data_4LWS # _model_server_result.job_id 4B3T92meVhIvHmDk4foKQw _model_server_result.datetime_utc '2024-11-24 21:28:03' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4lws # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"P","auth_seq_id":204}' # _entry.id 4LWS # _exptl.entry_id 4LWS _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4LWS _cell.length_a 56.253 _cell.length_b 69.805 _cell.length_c 128.406 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4LWS _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 PISA dimeric 2 software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,H,I,J,K,L,R 1 1 B,M,N,O,P,Q,S 2 1 A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 K N N ? 4 L N N ? 4 N N N ? 4 O N N ? 4 P N N ? 4 Q N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C SER 26 B SER 20 1_555 A N MSE 27 B MSE 21 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale2 A C MSE 27 B MSE 21 1_555 A N THR 28 B THR 22 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale3 B C ALA 42 A ALA 11 1_555 B N MSE 43 A MSE 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale4 B C MSE 43 A MSE 12 1_555 B N ALA 44 A ALA 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale5 B C GLY 59 A GLY 28 1_555 B N MSE 60 A MSE 29 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale6 B C MSE 60 A MSE 29 1_555 B N GLN 61 A GLN 30 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale7 B C SER 80 A SER 49 1_555 B N MSE 81 A MSE 50 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale8 B C MSE 81 A MSE 50 1_555 B N ALA 82 A ALA 51 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale9 B C GLY 103 A GLY 72 1_555 B N MSE 104 A MSE 73 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale10 B C MSE 104 A MSE 73 1_555 B N HIS 105 A HIS 74 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale11 A C ASP 71 B ASP 65 1_555 A N MSE 72 B MSE 66 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.338 ? covale ? covale12 A C MSE 72 B MSE 66 1_555 A N GLN 73 B GLN 67 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # _atom_sites.entry_id 4LWS _atom_sites.fract_transf_matrix[1][1] 0.017777 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014326 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007788 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 ACT B 1 101 1 ACT ACT . D 3 ACT B 1 102 3 ACT ACT . E 3 ACT B 1 103 5 ACT ACT . F 3 ACT B 1 104 6 ACT ACT . G 3 ACT B 1 105 7 ACT ACT . H 3 ACT B 1 106 8 ACT ACT . I 3 ACT B 1 107 9 ACT ACT . J 3 ACT B 1 108 10 ACT ACT . K 4 GOL B 1 109 2 GOL GOL . L 4 GOL B 1 110 7 GOL GOL . M 3 ACT A 1 201 11 ACT ACT . N 4 GOL A 1 202 3 GOL GOL . O 4 GOL A 1 203 4 GOL GOL . P 4 GOL A 1 204 5 GOL GOL . Q 4 GOL A 1 205 6 GOL GOL . R 5 HOH B 1 201 2 HOH HOH . R 5 HOH B 2 202 4 HOH HOH . R 5 HOH B 3 203 5 HOH HOH . R 5 HOH B 4 204 6 HOH HOH . R 5 HOH B 5 205 9 HOH HOH . R 5 HOH B 6 206 10 HOH HOH . R 5 HOH B 7 207 12 HOH HOH . R 5 HOH B 8 208 13 HOH HOH . R 5 HOH B 9 209 14 HOH HOH . R 5 HOH B 10 210 15 HOH HOH . R 5 HOH B 11 211 16 HOH HOH . R 5 HOH B 12 212 25 HOH HOH . R 5 HOH B 13 213 26 HOH HOH . R 5 HOH B 14 214 29 HOH HOH . R 5 HOH B 15 215 33 HOH HOH . R 5 HOH B 16 216 34 HOH HOH . R 5 HOH B 17 217 37 HOH HOH . R 5 HOH B 18 218 40 HOH HOH . R 5 HOH B 19 219 42 HOH HOH . R 5 HOH B 20 220 43 HOH HOH . R 5 HOH B 21 221 44 HOH HOH . R 5 HOH B 22 222 46 HOH HOH . R 5 HOH B 23 223 51 HOH HOH . R 5 HOH B 24 224 52 HOH HOH . R 5 HOH B 25 225 54 HOH HOH . R 5 HOH B 26 226 57 HOH HOH . R 5 HOH B 27 227 58 HOH HOH . R 5 HOH B 28 228 63 HOH HOH . R 5 HOH B 29 229 66 HOH HOH . R 5 HOH B 30 230 67 HOH HOH . R 5 HOH B 31 231 68 HOH HOH . R 5 HOH B 32 232 73 HOH HOH . R 5 HOH B 33 233 77 HOH HOH . R 5 HOH B 34 234 78 HOH HOH . R 5 HOH B 35 235 79 HOH HOH . R 5 HOH B 36 236 80 HOH HOH . R 5 HOH B 37 237 82 HOH HOH . R 5 HOH B 38 238 84 HOH HOH . R 5 HOH B 39 239 85 HOH HOH . R 5 HOH B 40 240 87 HOH HOH . R 5 HOH B 41 241 88 HOH HOH . R 5 HOH B 42 242 89 HOH HOH . R 5 HOH B 43 243 90 HOH HOH . R 5 HOH B 44 244 93 HOH HOH . R 5 HOH B 45 245 95 HOH HOH . R 5 HOH B 46 246 96 HOH HOH . R 5 HOH B 47 247 97 HOH HOH . R 5 HOH B 48 248 98 HOH HOH . R 5 HOH B 49 249 101 HOH HOH . R 5 HOH B 50 250 103 HOH HOH . R 5 HOH B 51 251 107 HOH HOH . R 5 HOH B 52 252 108 HOH HOH . R 5 HOH B 53 253 116 HOH HOH . R 5 HOH B 54 254 125 HOH HOH . R 5 HOH B 55 255 126 HOH HOH . R 5 HOH B 56 256 127 HOH HOH . R 5 HOH B 57 257 130 HOH HOH . R 5 HOH B 58 258 138 HOH HOH . R 5 HOH B 59 259 141 HOH HOH . R 5 HOH B 60 260 147 HOH HOH . R 5 HOH B 61 261 154 HOH HOH . R 5 HOH B 62 262 156 HOH HOH . S 5 HOH A 1 301 1 HOH HOH . S 5 HOH A 2 302 3 HOH HOH . S 5 HOH A 3 303 7 HOH HOH . S 5 HOH A 4 304 8 HOH HOH . S 5 HOH A 5 305 11 HOH HOH . S 5 HOH A 6 306 17 HOH HOH . S 5 HOH A 7 307 18 HOH HOH . S 5 HOH A 8 308 19 HOH HOH . S 5 HOH A 9 309 20 HOH HOH . S 5 HOH A 10 310 21 HOH HOH . S 5 HOH A 11 311 22 HOH HOH . S 5 HOH A 12 312 23 HOH HOH . S 5 HOH A 13 313 24 HOH HOH . S 5 HOH A 14 314 27 HOH HOH . S 5 HOH A 15 315 28 HOH HOH . S 5 HOH A 16 316 30 HOH HOH . S 5 HOH A 17 317 31 HOH HOH . S 5 HOH A 18 318 32 HOH HOH . S 5 HOH A 19 319 35 HOH HOH . S 5 HOH A 20 320 36 HOH HOH . S 5 HOH A 21 321 38 HOH HOH . S 5 HOH A 22 322 39 HOH HOH . S 5 HOH A 23 323 41 HOH HOH . S 5 HOH A 24 324 45 HOH HOH . S 5 HOH A 25 325 47 HOH HOH . S 5 HOH A 26 326 48 HOH HOH . S 5 HOH A 27 327 49 HOH HOH . S 5 HOH A 28 328 50 HOH HOH . S 5 HOH A 29 329 55 HOH HOH . S 5 HOH A 30 330 59 HOH HOH . S 5 HOH A 31 331 60 HOH HOH . S 5 HOH A 32 332 61 HOH HOH . S 5 HOH A 33 333 62 HOH HOH . S 5 HOH A 34 334 65 HOH HOH . S 5 HOH A 35 335 70 HOH HOH . S 5 HOH A 36 336 71 HOH HOH . S 5 HOH A 37 337 72 HOH HOH . S 5 HOH A 38 338 74 HOH HOH . S 5 HOH A 39 339 75 HOH HOH . S 5 HOH A 40 340 76 HOH HOH . S 5 HOH A 41 341 83 HOH HOH . S 5 HOH A 42 342 92 HOH HOH . S 5 HOH A 43 343 94 HOH HOH . S 5 HOH A 44 344 102 HOH HOH . S 5 HOH A 45 345 104 HOH HOH . S 5 HOH A 46 346 114 HOH HOH . S 5 HOH A 47 347 120 HOH HOH . S 5 HOH A 48 348 122 HOH HOH . S 5 HOH A 49 349 129 HOH HOH . S 5 HOH A 50 350 135 HOH HOH . S 5 HOH A 51 351 136 HOH HOH . S 5 HOH A 52 352 137 HOH HOH . S 5 HOH A 53 353 140 HOH HOH . S 5 HOH A 54 354 151 HOH HOH . S 5 HOH A 55 355 152 HOH HOH . S 5 HOH A 56 356 153 HOH HOH . S 5 HOH A 57 357 157 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . P 4 46.364 31.549 -32.64 1 59.92 ? C1 GOL 204 A 1 HETATM 2 O O1 GOL . . . P 4 46.282 32.926 -32.341 1 67.65 ? O1 GOL 204 A 1 HETATM 3 C C2 GOL . . . P 4 47.444 30.898 -31.777 1 60.2 ? C2 GOL 204 A 1 HETATM 4 O O2 GOL . . . P 4 48.441 31.847 -31.462 1 58.95 ? O2 GOL 204 A 1 HETATM 5 C C3 GOL . . . P 4 48.078 29.739 -32.542 1 57.92 ? C3 GOL 204 A 1 HETATM 6 O O3 GOL . . . P 4 48.999 29.084 -31.698 1 52.04 ? O3 GOL 204 A 1 # _model_server_stats.io_time_ms 5 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 214 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 6 #