data_4LUC # _model_server_result.job_id cs0p04pOQxJRlXD7BjIrdQ _model_server_result.datetime_utc '2024-11-22 10:03:44' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4luc # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":204}' # _entry.id 4LUC # _exptl.entry_id 4LUC _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 443.201 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "GUANOSINE-5'-DIPHOSPHATE" _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 77.86 _cell.angle_beta 81.54 _cell.angle_gamma 77.55 _cell.entry_id 4LUC _cell.length_a 32.822 _cell.length_b 39.083 _cell.length_c 62.457 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4LUC _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 F N N ? 4 J N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 13 A CYS 12 1_555 E S19 20G . A 20G 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? covale ? covale2 B SG CYS 13 B CYS 12 1_555 I S19 20G . B 20G 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.051 ? metalc ? metalc1 A OG SER 18 A SER 17 1_555 C CA CA . A CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.245 ? metalc ? metalc2 A O GLY 139 A GLY 138 1_555 D CA CA . A CA 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.292 ? metalc ? metalc3 C CA CA . A CA 201 1_555 F O1B GDP . A GDP 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 4.511 ? metalc ? metalc4 C CA CA . A CA 201 1_555 F O3B GDP . A GDP 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.199 ? metalc ? metalc5 C CA CA . A CA 201 1_555 K O HOH . A HOH 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.312 ? metalc ? metalc6 C CA CA . A CA 201 1_555 K O HOH . A HOH 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.206 ? metalc ? metalc7 C CA CA . A CA 201 1_555 K O HOH . A HOH 307 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.242 ? metalc ? metalc8 C CA CA . A CA 201 1_555 K O HOH . A HOH 308 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.231 ? metalc ? metalc9 D CA CA . A CA 202 1_555 K O HOH . A HOH 306 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.446 ? metalc ? metalc10 D CA CA . A CA 202 1_555 K O HOH . A HOH 318 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.356 ? metalc ? metalc11 D CA CA . A CA 202 1_555 K O HOH . A HOH 320 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.471 ? metalc ? metalc12 D CA CA . A CA 202 1_555 K O HOH . A HOH 346 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.317 ? metalc ? metalc13 B OG SER 18 B SER 17 1_555 G CA CA . B CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.266 ? metalc ? metalc14 B O GLY 139 B GLY 138 1_555 H CA CA . B CA 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.336 ? metalc ? metalc15 G CA CA . B CA 201 1_555 J O1B GDP . B GDP 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.211 ? metalc ? metalc16 G CA CA . B CA 201 1_555 L O HOH . B HOH 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.247 ? metalc ? metalc17 G CA CA . B CA 201 1_555 L O HOH . B HOH 306 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.246 ? metalc ? metalc18 G CA CA . B CA 201 1_555 L O HOH . B HOH 308 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.188 ? metalc ? metalc19 G CA CA . B CA 201 1_555 L O HOH . B HOH 309 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.288 ? metalc ? metalc20 H CA CA . B CA 202 1_555 L O HOH . B HOH 311 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.41 ? metalc ? metalc21 H CA CA . B CA 202 1_555 L O HOH . B HOH 312 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.356 ? metalc ? metalc22 H CA CA . B CA 202 1_555 L O HOH . B HOH 313 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.438 ? metalc ? metalc23 H CA CA . B CA 202 1_555 L O HOH . B HOH 394 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.352 ? # _chem_comp.formula 'C10 H15 N5 O11 P2' _chem_comp.formula_weight 443.201 _chem_comp.id GDP _chem_comp.mon_nstd_flag n _chem_comp.name "GUANOSINE-5'-DIPHOSPHATE" _chem_comp.type 'rna linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PB O1B GDP doub 131 n n PB O2B GDP sing 132 n n PB O3B GDP sing 133 n n PB O3A GDP sing 134 n n O2B HOB2 GDP sing 135 n n O3B HOB3 GDP sing 136 n n O3A PA GDP sing 137 n n PA O1A GDP doub 138 n n PA O2A GDP sing 139 n n PA O5' GDP sing 140 n n O2A HOA2 GDP sing 141 n n O5' C5' GDP sing 142 n n C5' C4' GDP sing 143 n n C5' H5' GDP sing 144 n n C5' "H5''" GDP sing 145 n n C4' O4' GDP sing 146 n n C4' C3' GDP sing 147 n n C4' H4' GDP sing 148 n n O4' C1' GDP sing 149 n n C3' O3' GDP sing 150 n n C3' C2' GDP sing 151 n n C3' H3' GDP sing 152 n n O3' HO3' GDP sing 153 n n C2' O2' GDP sing 154 n n C2' C1' GDP sing 155 n n C2' H2' GDP sing 156 n n O2' HO2' GDP sing 157 n n C1' N9 GDP sing 158 n n C1' H1' GDP sing 159 n n N9 C8 GDP sing 160 n y N9 C4 GDP sing 161 n y C8 N7 GDP doub 162 n y C8 H8 GDP sing 163 n n N7 C5 GDP sing 164 n y C5 C6 GDP sing 165 n n C5 C4 GDP doub 166 n y C6 O6 GDP doub 167 n n C6 N1 GDP sing 168 n n N1 C2 GDP sing 169 n n N1 HN1 GDP sing 170 n n C2 N2 GDP sing 171 n n C2 N3 GDP doub 172 n n N2 HN21 GDP sing 173 n n N2 HN22 GDP sing 174 n n N3 C4 GDP sing 175 n n # _atom_sites.entry_id 4LUC _atom_sites.fract_transf_matrix[1][1] 0.030467 _atom_sites.fract_transf_matrix[1][2] -0.006727 _atom_sites.fract_transf_matrix[1][3] -0.003346 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.026203 _atom_sites.fract_transf_matrix[2][3] -0.00493 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016471 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CA A 1 201 200 CA CA . D 2 CA A 1 202 205 CA CA . E 3 20G A 1 203 210 20G 189 . F 4 GDP A 1 204 220 GDP GDP . G 2 CA B 1 201 200 CA CA . H 2 CA B 1 202 205 CA CA . I 3 20G B 1 203 210 20G 189 . J 4 GDP B 1 204 220 GDP GDP . K 5 HOH A 1 301 2 HOH HOH . K 5 HOH A 2 302 3 HOH HOH . K 5 HOH A 3 303 5 HOH HOH . K 5 HOH A 4 304 7 HOH HOH . K 5 HOH A 5 305 9 HOH HOH . K 5 HOH A 6 306 10 HOH HOH . K 5 HOH A 7 307 11 HOH HOH . K 5 HOH A 8 308 12 HOH HOH . K 5 HOH A 9 309 16 HOH HOH . K 5 HOH A 10 310 19 HOH HOH . K 5 HOH A 11 311 20 HOH HOH . K 5 HOH A 12 312 25 HOH HOH . K 5 HOH A 13 313 26 HOH HOH . K 5 HOH A 14 314 27 HOH HOH . K 5 HOH A 15 315 29 HOH HOH . K 5 HOH A 16 316 30 HOH HOH . K 5 HOH A 17 317 32 HOH HOH . K 5 HOH A 18 318 33 HOH HOH . K 5 HOH A 19 319 34 HOH HOH . K 5 HOH A 20 320 39 HOH HOH . K 5 HOH A 21 321 41 HOH HOH . K 5 HOH A 22 322 42 HOH HOH . K 5 HOH A 23 323 43 HOH HOH . K 5 HOH A 24 324 45 HOH HOH . K 5 HOH A 25 325 46 HOH HOH . K 5 HOH A 26 326 48 HOH HOH . K 5 HOH A 27 327 49 HOH HOH . K 5 HOH A 28 328 53 HOH HOH . K 5 HOH A 29 329 55 HOH HOH . K 5 HOH A 30 330 58 HOH HOH . K 5 HOH A 31 331 60 HOH HOH . K 5 HOH A 32 332 61 HOH HOH . K 5 HOH A 33 333 65 HOH HOH . K 5 HOH A 34 334 66 HOH HOH . K 5 HOH A 35 335 68 HOH HOH . K 5 HOH A 36 336 70 HOH HOH . K 5 HOH A 37 337 71 HOH HOH . K 5 HOH A 38 338 72 HOH HOH . K 5 HOH A 39 339 74 HOH HOH . K 5 HOH A 40 340 75 HOH HOH . K 5 HOH A 41 341 77 HOH HOH . K 5 HOH A 42 342 81 HOH HOH . K 5 HOH A 43 343 83 HOH HOH . K 5 HOH A 44 344 84 HOH HOH . K 5 HOH A 45 345 87 HOH HOH . K 5 HOH A 46 346 88 HOH HOH . K 5 HOH A 47 347 89 HOH HOH . K 5 HOH A 48 348 92 HOH HOH . K 5 HOH A 49 349 93 HOH HOH . K 5 HOH A 50 350 94 HOH HOH . K 5 HOH A 51 351 96 HOH HOH . K 5 HOH A 52 352 97 HOH HOH . K 5 HOH A 53 353 98 HOH HOH . K 5 HOH A 54 354 100 HOH HOH . K 5 HOH A 55 355 102 HOH HOH . K 5 HOH A 56 356 104 HOH HOH . K 5 HOH A 57 357 108 HOH HOH . K 5 HOH A 58 358 109 HOH HOH . K 5 HOH A 59 359 110 HOH HOH . K 5 HOH A 60 360 111 HOH HOH . K 5 HOH A 61 361 116 HOH HOH . K 5 HOH A 62 362 123 HOH HOH . K 5 HOH A 63 363 125 HOH HOH . K 5 HOH A 64 364 127 HOH HOH . K 5 HOH A 65 365 129 HOH HOH . K 5 HOH A 66 366 130 HOH HOH . K 5 HOH A 67 367 132 HOH HOH . K 5 HOH A 68 368 135 HOH HOH . K 5 HOH A 69 369 139 HOH HOH . K 5 HOH A 70 370 141 HOH HOH . K 5 HOH A 71 371 143 HOH HOH . K 5 HOH A 72 372 144 HOH HOH . K 5 HOH A 73 373 145 HOH HOH . K 5 HOH A 74 374 147 HOH HOH . K 5 HOH A 75 375 151 HOH HOH . K 5 HOH A 76 376 155 HOH HOH . K 5 HOH A 77 377 157 HOH HOH . K 5 HOH A 78 378 159 HOH HOH . K 5 HOH A 79 379 162 HOH HOH . K 5 HOH A 80 380 163 HOH HOH . K 5 HOH A 81 381 164 HOH HOH . K 5 HOH A 82 382 167 HOH HOH . K 5 HOH A 83 383 168 HOH HOH . K 5 HOH A 84 384 169 HOH HOH . K 5 HOH A 85 385 170 HOH HOH . K 5 HOH A 86 386 171 HOH HOH . K 5 HOH A 87 387 172 HOH HOH . K 5 HOH A 88 388 173 HOH HOH . K 5 HOH A 89 389 174 HOH HOH . K 5 HOH A 90 390 175 HOH HOH . K 5 HOH A 91 391 176 HOH HOH . K 5 HOH A 92 392 179 HOH HOH . K 5 HOH A 93 393 181 HOH HOH . K 5 HOH A 94 394 183 HOH HOH . K 5 HOH A 95 395 185 HOH HOH . K 5 HOH A 96 396 186 HOH HOH . K 5 HOH A 97 397 190 HOH HOH . K 5 HOH A 98 398 194 HOH HOH . K 5 HOH A 99 399 195 HOH HOH . K 5 HOH A 100 400 199 HOH HOH . K 5 HOH A 101 401 200 HOH HOH . K 5 HOH A 102 402 202 HOH HOH . K 5 HOH A 103 403 203 HOH HOH . K 5 HOH A 104 404 207 HOH HOH . K 5 HOH A 105 405 211 HOH HOH . K 5 HOH A 106 406 213 HOH HOH . K 5 HOH A 107 407 214 HOH HOH . K 5 HOH A 108 408 217 HOH HOH . K 5 HOH A 109 409 218 HOH HOH . K 5 HOH A 110 410 220 HOH HOH . K 5 HOH A 111 411 227 HOH HOH . K 5 HOH A 112 412 228 HOH HOH . K 5 HOH A 113 413 234 HOH HOH . K 5 HOH A 114 414 238 HOH HOH . K 5 HOH A 115 415 240 HOH HOH . K 5 HOH A 116 416 241 HOH HOH . K 5 HOH A 117 417 242 HOH HOH . K 5 HOH A 118 418 243 HOH HOH . K 5 HOH A 119 419 244 HOH HOH . K 5 HOH A 120 420 248 HOH HOH . K 5 HOH A 121 421 249 HOH HOH . K 5 HOH A 122 422 251 HOH HOH . K 5 HOH A 123 423 255 HOH HOH . K 5 HOH A 124 424 257 HOH HOH . K 5 HOH A 125 425 259 HOH HOH . K 5 HOH A 126 426 262 HOH HOH . K 5 HOH A 127 427 264 HOH HOH . K 5 HOH A 128 428 266 HOH HOH . K 5 HOH A 129 429 270 HOH HOH . K 5 HOH A 130 430 272 HOH HOH . K 5 HOH A 131 431 273 HOH HOH . K 5 HOH A 132 432 274 HOH HOH . K 5 HOH A 133 433 277 HOH HOH . K 5 HOH A 134 434 279 HOH HOH . K 5 HOH A 135 435 281 HOH HOH . K 5 HOH A 136 436 282 HOH HOH . K 5 HOH A 137 437 283 HOH HOH . K 5 HOH A 138 438 284 HOH HOH . K 5 HOH A 139 439 285 HOH HOH . K 5 HOH A 140 440 287 HOH HOH . K 5 HOH A 141 441 292 HOH HOH . K 5 HOH A 142 442 293 HOH HOH . K 5 HOH A 143 443 294 HOH HOH . K 5 HOH A 144 444 295 HOH HOH . K 5 HOH A 145 445 300 HOH HOH . K 5 HOH A 146 446 302 HOH HOH . K 5 HOH A 147 447 307 HOH HOH . K 5 HOH A 148 448 308 HOH HOH . K 5 HOH A 149 449 309 HOH HOH . K 5 HOH A 150 450 311 HOH HOH . K 5 HOH A 151 451 312 HOH HOH . K 5 HOH A 152 452 313 HOH HOH . K 5 HOH A 153 453 315 HOH HOH . K 5 HOH A 154 454 319 HOH HOH . K 5 HOH A 155 455 321 HOH HOH . K 5 HOH A 156 456 322 HOH HOH . K 5 HOH A 157 457 324 HOH HOH . K 5 HOH A 158 458 326 HOH HOH . L 5 HOH B 1 301 1 HOH HOH . L 5 HOH B 2 302 4 HOH HOH . L 5 HOH B 3 303 6 HOH HOH . L 5 HOH B 4 304 8 HOH HOH . L 5 HOH B 5 305 13 HOH HOH . L 5 HOH B 6 306 14 HOH HOH . L 5 HOH B 7 307 15 HOH HOH . L 5 HOH B 8 308 17 HOH HOH . L 5 HOH B 9 309 18 HOH HOH . L 5 HOH B 10 310 21 HOH HOH . L 5 HOH B 11 311 22 HOH HOH . L 5 HOH B 12 312 23 HOH HOH . L 5 HOH B 13 313 24 HOH HOH . L 5 HOH B 14 314 28 HOH HOH . L 5 HOH B 15 315 31 HOH HOH . L 5 HOH B 16 316 35 HOH HOH . L 5 HOH B 17 317 36 HOH HOH . L 5 HOH B 18 318 37 HOH HOH . L 5 HOH B 19 319 38 HOH HOH . L 5 HOH B 20 320 40 HOH HOH . L 5 HOH B 21 321 44 HOH HOH . L 5 HOH B 22 322 47 HOH HOH . L 5 HOH B 23 323 50 HOH HOH . L 5 HOH B 24 324 51 HOH HOH . L 5 HOH B 25 325 52 HOH HOH . L 5 HOH B 26 326 54 HOH HOH . L 5 HOH B 27 327 56 HOH HOH . L 5 HOH B 28 328 57 HOH HOH . L 5 HOH B 29 329 59 HOH HOH . L 5 HOH B 30 330 62 HOH HOH . L 5 HOH B 31 331 63 HOH HOH . L 5 HOH B 32 332 64 HOH HOH . L 5 HOH B 33 333 67 HOH HOH . L 5 HOH B 34 334 69 HOH HOH . L 5 HOH B 35 335 73 HOH HOH . L 5 HOH B 36 336 76 HOH HOH . L 5 HOH B 37 337 78 HOH HOH . L 5 HOH B 38 338 79 HOH HOH . L 5 HOH B 39 339 80 HOH HOH . L 5 HOH B 40 340 82 HOH HOH . L 5 HOH B 41 341 85 HOH HOH . L 5 HOH B 42 342 86 HOH HOH . L 5 HOH B 43 343 90 HOH HOH . L 5 HOH B 44 344 91 HOH HOH . L 5 HOH B 45 345 95 HOH HOH . L 5 HOH B 46 346 99 HOH HOH . L 5 HOH B 47 347 101 HOH HOH . L 5 HOH B 48 348 103 HOH HOH . L 5 HOH B 49 349 105 HOH HOH . L 5 HOH B 50 350 106 HOH HOH . L 5 HOH B 51 351 107 HOH HOH . L 5 HOH B 52 352 112 HOH HOH . L 5 HOH B 53 353 113 HOH HOH . L 5 HOH B 54 354 114 HOH HOH . L 5 HOH B 55 355 115 HOH HOH . L 5 HOH B 56 356 117 HOH HOH . L 5 HOH B 57 357 118 HOH HOH . L 5 HOH B 58 358 119 HOH HOH . L 5 HOH B 59 359 120 HOH HOH . L 5 HOH B 60 360 121 HOH HOH . L 5 HOH B 61 361 122 HOH HOH . L 5 HOH B 62 362 124 HOH HOH . L 5 HOH B 63 363 126 HOH HOH . L 5 HOH B 64 364 128 HOH HOH . L 5 HOH B 65 365 131 HOH HOH . L 5 HOH B 66 366 133 HOH HOH . L 5 HOH B 67 367 134 HOH HOH . L 5 HOH B 68 368 136 HOH HOH . L 5 HOH B 69 369 137 HOH HOH . L 5 HOH B 70 370 138 HOH HOH . L 5 HOH B 71 371 140 HOH HOH . L 5 HOH B 72 372 142 HOH HOH . L 5 HOH B 73 373 146 HOH HOH . L 5 HOH B 74 374 148 HOH HOH . L 5 HOH B 75 375 149 HOH HOH . L 5 HOH B 76 376 150 HOH HOH . L 5 HOH B 77 377 152 HOH HOH . L 5 HOH B 78 378 153 HOH HOH . L 5 HOH B 79 379 154 HOH HOH . L 5 HOH B 80 380 156 HOH HOH . L 5 HOH B 81 381 158 HOH HOH . L 5 HOH B 82 382 160 HOH HOH . L 5 HOH B 83 383 161 HOH HOH . L 5 HOH B 84 384 165 HOH HOH . L 5 HOH B 85 385 166 HOH HOH . L 5 HOH B 86 386 177 HOH HOH . L 5 HOH B 87 387 178 HOH HOH . L 5 HOH B 88 388 180 HOH HOH . L 5 HOH B 89 389 182 HOH HOH . L 5 HOH B 90 390 184 HOH HOH . L 5 HOH B 91 391 187 HOH HOH . L 5 HOH B 92 392 188 HOH HOH . L 5 HOH B 93 393 189 HOH HOH . L 5 HOH B 94 394 191 HOH HOH . L 5 HOH B 95 395 192 HOH HOH . L 5 HOH B 96 396 193 HOH HOH . L 5 HOH B 97 397 196 HOH HOH . L 5 HOH B 98 398 197 HOH HOH . L 5 HOH B 99 399 198 HOH HOH . L 5 HOH B 100 400 201 HOH HOH . L 5 HOH B 101 401 204 HOH HOH . L 5 HOH B 102 402 205 HOH HOH . L 5 HOH B 103 403 206 HOH HOH . L 5 HOH B 104 404 208 HOH HOH . L 5 HOH B 105 405 209 HOH HOH . L 5 HOH B 106 406 210 HOH HOH . L 5 HOH B 107 407 212 HOH HOH . L 5 HOH B 108 408 215 HOH HOH . L 5 HOH B 109 409 216 HOH HOH . L 5 HOH B 110 410 219 HOH HOH . L 5 HOH B 111 411 221 HOH HOH . L 5 HOH B 112 412 222 HOH HOH . L 5 HOH B 113 413 223 HOH HOH . L 5 HOH B 114 414 224 HOH HOH . L 5 HOH B 115 415 225 HOH HOH . L 5 HOH B 116 416 226 HOH HOH . L 5 HOH B 117 417 229 HOH HOH . L 5 HOH B 118 418 230 HOH HOH . L 5 HOH B 119 419 231 HOH HOH . L 5 HOH B 120 420 232 HOH HOH . L 5 HOH B 121 421 233 HOH HOH . L 5 HOH B 122 422 235 HOH HOH . L 5 HOH B 123 423 236 HOH HOH . L 5 HOH B 124 424 237 HOH HOH . L 5 HOH B 125 425 239 HOH HOH . L 5 HOH B 126 426 245 HOH HOH . L 5 HOH B 127 427 246 HOH HOH . L 5 HOH B 128 428 247 HOH HOH . L 5 HOH B 129 429 250 HOH HOH . L 5 HOH B 130 430 252 HOH HOH . L 5 HOH B 131 431 253 HOH HOH . L 5 HOH B 132 432 254 HOH HOH . L 5 HOH B 133 433 256 HOH HOH . L 5 HOH B 134 434 258 HOH HOH . L 5 HOH B 135 435 260 HOH HOH . L 5 HOH B 136 436 261 HOH HOH . L 5 HOH B 137 437 263 HOH HOH . L 5 HOH B 138 438 265 HOH HOH . L 5 HOH B 139 439 267 HOH HOH . L 5 HOH B 140 440 268 HOH HOH . L 5 HOH B 141 441 269 HOH HOH . L 5 HOH B 142 442 271 HOH HOH . L 5 HOH B 143 443 275 HOH HOH . L 5 HOH B 144 444 276 HOH HOH . L 5 HOH B 145 445 278 HOH HOH . L 5 HOH B 146 446 280 HOH HOH . L 5 HOH B 147 447 286 HOH HOH . L 5 HOH B 148 448 288 HOH HOH . L 5 HOH B 149 449 289 HOH HOH . L 5 HOH B 150 450 290 HOH HOH . L 5 HOH B 151 451 291 HOH HOH . L 5 HOH B 152 452 296 HOH HOH . L 5 HOH B 153 453 297 HOH HOH . L 5 HOH B 154 454 298 HOH HOH . L 5 HOH B 155 455 299 HOH HOH . L 5 HOH B 156 456 301 HOH HOH . L 5 HOH B 157 457 303 HOH HOH . L 5 HOH B 158 458 304 HOH HOH . L 5 HOH B 159 459 305 HOH HOH . L 5 HOH B 160 460 306 HOH HOH . L 5 HOH B 161 461 310 HOH HOH . L 5 HOH B 162 462 314 HOH HOH . L 5 HOH B 163 463 316 HOH HOH . L 5 HOH B 164 464 317 HOH HOH . L 5 HOH B 165 465 318 HOH HOH . L 5 HOH B 166 466 320 HOH HOH . L 5 HOH B 167 467 323 HOH HOH . L 5 HOH B 168 468 325 HOH HOH . L 5 HOH B 169 469 327 HOH HOH . L 5 HOH B 170 470 328 HOH HOH . L 5 HOH B 171 471 329 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PB GDP . . . J 4 32.032 -0.629 -19.06 1 13.39 ? PB GDP 204 B 1 HETATM 2 O O1B GDP . . . J 4 32.071 0.76 -19.64 1 13.42 ? O1B GDP 204 B 1 HETATM 3 O O2B GDP . . . J 4 33.3 -1.002 -18.294 1 14.42 ? O2B GDP 204 B 1 HETATM 4 O O3B GDP . . . J 4 30.761 -0.936 -18.247 1 13.13 ? O3B GDP 204 B 1 HETATM 5 O O3A GDP . . . J 4 31.902 -1.68 -20.266 1 14.74 ? O3A GDP 204 B 1 HETATM 6 P PA GDP . . . J 4 31.867 -1.397 -21.885 1 13.82 ? PA GDP 204 B 1 HETATM 7 O O1A GDP . . . J 4 33.198 -0.936 -22.351 1 15.29 ? O1A GDP 204 B 1 HETATM 8 O O2A GDP . . . J 4 30.749 -0.532 -22.277 1 14.55 ? O2A GDP 204 B 1 HETATM 9 O O5' GDP . . . J 4 31.514 -2.817 -22.417 1 13.04 ? O5' GDP 204 B 1 HETATM 10 C C5' GDP . . . J 4 32.327 -3.923 -21.995 1 16.05 ? C5' GDP 204 B 1 HETATM 11 C C4' GDP . . . J 4 32.278 -5.048 -22.999 1 16.93 ? C4' GDP 204 B 1 HETATM 12 O O4' GDP . . . J 4 31.004 -5.691 -22.935 1 16.53 ? O4' GDP 204 B 1 HETATM 13 C C3' GDP . . . J 4 32.344 -4.492 -24.408 1 19.9 ? C3' GDP 204 B 1 HETATM 14 O O3' GDP . . . J 4 33.554 -4.534 -25.086 1 24.35 ? O3' GDP 204 B 1 HETATM 15 C C2' GDP . . . J 4 31.492 -5.444 -25.145 1 20.48 ? C2' GDP 204 B 1 HETATM 16 O O2' GDP . . . J 4 32.358 -6.555 -25.465 1 23.95 ? O2' GDP 204 B 1 HETATM 17 C C1' GDP . . . J 4 30.45 -5.884 -24.235 1 17.61 ? C1' GDP 204 B 1 HETATM 18 N N9 GDP . . . J 4 29.107 -5.32 -24.331 1 15.76 ? N9 GDP 204 B 1 HETATM 19 C C8 GDP . . . J 4 28.646 -4.148 -23.862 1 14.13 ? C8 GDP 204 B 1 HETATM 20 N N7 GDP . . . J 4 27.297 -4.091 -24.014 1 14.13 ? N7 GDP 204 B 1 HETATM 21 C C5 GDP . . . J 4 26.926 -5.248 -24.576 1 14.32 ? C5 GDP 204 B 1 HETATM 22 C C6 GDP . . . J 4 25.67 -5.822 -25.053 1 15.02 ? C6 GDP 204 B 1 HETATM 23 O O6 GDP . . . J 4 24.576 -5.276 -24.9 1 16.08 ? O6 GDP 204 B 1 HETATM 24 N N1 GDP . . . J 4 25.756 -7.058 -25.496 1 16.88 ? N1 GDP 204 B 1 HETATM 25 C C2 GDP . . . J 4 26.882 -7.776 -25.613 1 17.47 ? C2 GDP 204 B 1 HETATM 26 N N2 GDP . . . J 4 26.796 -8.979 -26.15 1 20.05 ? N2 GDP 204 B 1 HETATM 27 N N3 GDP . . . J 4 28.095 -7.332 -25.282 1 16.87 ? N3 GDP 204 B 1 HETATM 28 C C4 GDP . . . J 4 28.117 -6.072 -24.781 1 14.98 ? C4 GDP 204 B 1 HETATM 29 H H5' GDP . . . J 4 31.975 -4.284 -21.027 1 19.25 ? H5' GDP 204 B 1 HETATM 30 H "H5''" GDP . . . J 4 33.36 -3.589 -21.873 1 19.25 ? "H5''" GDP 204 B 1 HETATM 31 H H4' GDP . . . J 4 33.099 -5.758 -22.827 1 20.32 ? H4' GDP 204 B 1 HETATM 32 H H3' GDP . . . J 4 31.898 -3.488 -24.442 1 23.88 ? H3' GDP 204 B 1 HETATM 33 H HO3' GDP . . . J 4 33.434 -4.187 -25.98 1 29.22 ? HO3' GDP 204 B 1 HETATM 34 H H2' GDP . . . J 4 31.065 -4.977 -26.043 1 24.58 ? H2' GDP 204 B 1 HETATM 35 H HO2' GDP . . . J 4 33.086 -6.247 -26.022 1 28.74 ? HO2' GDP 204 B 1 HETATM 36 H H1' GDP . . . J 4 30.352 -6.967 -24.391 1 21.14 ? H1' GDP 204 B 1 HETATM 37 H H8 GDP . . . J 4 29.258 -3.363 -23.435 1 16.96 ? H8 GDP 204 B 1 HETATM 38 H HN1 GDP . . . J 4 24.876 -7.503 -25.826 1 20.26 ? HN1 GDP 204 B 1 HETATM 39 H HN21 GDP . . . J 4 27.627 -9.542 -26.261 1 24.06 ? HN21 GDP 204 B 1 HETATM 40 H HN22 GDP . . . J 4 25.898 -9.34 -26.439 1 24.06 ? HN22 GDP 204 B 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 266 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 40 #