data_4LV5 # _model_server_result.job_id h1V_js3Sb0_c2cWRdKYlMg _model_server_result.datetime_utc '2025-07-01 10:02:13' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4lv5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":501}' # _entry.id 4LV5 # _exptl.entry_id 4LV5 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 443.201 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "GUANOSINE-5'-DIPHOSPHATE" _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 99 _cell.angle_beta 106.6 _cell.angle_gamma 106.9 _cell.entry_id 4LV5 _cell.length_a 52.6 _cell.length_b 54.7 _cell.length_c 85.6 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4LV5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? dimeric 2 author_defined_assembly 1 PISA monomeric 1 software_defined_assembly 2 PISA monomeric 1 software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G,H,I,J,K,L,M 1 1 A,C,D,E,F,G,H,L 2 1 B,I,J,K,M 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 6 _struct_asym.id I _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 288 A CYS 458 1_555 A SG CYS 322 A CYS 492 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? disulf ? disulf2 B SG CYS 246 B CYS 236 1_555 B SG CYS 420 B CYS 410 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? covale ? covale1 A SG CYS 25 A CYS 195 1_555 D S2 BME . A BME 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.598 ? # _chem_comp.formula 'C10 H15 N5 O11 P2' _chem_comp.formula_weight 443.201 _chem_comp.id GDP _chem_comp.mon_nstd_flag n _chem_comp.name "GUANOSINE-5'-DIPHOSPHATE" _chem_comp.type 'rna linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PB O1B GDP doub 145 n n PB O2B GDP sing 146 n n PB O3B GDP sing 147 n n PB O3A GDP sing 148 n n O2B HOB2 GDP sing 149 n n O3B HOB3 GDP sing 150 n n O3A PA GDP sing 151 n n PA O1A GDP doub 152 n n PA O2A GDP sing 153 n n PA O5' GDP sing 154 n n O2A HOA2 GDP sing 155 n n O5' C5' GDP sing 156 n n C5' C4' GDP sing 157 n n C5' H5' GDP sing 158 n n C5' "H5''" GDP sing 159 n n C4' O4' GDP sing 160 n n C4' C3' GDP sing 161 n n C4' H4' GDP sing 162 n n O4' C1' GDP sing 163 n n C3' O3' GDP sing 164 n n C3' C2' GDP sing 165 n n C3' H3' GDP sing 166 n n O3' HO3' GDP sing 167 n n C2' O2' GDP sing 168 n n C2' C1' GDP sing 169 n n C2' H2' GDP sing 170 n n O2' HO2' GDP sing 171 n n C1' N9 GDP sing 172 n n C1' H1' GDP sing 173 n n N9 C8 GDP sing 174 n y N9 C4 GDP sing 175 n y C8 N7 GDP doub 176 n y C8 H8 GDP sing 177 n n N7 C5 GDP sing 178 n y C5 C6 GDP sing 179 n n C5 C4 GDP doub 180 n y C6 O6 GDP doub 181 n n C6 N1 GDP sing 182 n n N1 C2 GDP sing 183 n n N1 HN1 GDP sing 184 n n C2 N2 GDP sing 185 n n C2 N3 GDP doub 186 n n N2 HN21 GDP sing 187 n n N2 HN22 GDP sing 188 n n N3 C4 GDP sing 189 n n # _atom_sites.entry_id 4LV5 _atom_sites.fract_transf_matrix[1][1] 0.019011 _atom_sites.fract_transf_matrix[1][2] 0.005776 _atom_sites.fract_transf_matrix[1][3] 0.007434 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019107 _atom_sites.fract_transf_matrix[2][3] 0.00517 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012629 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 ADP A 1 601 1000 ADP ADP . D 4 BME A 1 602 600 BME BME . E 5 EDO A 1 603 900 EDO EDO . F 5 EDO A 1 604 901 EDO EDO . G 5 EDO A 1 605 902 EDO EDO . H 5 EDO A 1 606 903 EDO EDO . I 6 GDP B 1 501 500 GDP GDP . J 5 EDO B 1 502 904 EDO EDO . K 5 EDO B 1 503 905 EDO EDO . L 7 HOH A 1 701 1 HOH HOH . L 7 HOH A 2 702 5 HOH HOH . L 7 HOH A 3 703 6 HOH HOH . L 7 HOH A 4 704 7 HOH HOH . L 7 HOH A 5 705 8 HOH HOH . L 7 HOH A 6 706 9 HOH HOH . L 7 HOH A 7 707 10 HOH HOH . L 7 HOH A 8 708 12 HOH HOH . L 7 HOH A 9 709 13 HOH HOH . L 7 HOH A 10 710 14 HOH HOH . L 7 HOH A 11 711 15 HOH HOH . L 7 HOH A 12 712 16 HOH HOH . L 7 HOH A 13 713 17 HOH HOH . L 7 HOH A 14 714 18 HOH HOH . L 7 HOH A 15 715 20 HOH HOH . L 7 HOH A 16 716 21 HOH HOH . L 7 HOH A 17 717 23 HOH HOH . L 7 HOH A 18 718 24 HOH HOH . L 7 HOH A 19 719 26 HOH HOH . L 7 HOH A 20 720 28 HOH HOH . L 7 HOH A 21 721 29 HOH HOH . L 7 HOH A 22 722 31 HOH HOH . L 7 HOH A 23 723 32 HOH HOH . L 7 HOH A 24 724 33 HOH HOH . L 7 HOH A 25 725 35 HOH HOH . L 7 HOH A 26 726 37 HOH HOH . L 7 HOH A 27 727 38 HOH HOH . L 7 HOH A 28 728 39 HOH HOH . L 7 HOH A 29 729 40 HOH HOH . L 7 HOH A 30 730 41 HOH HOH . L 7 HOH A 31 731 43 HOH HOH . L 7 HOH A 32 732 45 HOH HOH . L 7 HOH A 33 733 46 HOH HOH . L 7 HOH A 34 734 47 HOH HOH . L 7 HOH A 35 735 48 HOH HOH . L 7 HOH A 36 736 50 HOH HOH . L 7 HOH A 37 737 53 HOH HOH . L 7 HOH A 38 738 54 HOH HOH . L 7 HOH A 39 739 57 HOH HOH . L 7 HOH A 40 740 58 HOH HOH . L 7 HOH A 41 741 60 HOH HOH . L 7 HOH A 42 742 63 HOH HOH . L 7 HOH A 43 743 67 HOH HOH . L 7 HOH A 44 744 68 HOH HOH . L 7 HOH A 45 745 69 HOH HOH . L 7 HOH A 46 746 70 HOH HOH . L 7 HOH A 47 747 71 HOH HOH . L 7 HOH A 48 748 75 HOH HOH . L 7 HOH A 49 749 78 HOH HOH . L 7 HOH A 50 750 80 HOH HOH . L 7 HOH A 51 751 82 HOH HOH . L 7 HOH A 52 752 83 HOH HOH . L 7 HOH A 53 753 84 HOH HOH . L 7 HOH A 54 754 85 HOH HOH . L 7 HOH A 55 755 86 HOH HOH . L 7 HOH A 56 756 89 HOH HOH . L 7 HOH A 57 757 90 HOH HOH . L 7 HOH A 58 758 91 HOH HOH . L 7 HOH A 59 759 92 HOH HOH . L 7 HOH A 60 760 95 HOH HOH . L 7 HOH A 61 761 96 HOH HOH . L 7 HOH A 62 762 99 HOH HOH . L 7 HOH A 63 763 100 HOH HOH . L 7 HOH A 64 764 102 HOH HOH . L 7 HOH A 65 765 103 HOH HOH . L 7 HOH A 66 766 105 HOH HOH . L 7 HOH A 67 767 106 HOH HOH . L 7 HOH A 68 768 107 HOH HOH . L 7 HOH A 69 769 108 HOH HOH . L 7 HOH A 70 770 109 HOH HOH . L 7 HOH A 71 771 110 HOH HOH . L 7 HOH A 72 772 111 HOH HOH . L 7 HOH A 73 773 112 HOH HOH . L 7 HOH A 74 774 113 HOH HOH . L 7 HOH A 75 775 114 HOH HOH . L 7 HOH A 76 776 115 HOH HOH . L 7 HOH A 77 777 117 HOH HOH . L 7 HOH A 78 778 119 HOH HOH . L 7 HOH A 79 779 120 HOH HOH . L 7 HOH A 80 780 124 HOH HOH . L 7 HOH A 81 781 130 HOH HOH . L 7 HOH A 82 782 132 HOH HOH . L 7 HOH A 83 783 133 HOH HOH . L 7 HOH A 84 784 134 HOH HOH . L 7 HOH A 85 785 135 HOH HOH . L 7 HOH A 86 786 138 HOH HOH . L 7 HOH A 87 787 139 HOH HOH . L 7 HOH A 88 788 142 HOH HOH . L 7 HOH A 89 789 144 HOH HOH . L 7 HOH A 90 790 145 HOH HOH . L 7 HOH A 91 791 146 HOH HOH . L 7 HOH A 92 792 148 HOH HOH . L 7 HOH A 93 793 152 HOH HOH . L 7 HOH A 94 794 153 HOH HOH . L 7 HOH A 95 795 154 HOH HOH . L 7 HOH A 96 796 155 HOH HOH . L 7 HOH A 97 797 159 HOH HOH . L 7 HOH A 98 798 160 HOH HOH . L 7 HOH A 99 799 161 HOH HOH . L 7 HOH A 100 800 162 HOH HOH . L 7 HOH A 101 801 163 HOH HOH . L 7 HOH A 102 802 165 HOH HOH . L 7 HOH A 103 803 166 HOH HOH . L 7 HOH A 104 804 171 HOH HOH . L 7 HOH A 105 805 174 HOH HOH . L 7 HOH A 106 806 176 HOH HOH . L 7 HOH A 107 807 177 HOH HOH . L 7 HOH A 108 808 179 HOH HOH . L 7 HOH A 109 809 181 HOH HOH . L 7 HOH A 110 810 183 HOH HOH . L 7 HOH A 111 811 184 HOH HOH . L 7 HOH A 112 812 193 HOH HOH . L 7 HOH A 113 813 195 HOH HOH . L 7 HOH A 114 814 199 HOH HOH . L 7 HOH A 115 815 213 HOH HOH . L 7 HOH A 116 816 217 HOH HOH . L 7 HOH A 117 817 220 HOH HOH . L 7 HOH A 118 818 221 HOH HOH . L 7 HOH A 119 819 224 HOH HOH . L 7 HOH A 120 820 225 HOH HOH . L 7 HOH A 121 821 227 HOH HOH . L 7 HOH A 122 822 229 HOH HOH . L 7 HOH A 123 823 230 HOH HOH . L 7 HOH A 124 824 233 HOH HOH . L 7 HOH A 125 825 234 HOH HOH . L 7 HOH A 126 826 235 HOH HOH . L 7 HOH A 127 827 238 HOH HOH . L 7 HOH A 128 828 243 HOH HOH . L 7 HOH A 129 829 252 HOH HOH . L 7 HOH A 130 830 257 HOH HOH . L 7 HOH A 131 831 259 HOH HOH . L 7 HOH A 132 832 260 HOH HOH . L 7 HOH A 133 833 261 HOH HOH . L 7 HOH A 134 834 264 HOH HOH . L 7 HOH A 135 835 265 HOH HOH . L 7 HOH A 136 836 266 HOH HOH . L 7 HOH A 137 837 270 HOH HOH . L 7 HOH A 138 838 271 HOH HOH . L 7 HOH A 139 839 273 HOH HOH . L 7 HOH A 140 840 274 HOH HOH . L 7 HOH A 141 841 276 HOH HOH . L 7 HOH A 142 842 277 HOH HOH . L 7 HOH A 143 843 280 HOH HOH . L 7 HOH A 144 844 281 HOH HOH . L 7 HOH A 145 845 284 HOH HOH . L 7 HOH A 146 846 286 HOH HOH . L 7 HOH A 147 847 287 HOH HOH . L 7 HOH A 148 848 289 HOH HOH . L 7 HOH A 149 849 290 HOH HOH . L 7 HOH A 150 850 293 HOH HOH . L 7 HOH A 151 851 297 HOH HOH . L 7 HOH A 152 852 300 HOH HOH . L 7 HOH A 153 853 301 HOH HOH . L 7 HOH A 154 854 302 HOH HOH . L 7 HOH A 155 855 305 HOH HOH . L 7 HOH A 156 856 307 HOH HOH . L 7 HOH A 157 857 308 HOH HOH . L 7 HOH A 158 858 310 HOH HOH . L 7 HOH A 159 859 311 HOH HOH . L 7 HOH A 160 860 319 HOH HOH . L 7 HOH A 161 861 321 HOH HOH . L 7 HOH A 162 862 324 HOH HOH . L 7 HOH A 163 863 325 HOH HOH . L 7 HOH A 164 864 326 HOH HOH . L 7 HOH A 165 865 331 HOH HOH . L 7 HOH A 166 866 333 HOH HOH . L 7 HOH A 167 867 334 HOH HOH . L 7 HOH A 168 868 335 HOH HOH . L 7 HOH A 169 869 337 HOH HOH . L 7 HOH A 170 870 339 HOH HOH . L 7 HOH A 171 871 344 HOH HOH . L 7 HOH A 172 872 345 HOH HOH . L 7 HOH A 173 873 351 HOH HOH . L 7 HOH A 174 874 353 HOH HOH . L 7 HOH A 175 875 355 HOH HOH . L 7 HOH A 176 876 356 HOH HOH . L 7 HOH A 177 877 357 HOH HOH . L 7 HOH A 178 878 362 HOH HOH . L 7 HOH A 179 879 366 HOH HOH . L 7 HOH A 180 880 370 HOH HOH . L 7 HOH A 181 881 375 HOH HOH . L 7 HOH A 182 882 378 HOH HOH . L 7 HOH A 183 883 382 HOH HOH . L 7 HOH A 184 884 383 HOH HOH . L 7 HOH A 185 885 384 HOH HOH . L 7 HOH A 186 886 385 HOH HOH . L 7 HOH A 187 887 386 HOH HOH . L 7 HOH A 188 888 388 HOH HOH . L 7 HOH A 189 889 389 HOH HOH . L 7 HOH A 190 890 390 HOH HOH . L 7 HOH A 191 891 392 HOH HOH . L 7 HOH A 192 892 395 HOH HOH . L 7 HOH A 193 893 396 HOH HOH . L 7 HOH A 194 894 398 HOH HOH . L 7 HOH A 195 895 400 HOH HOH . L 7 HOH A 196 896 403 HOH HOH . L 7 HOH A 197 897 404 HOH HOH . L 7 HOH A 198 898 406 HOH HOH . L 7 HOH A 199 899 407 HOH HOH . L 7 HOH A 200 900 410 HOH HOH . L 7 HOH A 201 901 411 HOH HOH . L 7 HOH A 202 902 412 HOH HOH . L 7 HOH A 203 903 413 HOH HOH . L 7 HOH A 204 904 418 HOH HOH . L 7 HOH A 205 905 420 HOH HOH . L 7 HOH A 206 906 422 HOH HOH . L 7 HOH A 207 907 423 HOH HOH . L 7 HOH A 208 908 425 HOH HOH . L 7 HOH A 209 909 428 HOH HOH . L 7 HOH A 210 910 429 HOH HOH . L 7 HOH A 211 911 430 HOH HOH . L 7 HOH A 212 912 432 HOH HOH . L 7 HOH A 213 913 434 HOH HOH . L 7 HOH A 214 914 437 HOH HOH . L 7 HOH A 215 915 442 HOH HOH . L 7 HOH A 216 916 444 HOH HOH . L 7 HOH A 217 917 446 HOH HOH . L 7 HOH A 218 918 447 HOH HOH . L 7 HOH A 219 919 449 HOH HOH . L 7 HOH A 220 920 452 HOH HOH . L 7 HOH A 221 921 457 HOH HOH . L 7 HOH A 222 922 459 HOH HOH . L 7 HOH A 223 923 460 HOH HOH . L 7 HOH A 224 924 465 HOH HOH . L 7 HOH A 225 925 466 HOH HOH . L 7 HOH A 226 926 471 HOH HOH . L 7 HOH A 227 927 472 HOH HOH . L 7 HOH A 228 928 475 HOH HOH . L 7 HOH A 229 929 476 HOH HOH . L 7 HOH A 230 930 477 HOH HOH . L 7 HOH A 231 931 478 HOH HOH . L 7 HOH A 232 932 482 HOH HOH . L 7 HOH A 233 933 483 HOH HOH . M 7 HOH B 1 601 2 HOH HOH . M 7 HOH B 2 602 3 HOH HOH . M 7 HOH B 3 603 4 HOH HOH . M 7 HOH B 4 604 11 HOH HOH . M 7 HOH B 5 605 19 HOH HOH . M 7 HOH B 6 606 22 HOH HOH . M 7 HOH B 7 607 25 HOH HOH . M 7 HOH B 8 608 27 HOH HOH . M 7 HOH B 9 609 30 HOH HOH . M 7 HOH B 10 610 34 HOH HOH . M 7 HOH B 11 611 36 HOH HOH . M 7 HOH B 12 612 42 HOH HOH . M 7 HOH B 13 613 44 HOH HOH . M 7 HOH B 14 614 49 HOH HOH . M 7 HOH B 15 615 51 HOH HOH . M 7 HOH B 16 616 52 HOH HOH . M 7 HOH B 17 617 55 HOH HOH . M 7 HOH B 18 618 56 HOH HOH . M 7 HOH B 19 619 59 HOH HOH . M 7 HOH B 20 620 61 HOH HOH . M 7 HOH B 21 621 62 HOH HOH . M 7 HOH B 22 622 64 HOH HOH . M 7 HOH B 23 623 65 HOH HOH . M 7 HOH B 24 624 66 HOH HOH . M 7 HOH B 25 625 72 HOH HOH . M 7 HOH B 26 626 73 HOH HOH . M 7 HOH B 27 627 74 HOH HOH . M 7 HOH B 28 628 76 HOH HOH . M 7 HOH B 29 629 77 HOH HOH . M 7 HOH B 30 630 79 HOH HOH . M 7 HOH B 31 631 81 HOH HOH . M 7 HOH B 32 632 87 HOH HOH . M 7 HOH B 33 633 88 HOH HOH . M 7 HOH B 34 634 93 HOH HOH . M 7 HOH B 35 635 94 HOH HOH . M 7 HOH B 36 636 97 HOH HOH . M 7 HOH B 37 637 98 HOH HOH . M 7 HOH B 38 638 101 HOH HOH . M 7 HOH B 39 639 104 HOH HOH . M 7 HOH B 40 640 116 HOH HOH . M 7 HOH B 41 641 118 HOH HOH . M 7 HOH B 42 642 121 HOH HOH . M 7 HOH B 43 643 122 HOH HOH . M 7 HOH B 44 644 123 HOH HOH . M 7 HOH B 45 645 125 HOH HOH . M 7 HOH B 46 646 126 HOH HOH . M 7 HOH B 47 647 127 HOH HOH . M 7 HOH B 48 648 128 HOH HOH . M 7 HOH B 49 649 129 HOH HOH . M 7 HOH B 50 650 131 HOH HOH . M 7 HOH B 51 651 136 HOH HOH . M 7 HOH B 52 652 137 HOH HOH . M 7 HOH B 53 653 140 HOH HOH . M 7 HOH B 54 654 141 HOH HOH . M 7 HOH B 55 655 143 HOH HOH . M 7 HOH B 56 656 147 HOH HOH . M 7 HOH B 57 657 149 HOH HOH . M 7 HOH B 58 658 150 HOH HOH . M 7 HOH B 59 659 151 HOH HOH . M 7 HOH B 60 660 156 HOH HOH . M 7 HOH B 61 661 157 HOH HOH . M 7 HOH B 62 662 158 HOH HOH . M 7 HOH B 63 663 164 HOH HOH . M 7 HOH B 64 664 167 HOH HOH . M 7 HOH B 65 665 168 HOH HOH . M 7 HOH B 66 666 169 HOH HOH . M 7 HOH B 67 667 170 HOH HOH . M 7 HOH B 68 668 172 HOH HOH . M 7 HOH B 69 669 173 HOH HOH . M 7 HOH B 70 670 175 HOH HOH . M 7 HOH B 71 671 178 HOH HOH . M 7 HOH B 72 672 180 HOH HOH . M 7 HOH B 73 673 182 HOH HOH . M 7 HOH B 74 674 185 HOH HOH . M 7 HOH B 75 675 186 HOH HOH . M 7 HOH B 76 676 187 HOH HOH . M 7 HOH B 77 677 188 HOH HOH . M 7 HOH B 78 678 189 HOH HOH . M 7 HOH B 79 679 190 HOH HOH . M 7 HOH B 80 680 191 HOH HOH . M 7 HOH B 81 681 192 HOH HOH . M 7 HOH B 82 682 194 HOH HOH . M 7 HOH B 83 683 196 HOH HOH . M 7 HOH B 84 684 197 HOH HOH . M 7 HOH B 85 685 198 HOH HOH . M 7 HOH B 86 686 200 HOH HOH . M 7 HOH B 87 687 201 HOH HOH . M 7 HOH B 88 688 202 HOH HOH . M 7 HOH B 89 689 203 HOH HOH . M 7 HOH B 90 690 204 HOH HOH . M 7 HOH B 91 691 205 HOH HOH . M 7 HOH B 92 692 206 HOH HOH . M 7 HOH B 93 693 207 HOH HOH . M 7 HOH B 94 694 208 HOH HOH . M 7 HOH B 95 695 209 HOH HOH . M 7 HOH B 96 696 210 HOH HOH . M 7 HOH B 97 697 211 HOH HOH . M 7 HOH B 98 698 212 HOH HOH . M 7 HOH B 99 699 214 HOH HOH . M 7 HOH B 100 700 215 HOH HOH . M 7 HOH B 101 701 216 HOH HOH . M 7 HOH B 102 702 218 HOH HOH . M 7 HOH B 103 703 219 HOH HOH . M 7 HOH B 104 704 222 HOH HOH . M 7 HOH B 105 705 223 HOH HOH . M 7 HOH B 106 706 226 HOH HOH . M 7 HOH B 107 707 228 HOH HOH . M 7 HOH B 108 708 231 HOH HOH . M 7 HOH B 109 709 232 HOH HOH . M 7 HOH B 110 710 236 HOH HOH . M 7 HOH B 111 711 237 HOH HOH . M 7 HOH B 112 712 239 HOH HOH . M 7 HOH B 113 713 240 HOH HOH . M 7 HOH B 114 714 241 HOH HOH . M 7 HOH B 115 715 242 HOH HOH . M 7 HOH B 116 716 244 HOH HOH . M 7 HOH B 117 717 245 HOH HOH . M 7 HOH B 118 718 246 HOH HOH . M 7 HOH B 119 719 247 HOH HOH . M 7 HOH B 120 720 248 HOH HOH . M 7 HOH B 121 721 249 HOH HOH . M 7 HOH B 122 722 250 HOH HOH . M 7 HOH B 123 723 251 HOH HOH . M 7 HOH B 124 724 253 HOH HOH . M 7 HOH B 125 725 254 HOH HOH . M 7 HOH B 126 726 255 HOH HOH . M 7 HOH B 127 727 256 HOH HOH . M 7 HOH B 128 728 258 HOH HOH . M 7 HOH B 129 729 262 HOH HOH . M 7 HOH B 130 730 263 HOH HOH . M 7 HOH B 131 731 267 HOH HOH . M 7 HOH B 132 732 268 HOH HOH . M 7 HOH B 133 733 269 HOH HOH . M 7 HOH B 134 734 272 HOH HOH . M 7 HOH B 135 735 275 HOH HOH . M 7 HOH B 136 736 278 HOH HOH . M 7 HOH B 137 737 279 HOH HOH . M 7 HOH B 138 738 282 HOH HOH . M 7 HOH B 139 739 283 HOH HOH . M 7 HOH B 140 740 285 HOH HOH . M 7 HOH B 141 741 288 HOH HOH . M 7 HOH B 142 742 291 HOH HOH . M 7 HOH B 143 743 292 HOH HOH . M 7 HOH B 144 744 294 HOH HOH . M 7 HOH B 145 745 295 HOH HOH . M 7 HOH B 146 746 296 HOH HOH . M 7 HOH B 147 747 298 HOH HOH . M 7 HOH B 148 748 299 HOH HOH . M 7 HOH B 149 749 303 HOH HOH . M 7 HOH B 150 750 304 HOH HOH . M 7 HOH B 151 751 306 HOH HOH . M 7 HOH B 152 752 309 HOH HOH . M 7 HOH B 153 753 312 HOH HOH . M 7 HOH B 154 754 313 HOH HOH . M 7 HOH B 155 755 314 HOH HOH . M 7 HOH B 156 756 315 HOH HOH . M 7 HOH B 157 757 316 HOH HOH . M 7 HOH B 158 758 317 HOH HOH . M 7 HOH B 159 759 318 HOH HOH . M 7 HOH B 160 760 320 HOH HOH . M 7 HOH B 161 761 322 HOH HOH . M 7 HOH B 162 762 323 HOH HOH . M 7 HOH B 163 763 327 HOH HOH . M 7 HOH B 164 764 328 HOH HOH . M 7 HOH B 165 765 329 HOH HOH . M 7 HOH B 166 766 330 HOH HOH . M 7 HOH B 167 767 332 HOH HOH . M 7 HOH B 168 768 336 HOH HOH . M 7 HOH B 169 769 338 HOH HOH . M 7 HOH B 170 770 340 HOH HOH . M 7 HOH B 171 771 341 HOH HOH . M 7 HOH B 172 772 342 HOH HOH . M 7 HOH B 173 773 343 HOH HOH . M 7 HOH B 174 774 346 HOH HOH . M 7 HOH B 175 775 347 HOH HOH . M 7 HOH B 176 776 348 HOH HOH . M 7 HOH B 177 777 349 HOH HOH . M 7 HOH B 178 778 350 HOH HOH . M 7 HOH B 179 779 352 HOH HOH . M 7 HOH B 180 780 354 HOH HOH . M 7 HOH B 181 781 358 HOH HOH . M 7 HOH B 182 782 359 HOH HOH . M 7 HOH B 183 783 360 HOH HOH . M 7 HOH B 184 784 361 HOH HOH . M 7 HOH B 185 785 363 HOH HOH . M 7 HOH B 186 786 364 HOH HOH . M 7 HOH B 187 787 365 HOH HOH . M 7 HOH B 188 788 367 HOH HOH . M 7 HOH B 189 789 368 HOH HOH . M 7 HOH B 190 790 369 HOH HOH . M 7 HOH B 191 791 371 HOH HOH . M 7 HOH B 192 792 372 HOH HOH . M 7 HOH B 193 793 373 HOH HOH . M 7 HOH B 194 794 374 HOH HOH . M 7 HOH B 195 795 376 HOH HOH . M 7 HOH B 196 796 377 HOH HOH . M 7 HOH B 197 797 379 HOH HOH . M 7 HOH B 198 798 380 HOH HOH . M 7 HOH B 199 799 381 HOH HOH . M 7 HOH B 200 800 387 HOH HOH . M 7 HOH B 201 801 391 HOH HOH . M 7 HOH B 202 802 393 HOH HOH . M 7 HOH B 203 803 394 HOH HOH . M 7 HOH B 204 804 397 HOH HOH . M 7 HOH B 205 805 399 HOH HOH . M 7 HOH B 206 806 401 HOH HOH . M 7 HOH B 207 807 402 HOH HOH . M 7 HOH B 208 808 405 HOH HOH . M 7 HOH B 209 809 408 HOH HOH . M 7 HOH B 210 810 409 HOH HOH . M 7 HOH B 211 811 414 HOH HOH . M 7 HOH B 212 812 415 HOH HOH . M 7 HOH B 213 813 416 HOH HOH . M 7 HOH B 214 814 417 HOH HOH . M 7 HOH B 215 815 419 HOH HOH . M 7 HOH B 216 816 421 HOH HOH . M 7 HOH B 217 817 424 HOH HOH . M 7 HOH B 218 818 426 HOH HOH . M 7 HOH B 219 819 427 HOH HOH . M 7 HOH B 220 820 431 HOH HOH . M 7 HOH B 221 821 433 HOH HOH . M 7 HOH B 222 822 435 HOH HOH . M 7 HOH B 223 823 436 HOH HOH . M 7 HOH B 224 824 438 HOH HOH . M 7 HOH B 225 825 439 HOH HOH . M 7 HOH B 226 826 440 HOH HOH . M 7 HOH B 227 827 441 HOH HOH . M 7 HOH B 228 828 443 HOH HOH . M 7 HOH B 229 829 445 HOH HOH . M 7 HOH B 230 830 448 HOH HOH . M 7 HOH B 231 831 450 HOH HOH . M 7 HOH B 232 832 451 HOH HOH . M 7 HOH B 233 833 453 HOH HOH . M 7 HOH B 234 834 454 HOH HOH . M 7 HOH B 235 835 455 HOH HOH . M 7 HOH B 236 836 456 HOH HOH . M 7 HOH B 237 837 458 HOH HOH . M 7 HOH B 238 838 461 HOH HOH . M 7 HOH B 239 839 462 HOH HOH . M 7 HOH B 240 840 463 HOH HOH . M 7 HOH B 241 841 464 HOH HOH . M 7 HOH B 242 842 467 HOH HOH . M 7 HOH B 243 843 468 HOH HOH . M 7 HOH B 244 844 469 HOH HOH . M 7 HOH B 245 845 470 HOH HOH . M 7 HOH B 246 846 473 HOH HOH . M 7 HOH B 247 847 474 HOH HOH . M 7 HOH B 248 848 479 HOH HOH . M 7 HOH B 249 849 480 HOH HOH . M 7 HOH B 250 850 481 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PB GDP . . . I 6 55.825 8.951 -99.11 1 32.81 ? PB GDP 501 B 1 HETATM 2 O O1B GDP . . . I 6 57.297 8.63 -99.31 1 30.67 ? O1B GDP 501 B 1 HETATM 3 O O2B GDP . . . I 6 55.021 8.077 -100.049 1 30.92 ? O2B GDP 501 B 1 HETATM 4 O O3B GDP . . . I 6 55.444 8.696 -97.668 1 35.18 ? O3B GDP 501 B 1 HETATM 5 O O3A GDP . . . I 6 55.64 10.473 -99.596 1 34.07 ? O3A GDP 501 B 1 HETATM 6 P PA GDP . . . I 6 55.043 11.724 -98.8 1 34.26 ? PA GDP 501 B 1 HETATM 7 O O1A GDP . . . I 6 55.969 12.383 -97.819 1 37.25 ? O1A GDP 501 B 1 HETATM 8 O O2A GDP . . . I 6 53.726 11.368 -98.129 1 33.28 ? O2A GDP 501 B 1 HETATM 9 O O5' GDP . . . I 6 54.799 12.697 -100.04 1 31.47 ? O5' GDP 501 B 1 HETATM 10 C C5' GDP . . . I 6 55.954 13.149 -100.754 1 36.34 ? C5' GDP 501 B 1 HETATM 11 C C4' GDP . . . I 6 55.789 14.621 -101.076 1 42.78 ? C4' GDP 501 B 1 HETATM 12 O O4' GDP . . . I 6 54.602 14.79 -101.851 1 40.12 ? O4' GDP 501 B 1 HETATM 13 C C3' GDP . . . I 6 55.594 15.411 -99.797 1 46.62 ? C3' GDP 501 B 1 HETATM 14 O O3' GDP . . . I 6 56.253 16.673 -99.923 1 45.53 ? O3' GDP 501 B 1 HETATM 15 C C2' GDP . . . I 6 54.099 15.631 -99.702 1 42.36 ? C2' GDP 501 B 1 HETATM 16 O O2' GDP . . . I 6 53.767 16.875 -99.08 1 41.69 ? O2' GDP 501 B 1 HETATM 17 C C1' GDP . . . I 6 53.677 15.632 -101.154 1 41.62 ? C1' GDP 501 B 1 HETATM 18 N N9 GDP . . . I 6 52.302 15.109 -101.331 1 41.65 ? N9 GDP 501 B 1 HETATM 19 C C8 GDP . . . I 6 51.802 13.935 -100.901 1 37.4 ? C8 GDP 501 B 1 HETATM 20 N N7 GDP . . . I 6 50.501 13.803 -101.267 1 40.89 ? N7 GDP 501 B 1 HETATM 21 C C5 GDP . . . I 6 50.157 14.907 -101.956 1 38.37 ? C5 GDP 501 B 1 HETATM 22 C C6 GDP . . . I 6 48.949 15.417 -102.639 1 39.97 ? C6 GDP 501 B 1 HETATM 23 O O6 GDP . . . I 6 47.892 14.753 -102.659 1 38.83 ? O6 GDP 501 B 1 HETATM 24 N N1 GDP . . . I 6 49.021 16.613 -103.232 1 38.16 ? N1 GDP 501 B 1 HETATM 25 C C2 GDP . . . I 6 50.139 17.356 -103.229 1 43.43 ? C2 GDP 501 B 1 HETATM 26 N N2 GDP . . . I 6 50.127 18.561 -103.853 1 41.49 ? N2 GDP 501 B 1 HETATM 27 N N3 GDP . . . I 6 51.283 16.95 -102.629 1 36.47 ? N3 GDP 501 B 1 HETATM 28 C C4 GDP . . . I 6 51.35 15.759 -101.996 1 40.33 ? C4 GDP 501 B 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 297 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 28 #