH B 45 345 79 HOH HOH . 
L 5 HOH B 46 346 80 HOH HOH . 
L 5 HOH B 47 347 82 HOH HOH . 
L 5 HOH B 48 348 89 HOH HOH . 
L 5 HOH B 49 349 90 HOH HOH . 
L 5 HOH B 50 350 91 HOH HOH . 
L 5 HOH B 51 351 94 HOH HOH . 
L 5 HOH B 52 352 95 HOH HOH . 
L 5 HOH B 53 353 97 HOH HOH . 
L 5 HOH B 54 354 98 HOH HOH . 
L 5 HOH B 55 355 99 HOH HOH . 
L 5 HOH B 56 356 100 HOH HOH . 
L 5 HOH B 57 357 101 HOH HOH . 
L 5 HOH B 58 358 103 HOH HOH . 
L 5 HOH B 59 359 104 HOH HOH . 
L 5 HOH B 60 360 106 HOH HOH . 
L 5 HOH B 61 361 107 HOH HOH . 
L 5 HOH B 62 362 108 HOH HOH . 
L 5 HOH B 63 363 109 HOH HOH . 
L 5 HOH B 64 364 110 HOH HOH . 
L 5 HOH B 65 365 111 HOH HOH . 
L 5 HOH B 66 366 114 HOH HOH . 
L 5 HOH B 67 367 115 HOH HOH . 
L 5 HOH B 68 368 116 HOH HOH . 
L 5 HOH B 69 369 117 HOH HOH . 
L 5 HOH B 70 370 119 HOH HOH . 
L 5 HOH B 71 371 120 HOH HOH . 
L 5 HOH B 72 372 122 HOH HOH . 
L 5 HOH B 73 373 123 HOH HOH . 
L 5 HOH B 74 374 124 HOH HOH . 
L 5 HOH B 75 375 198 HOH HOH . 
L 5 HOH B 76 376 199 HOH HOH . 
L 5 HOH B 77 377 202 HOH HOH . 
L 5 HOH B 78 378 204 HOH HOH . 
L 5 HOH B 79 379 205 HOH HOH . 
L 5 HOH B 80 380 126 HOH HOH . 
L 5 HOH B 81 381 128 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O O1A PA5 . . . H 3 -10.608 -37 7.513 1 58.32 ? O1A PA5 202 B 1 
HETATM 2 C C1 PA5 . . . H 3 -11.007 -37.989 6.857 1 32.39 ? C1 PA5 202 B 1 
HETATM 3 O O1 PA5 . . . H 3 -12.011 -38.685 7.194 1 25.94 ? O1 PA5 202 B 1 
HETATM 4 C C2 PA5 . . . H 3 -10.23 -38.313 5.605 1 26.65 ? C2 PA5 202 B 1 
HETATM 5 O O2 PA5 . . . H 3 -9.325 -37.224 5.31 1 24.16 ? O2 PA5 202 B 1 
HETATM 6 C C3 PA5 . . . H 3 -9.471 -39.649 5.737 1 38.79 ? C3 PA5 202 B 1 
HETATM 7 O O3 PA5 . . . H 3 -8.562 -39.603 6.842 1 34.19 ? O3 PA5 202 B 1 
HETATM 8 C C4 PA5 . . . H 3 -8.703 -40.008 4.45 1 17.31 ? C4 PA5 202 B 1 
HETATM 9 O O4 PA5 . . . H 3 -9.636 -40.04 3.347 1 17.69 ? O4 PA5 202 B 1 
HETATM 10 C C5 PA5 . . . H 3 -7.928 -41.318 4.566 1 30.3 ? C5 PA5 202 B 1 
HETATM 11 O O5 PA5 . . . H 3 -8.777 -42.357 5.057 1 26.62 ? O5 PA5 202 B 1 
HETATM 12 P P PA5 . . . H 3 -8.531 -43.122 6.466 1 28.89 ? P PA5 202 B 1 
HETATM 13 O O1P PA5 . . . H 3 -7.345 -43.98 6.176 1 24.68 ? O1P PA5 202 B 1 
HETATM 14 O O2P PA5 . . . H 3 -8.31 -42.061 7.518 1 21.99 ? O2P PA5 202 B 1 
HETATM 15 O O3P PA5 . . . H 3 -9.843 -43.811 6.633 1 22.37 ? O3P PA5 202 B 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           302 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           15 
#