data_4LWD # _model_server_result.job_id nNVn4wdHGL7EGbnHcccNPw _model_server_result.datetime_utc '2024-11-04 22:43:09' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4lwd # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":203}' # _entry.id 4LWD # _exptl.entry_id 4LWD _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4LWD _cell.length_a 82.045 _cell.length_b 82.045 _cell.length_c 82.045 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4LWD _symmetry.cell_setting ? _symmetry.Int_Tables_number 213 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 3 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 PISA hexameric 6 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F 1 1 A,B,C,D,E,F 2 1,2,3,4,5,6 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 5_555 z,x,y 0 0 1 1 0 0 0 1 0 0 0 0 3 'crystal symmetry operation' 9_555 y,z,x 0 1 0 0 0 1 1 0 0 0 0 0 4 'crystal symmetry operation' 14_555 -y+3/4,-x+3/4,-z+3/4 0 -1 0 -1 0 0 0 0 -1 61.53375 61.53375 61.53375 5 'crystal symmetry operation' 19_555 -x+3/4,-z+3/4,-y+3/4 -1 0 0 0 0 -1 0 -1 0 61.53375 61.53375 61.53375 6 'crystal symmetry operation' 24_555 -z+3/4,-y+3/4,-x+3/4 0 0 -1 0 -1 0 -1 0 0 61.53375 61.53375 61.53375 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD2 ASP 45 A ASP 58 1_555 D MG MG . A MG 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.104 ? metalc ? metalc2 D MG MG . A MG 203 1_555 F O HOH . A HOH 310 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.168 ? metalc ? metalc3 D MG MG . A MG 203 1_555 F O HOH . A HOH 328 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.455 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4LWD _atom_sites.fract_transf_matrix[1][1] 0.012188 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012188 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012188 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 A 1 201 2 SO4 SO4 . C 2 SO4 A 1 202 3 SO4 SO4 . D 3 MG A 1 203 1 MG MG . E 2 SO4 A 1 204 1 SO4 SO4 . F 4 HOH A 1 301 1 HOH HOH . F 4 HOH A 2 302 2 HOH HOH . F 4 HOH A 3 303 3 HOH HOH . F 4 HOH A 4 304 4 HOH HOH . F 4 HOH A 5 305 5 HOH HOH . F 4 HOH A 6 306 6 HOH HOH . F 4 HOH A 7 307 7 HOH HOH . F 4 HOH A 8 308 8 HOH HOH . F 4 HOH A 9 309 9 HOH HOH . F 4 HOH A 10 310 10 HOH HOH . F 4 HOH A 11 311 11 HOH HOH . F 4 HOH A 12 312 12 HOH HOH . F 4 HOH A 13 313 13 HOH HOH . F 4 HOH A 14 314 14 HOH HOH . F 4 HOH A 15 315 15 HOH HOH . F 4 HOH A 16 316 16 HOH HOH . F 4 HOH A 17 317 17 HOH HOH . F 4 HOH A 18 318 18 HOH HOH . F 4 HOH A 19 319 19 HOH HOH . F 4 HOH A 20 320 20 HOH HOH . F 4 HOH A 21 321 21 HOH HOH . F 4 HOH A 22 322 22 HOH HOH . F 4 HOH A 23 323 23 HOH HOH . F 4 HOH A 24 324 24 HOH HOH . F 4 HOH A 25 325 25 HOH HOH . F 4 HOH A 26 326 26 HOH HOH . F 4 HOH A 27 327 27 HOH HOH . F 4 HOH A 28 328 28 HOH HOH . F 4 HOH A 29 329 29 HOH HOH . F 4 HOH A 30 330 30 HOH HOH . F 4 HOH A 31 331 31 HOH HOH . F 4 HOH A 32 332 32 HOH HOH . F 4 HOH A 33 333 33 HOH HOH . F 4 HOH A 34 334 34 HOH HOH . F 4 HOH A 35 335 35 HOH HOH . F 4 HOH A 36 336 36 HOH HOH . F 4 HOH A 37 337 37 HOH HOH . F 4 HOH A 38 338 38 HOH HOH . F 4 HOH A 39 339 39 HOH HOH . F 4 HOH A 40 340 40 HOH HOH . F 4 HOH A 41 341 41 HOH HOH . F 4 HOH A 42 342 42 HOH HOH . F 4 HOH A 43 343 43 HOH HOH . F 4 HOH A 44 344 44 HOH HOH . F 4 HOH A 45 345 45 HOH HOH . F 4 HOH A 46 346 46 HOH HOH . F 4 HOH A 47 347 47 HOH HOH . F 4 HOH A 48 348 48 HOH HOH . F 4 HOH A 49 349 49 HOH HOH . F 4 HOH A 50 350 50 HOH HOH . F 4 HOH A 51 351 51 HOH HOH . F 4 HOH A 52 352 52 HOH HOH . F 4 HOH A 53 353 53 HOH HOH . F 4 HOH A 54 354 54 HOH HOH . F 4 HOH A 55 355 55 HOH HOH . F 4 HOH A 56 356 56 HOH HOH . F 4 HOH A 57 357 57 HOH HOH . F 4 HOH A 58 358 58 HOH HOH . F 4 HOH A 59 359 59 HOH HOH . F 4 HOH A 60 360 60 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 3 _atom_site.Cartn_x 29.686 _atom_site.Cartn_y 40.751 _atom_site.Cartn_z 18.832 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 29.76 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 203 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 272 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #