data_4LUR
#
_model_server_result.job_id            P3hhtSH4sQcZUUvXjndOqg 
_model_server_result.datetime_utc      '2025-03-04 14:07:54' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4lur 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":402}' 
#
_entry.id    4LUR 
#
_exptl.entry_id    4LUR 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4LUR 
_cell.length_a            83.295 
_cell.length_b            97.771 
_cell.length_c            41.214 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4LUR 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        18 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 C N N 
? 3 D N N 
? 3 E N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C ASP 8 A ASP 8 1_555 A N MSE 9 A MSE 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? 
covale ? covale2 A C MSE 9 A MSE 9 1_555 A N ALA 10 A ALA 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
covale ? covale3 A C PHE 13 A PHE 13 1_555 A N MSE 14 A MSE 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.339 ? 
covale ? covale4 A C MSE 14 A MSE 14 1_555 A N ASP 15 A ASP 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? 
covale ? covale5 A C GLY 25 A GLY 25 1_555 A N MSE 26 A MSE 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
covale ? covale6 A C MSE 26 A MSE 26 1_555 A N GLU 27 A GLU 27 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
covale ? covale7 A C THR 46 A THR 46 1_555 A N MSE 47 A MSE 47 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? 
covale ? covale8 A C MSE 47 A MSE 47 1_555 A N LEU 48 A LEU 48 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? 
covale ? covale9 A C ALA 80 A ALA 80 1_555 A N MSE 81 A MSE 81 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? 
covale ? covale10 A C MSE 81 A MSE 81 1_555 A N PRO 82 A PRO 82 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.344 ? 
covale ? covale11 A C ALA 91 A ALA 91 1_555 A N MSE 92 A MSE 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? 
covale ? covale12 A C MSE 92 A MSE 92 1_555 A N ILE 93 A ILE 93 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? 
covale ? covale13 A C GLU 118 A GLU 118 1_555 A N MSE 119 A MSE 119 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? 
covale ? covale14 A C MSE 119 A MSE 119 1_555 A N ALA 120 A ALA 120 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? 
covale ? covale15 A C ALA 140 A ALA 140 1_555 A N MSE 141 A MSE 141 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? 
covale ? covale16 A C MSE 141 A MSE 141 1_555 A N ILE 142 A ILE 142 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? 
covale ? covale17 A C SER 188 A SER 188 1_555 A N MSE 189 A MSE 189 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? 
covale ? covale18 A C MSE 189 A MSE 189 1_555 A N PRO 190 A PRO 190 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? 
covale ? covale19 A C LYS 241 A LYS 241 1_555 A N MSE 242 A MSE 242 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? 
covale ? covale20 A C MSE 242 A MSE 242 1_555 A N SER 243 A SER 243 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? 
covale ? covale21 A C LYS 244 A LYS 244 1_555 A N MSE 245 A MSE 245 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? 
covale ? covale22 A C MSE 245 A MSE 245 1_555 A N LYS 246 A LYS 246 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 162 n n 
C1 C2 GOL sing 163 n n 
C1 H11 GOL sing 164 n n 
C1 H12 GOL sing 165 n n 
O1 HO1 GOL sing 166 n n 
C2 O2 GOL sing 167 n n 
C2 C3 GOL sing 168 n n 
C2 H2 GOL sing 169 n n 
O2 HO2 GOL sing 170 n n 
C3 O3 GOL sing 171 n n 
C3 H31 GOL sing 172 n n 
C3 H32 GOL sing 173 n n 
O3 HO3 GOL sing 174 n n 
#
_atom_sites.entry_id                     4LUR 
_atom_sites.fract_transf_matrix[1][1]    0.012006 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010228 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.024264 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 EPE A 1 401 401 EPE EPE . 
C 3 GOL A 1 402 402 GOL GOL . 
D 3 GOL A 1 403 403 GOL GOL . 
E 3 GOL A 1 404 404 GOL GOL . 
F 4 OLA A 1 405 400 OLA OLA . 
G 5 HOH A 1 501 1 HOH HOH . 
G 5 HOH A 2 502 2 HOH HOH . 
G 5 HOH A 3 503 3 HOH HOH . 
G 5 HOH A 4 504 4 HOH HOH . 
G 5 HOH A 5 505 5 HOH HOH . 
G 5 HOH A 6 506 7 HOH HOH . 
G 5 HOH A 7 507 8 HOH HOH . 
G 5 HOH A 8 508 9 HOH HOH . 
G 5 HOH A 9 509 10 HOH HOH . 
G 5 HOH A 10 510 11 HOH HOH . 
G 5 HOH A 11 511 12 HOH HOH . 
G 5 HOH A 12 512 13 HOH HOH . 
G 5 HOH A 13 513 14 HOH HOH . 
G 5 HOH A 14 514 15 HOH HOH . 
G 5 HOH A 15 515 16 HOH HOH . 
G 5 HOH A 16 516 17 HOH HOH . 
G 5 HOH A 17 517 18 HOH HOH . 
G 5 HOH A 18 518 19 HOH HOH . 
G 5 HOH A 19 519 20 HOH HOH . 
G 5 HOH A 20 520 21 HOH HOH . 
G 5 HOH A 21 521 23 HOH HOH . 
G 5 HOH A 22 522 24 HOH HOH . 
G 5 HOH A 23 523 25 HOH HOH . 
G 5 HOH A 24 524 26 HOH HOH . 
G 5 HOH A 25 525 27 HOH HOH . 
G 5 HOH A 26 526 28 HOH HOH . 
G 5 HOH A 27 527 29 HOH HOH . 
G 5 HOH A 28 528 31 HOH HOH . 
G 5 HOH A 29 529 32 HOH HOH . 
G 5 HOH A 30 530 33 HOH HOH . 
G 5 HOH A 31 531 34 HOH HOH . 
G 5 HOH A 32 532 38 HOH HOH . 
G 5 HOH A 33 533 39 HOH HOH . 
G 5 HOH A 34 534 40 HOH HOH . 
G 5 HOH A 35 535 41 HOH HOH . 
G 5 HOH A 36 536 42 HOH HOH . 
G 5 HOH A 37 537 44 HOH HOH . 
G 5 HOH A 38 538 45 HOH HOH . 
G 5 HOH A 39 539 46 HOH HOH . 
G 5 HOH A 40 540 47 HOH HOH . 
G 5 HOH A 41 541 48 HOH HOH . 
G 5 HOH A 42 542 49 HOH HOH . 
G 5 HOH A 43 543 52 HOH HOH . 
G 5 HOH A 44 544 53 HOH HOH . 
G 5 HOH A 45 545 54 HOH HOH . 
G 5 HOH A 46 546 55 HOH HOH . 
G 5 HOH A 47 547 56 HOH HOH . 
G 5 HOH A 48 548 57 HOH HOH . 
G 5 HOH A 49 549 58 HOH HOH . 
G 5 HOH A 50 550 59 HOH HOH . 
G 5 HOH A 51 551 61 HOH HOH . 
G 5 HOH A 52 552 62 HOH HOH . 
G 5 HOH A 53 553 63 HOH HOH . 
G 5 HOH A 54 554 64 HOH HOH . 
G 5 HOH A 55 555 65 HOH HOH . 
G 5 HOH A 56 556 66 HOH HOH . 
G 5 HOH A 57 557 67 HOH HOH . 
G 5 HOH A 58 558 68 HOH HOH . 
G 5 HOH A 59 559 69 HOH HOH . 
G 5 HOH A 60 560 70 HOH HOH . 
G 5 HOH A 61 561 71 HOH HOH . 
G 5 HOH A 62 562 72 HOH HOH . 
G 5 HOH A 63 563 73 HOH HOH . 
G 5 HOH A 64 564 74 HOH HOH . 
G 5 HOH A 65 565 75 HOH HOH . 
G 5 HOH A 66 566 76 HOH HOH . 
G 5 HOH A 67 567 77 HOH HOH . 
G 5 HOH A 68 568 78 HOH HOH . 
G 5 HOH A 69 569 79 HOH HOH . 
G 5 HOH A 70 570 80 HOH HOH . 
G 5 HOH A 71 571 81 HOH HOH . 
G 5 HOH A 72 572 82 HOH HOH . 
G 5 HOH A 73 573 84 HOH HOH . 
G 5 HOH A 74 574 85 HOH HOH . 
G 5 HOH A 75 575 86 HOH HOH . 
G 5 HOH A 76 576 87 HOH HOH . 
G 5 HOH A 77 577 88 HOH HOH . 
G 5 HOH A 78 578 89 HOH HOH . 
G 5 HOH A 79 579 90 HOH HOH . 
G 5 HOH A 80 580 91 HOH HOH . 
G 5 HOH A 81 581 92 HOH HOH . 
G 5 HOH A 82 582 94 HOH HOH . 
G 5 HOH A 83 583 95 HOH HOH . 
G 5 HOH A 84 584 96 HOH HOH . 
G 5 HOH A 85 585 97 HOH HOH . 
G 5 HOH A 86 586 98 HOH HOH . 
G 5 HOH A 87 587 99 HOH HOH . 
G 5 HOH A 88 588 100 HOH HOH . 
G 5 HOH A 89 589 101 HOH HOH . 
G 5 HOH A 90 590 102 HOH HOH . 
G 5 HOH A 91 591 103 HOH HOH . 
G 5 HOH A 92 592 104 HOH HOH . 
G 5 HOH A 93 593 105 HOH HOH . 
G 5 HOH A 94 594 106 HOH HOH . 
G 5 HOH A 95 595 107 HOH HOH . 
G 5 HOH A 96 596 108 HOH HOH . 
G 5 HOH A 97 597 109 HOH HOH . 
G 5 HOH A 98 598 110 HOH HOH . 
G 5 HOH A 99 599 111 HOH HOH . 
G 5 HOH A 100 600 113 HOH HOH . 
G 5 HOH A 101 601 114 HOH HOH . 
G 5 HOH A 102 602 115 HOH HOH . 
G 5 HOH A 103 603 116 HOH HOH . 
G 5 HOH A 104 604 117 HOH HOH . 
G 5 HOH A 105 605 118 HOH HOH . 
G 5 HOH A 106 606 119 HOH HOH . 
G 5 HOH A 107 607 120 HOH HOH . 
G 5 HOH A 108 608 121 HOH HOH . 
G 5 HOH A 109 609 122 HOH HOH . 
G 5 HOH A 110 610 123 HOH HOH . 
G 5 HOH A 111 611 125 HOH HOH . 
G 5 HOH A 112 612 126 HOH HOH . 
G 5 HOH A 113 613 127 HOH HOH . 
G 5 HOH A 114 614 131 HOH HOH . 
G 5 HOH A 115 615 132 HOH HOH . 
G 5 HOH A 116 616 133 HOH HOH . 
G 5 HOH A 117 617 134 HOH HOH . 
G 5 HOH A 118 618 136 HOH HOH . 
G 5 HOH A 119 619 137 HOH HOH . 
G 5 HOH A 120 620 138 HOH HOH . 
G 5 HOH A 121 621 139 HOH HOH . 
G 5 HOH A 122 622 140 HOH HOH . 
G 5 HOH A 123 623 141 HOH HOH . 
G 5 HOH A 124 624 142 HOH HOH . 
G 5 HOH A 125 625 143 HOH HOH . 
G 5 HOH A 126 626 144 HOH HOH . 
G 5 HOH A 127 627 145 HOH HOH . 
G 5 HOH A 128 628 146 HOH HOH . 
G 5 HOH A 129 629 147 HOH HOH . 
G 5 HOH A 130 630 148 HOH HOH . 
G 5 HOH A 131 631 149 HOH HOH . 
G 5 HOH A 132 632 151 HOH HOH . 
G 5 HOH A 133 633 152 HOH HOH . 
G 5 HOH A 134 634 154 HOH HOH . 
G 5 HOH A 135 635 155 HOH HOH . 
G 5 HOH A 136 636 156 HOH HOH . 
G 5 HOH A 137 637 157 HOH HOH . 
G 5 HOH A 138 638 158 HOH HOH . 
G 5 HOH A 139 639 159 HOH HOH . 
G 5 HOH A 140 640 161 HOH HOH . 
G 5 HOH A 141 641 163 HOH HOH . 
G 5 HOH A 142 642 164 HOH HOH . 
G 5 HOH A 143 643 165 HOH HOH . 
G 5 HOH A 144 644 166 HOH HOH . 
G 5 HOH A 145 645 169 HOH HOH . 
G 5 HOH A 146 646 170 HOH HOH . 
G 5 HOH A 147 647 172 HOH HOH . 
G 5 HOH A 148 648 173 HOH HOH . 
G 5 HOH A 149 649 174 HOH HOH . 
G 5 HOH A 150 650 175 HOH HOH . 
G 5 HOH A 151 651 176 HOH HOH . 
G 5 HOH A 152 652 177 HOH HOH . 
G 5 HOH A 153 653 178 HOH HOH . 
G 5 HOH A 154 654 181 HOH HOH . 
G 5 HOH A 155 655 182 HOH HOH . 
G 5 HOH A 156 656 183 HOH HOH . 
G 5 HOH A 157 657 184 HOH HOH . 
G 5 HOH A 158 658 185 HOH HOH . 
G 5 HOH A 159 659 186 HOH HOH . 
G 5 HOH A 160 660 187 HOH HOH . 
G 5 HOH A 161 661 188 HOH HOH . 
G 5 HOH A 162 662 191 HOH HOH . 
G 5 HOH A 163 663 192 HOH HOH . 
G 5 HOH A 164 664 193 HOH HOH . 
G 5 HOH A 165 665 194 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . C 3 -17.212 27.279 22.522 1 27.32 ? C1 GOL 402 A 1 
HETATM 2 O O1 GOL . . . C 3 -16.695 26.247 21.698 1 28.83 ? O1 GOL 402 A 1 
HETATM 3 C C2 GOL . . . C 3 -16.185 28.415 22.542 1 30.13 ? C2 GOL 402 A 1 
HETATM 4 O O2 GOL . . . C 3 -15.049 27.97 23.262 1 29.69 ? O2 GOL 402 A 1 
HETATM 5 C C3 GOL . . . C 3 -16.749 29.651 23.26 1 30.63 ? C3 GOL 402 A 1 
HETATM 6 O O3 GOL . . . C 3 -15.745 30.65 23.325 1 28.7 ? O3 GOL 402 A 1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           280 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           6 
#