data_4LWU # _model_server_result.job_id SEKT-nHewIouoVsqP1HWvg _model_server_result.datetime_utc '2025-01-11 09:41:32' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4lwu # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 4LWU # _exptl.entry_id 4LWU _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 583.481 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "(2'S,3R,4'S,5'R)-N-(4-carbamoylphenyl)-6-chloro-4'-(3-chloro-2-fluorophenyl)-2'-(2,2-dimethylpropyl)-2-oxo-1,2-dihydrospiro[indole-3,3'-pyrrolidine]-5'-carboxamide" _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4LWU _cell.length_a 40.554 _cell.length_b 78.341 _cell.length_c 24.703 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4LWU _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C30 H29 Cl2 F N4 O3' _chem_comp.formula_weight 583.481 _chem_comp.id 20U _chem_comp.mon_nstd_flag . _chem_comp.name "(2'S,3R,4'S,5'R)-N-(4-carbamoylphenyl)-6-chloro-4'-(3-chloro-2-fluorophenyl)-2'-(2,2-dimethylpropyl)-2-oxo-1,2-dihydrospiro[indole-3,3'-pyrrolidine]-5'-carboxamide" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C23 C22 20U sing 1 n n C25 C22 20U sing 2 n n C22 C21 20U sing 3 n n C22 C24 20U sing 4 n n C21 C11 20U sing 5 n n O2 C2 20U doub 6 n n N12 C11 20U sing 7 n n N12 C13 20U sing 8 n n C2 N1 20U sing 9 n n C2 C3 20U sing 10 n n C11 C3 20U sing 11 n n N1 C9 20U sing 12 n n C44 C45 20U doub 13 n y C44 C43 20U sing 14 n y C45 C46 20U sing 15 n y C3 C8 20U sing 16 n n C3 C14 20U sing 17 n n C9 C7 20U doub 18 n y C9 C8 20U sing 19 n y C13 C41 20U sing 20 n n C13 C14 20U sing 21 n n N42 C43 20U sing 22 n n N42 C41 20U sing 23 n n N51 C51 20U sing 24 n n C7 C6 20U sing 25 n y C43 C48 20U doub 26 n y C8 C4 20U doub 27 n y C41 O41 20U doub 28 n n C14 C31 20U sing 29 n n C46 C51 20U sing 30 n n C46 C47 20U doub 31 n y C36 C31 20U doub 32 n y C36 C35 20U sing 33 n y C51 O51 20U doub 34 n n C6 CL1 20U sing 35 n n C6 C5 20U doub 36 n y C4 C5 20U sing 37 n y C48 C47 20U sing 38 n y C31 C32 20U sing 39 n y C35 C34 20U doub 40 n y C32 F1 20U sing 41 n n C32 C33 20U doub 42 n y C34 C33 20U sing 43 n y C33 CL2 20U sing 44 n n N1 H1 20U sing 45 n n C7 H2 20U sing 46 n n C11 H3 20U sing 47 n n C21 H4 20U sing 48 n n C21 H5 20U sing 49 n n C25 H6 20U sing 50 n n C25 H7 20U sing 51 n n C25 H8 20U sing 52 n n C24 H9 20U sing 53 n n C24 H10 20U sing 54 n n C24 H11 20U sing 55 n n C23 H12 20U sing 56 n n C23 H13 20U sing 57 n n C23 H14 20U sing 58 n n N12 H15 20U sing 59 n n C14 H17 20U sing 60 n n C36 H18 20U sing 61 n n C35 H19 20U sing 62 n n C34 H20 20U sing 63 n n C13 H21 20U sing 64 n n N42 H22 20U sing 65 n n C48 H23 20U sing 66 n n C44 H24 20U sing 67 n n C45 H25 20U sing 68 n n N51 H26 20U sing 69 n n N51 H27 20U sing 70 n n C47 H28 20U sing 71 n n C4 H29 20U sing 72 n n C5 H30 20U sing 73 n n # _atom_sites.entry_id 4LWU _atom_sites.fract_transf_matrix[1][1] 0.024658 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012765 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.040481 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 20U A 1 201 1 20U 252 . C 3 SO4 A 1 202 1 SO4 SO4 . D 4 HOH A 1 301 2 HOH HOH . D 4 HOH A 2 302 3 HOH HOH . D 4 HOH A 3 303 4 HOH HOH . D 4 HOH A 4 304 5 HOH HOH . D 4 HOH A 5 305 6 HOH HOH . D 4 HOH A 6 306 7 HOH HOH . D 4 HOH A 7 307 8 HOH HOH . D 4 HOH A 8 308 9 HOH HOH . D 4 HOH A 9 309 10 HOH HOH . D 4 HOH A 10 310 11 HOH HOH . D 4 HOH A 11 311 12 HOH HOH . D 4 HOH A 12 312 13 HOH HOH . D 4 HOH A 13 313 14 HOH HOH . D 4 HOH A 14 314 15 HOH HOH . D 4 HOH A 15 315 16 HOH HOH . D 4 HOH A 16 316 17 HOH HOH . D 4 HOH A 17 317 18 HOH HOH . D 4 HOH A 18 318 19 HOH HOH . D 4 HOH A 19 319 20 HOH HOH . D 4 HOH A 20 320 21 HOH HOH . D 4 HOH A 21 321 22 HOH HOH . D 4 HOH A 22 322 23 HOH HOH . D 4 HOH A 23 323 24 HOH HOH . D 4 HOH A 24 324 25 HOH HOH . D 4 HOH A 25 325 26 HOH HOH . D 4 HOH A 26 326 27 HOH HOH . D 4 HOH A 27 327 28 HOH HOH . D 4 HOH A 28 328 29 HOH HOH . D 4 HOH A 29 329 30 HOH HOH . D 4 HOH A 30 330 31 HOH HOH . D 4 HOH A 31 331 32 HOH HOH . D 4 HOH A 32 332 33 HOH HOH . D 4 HOH A 33 333 34 HOH HOH . D 4 HOH A 34 334 35 HOH HOH . D 4 HOH A 35 335 36 HOH HOH . D 4 HOH A 36 336 37 HOH HOH . D 4 HOH A 37 337 38 HOH HOH . D 4 HOH A 38 338 39 HOH HOH . D 4 HOH A 39 339 40 HOH HOH . D 4 HOH A 40 340 41 HOH HOH . D 4 HOH A 41 341 42 HOH HOH . D 4 HOH A 42 342 43 HOH HOH . D 4 HOH A 43 343 44 HOH HOH . D 4 HOH A 44 344 45 HOH HOH . D 4 HOH A 45 345 46 HOH HOH . D 4 HOH A 46 346 47 HOH HOH . D 4 HOH A 47 347 48 HOH HOH . D 4 HOH A 48 348 49 HOH HOH . D 4 HOH A 49 349 50 HOH HOH . D 4 HOH A 50 350 51 HOH HOH . D 4 HOH A 51 351 52 HOH HOH . D 4 HOH A 52 352 53 HOH HOH . D 4 HOH A 53 353 54 HOH HOH . D 4 HOH A 54 354 55 HOH HOH . D 4 HOH A 55 355 56 HOH HOH . D 4 HOH A 56 356 57 HOH HOH . D 4 HOH A 57 357 58 HOH HOH . D 4 HOH A 58 358 59 HOH HOH . D 4 HOH A 59 359 60 HOH HOH . D 4 HOH A 60 360 61 HOH HOH . D 4 HOH A 61 361 62 HOH HOH . D 4 HOH A 62 362 63 HOH HOH . D 4 HOH A 63 363 64 HOH HOH . D 4 HOH A 64 364 65 HOH HOH . D 4 HOH A 65 365 66 HOH HOH . D 4 HOH A 66 366 67 HOH HOH . D 4 HOH A 67 367 68 HOH HOH . D 4 HOH A 68 368 69 HOH HOH . D 4 HOH A 69 369 70 HOH HOH . D 4 HOH A 70 370 71 HOH HOH . D 4 HOH A 71 371 72 HOH HOH . D 4 HOH A 72 372 73 HOH HOH . D 4 HOH A 73 373 74 HOH HOH . D 4 HOH A 74 374 75 HOH HOH . D 4 HOH A 75 375 76 HOH HOH . D 4 HOH A 76 376 77 HOH HOH . D 4 HOH A 77 377 78 HOH HOH . D 4 HOH A 78 378 79 HOH HOH . D 4 HOH A 79 379 80 HOH HOH . D 4 HOH A 80 380 81 HOH HOH . D 4 HOH A 81 381 82 HOH HOH . D 4 HOH A 82 382 83 HOH HOH . D 4 HOH A 83 383 84 HOH HOH . D 4 HOH A 84 384 85 HOH HOH . D 4 HOH A 85 385 86 HOH HOH . D 4 HOH A 86 386 87 HOH HOH . D 4 HOH A 87 387 88 HOH HOH . D 4 HOH A 88 388 89 HOH HOH . D 4 HOH A 89 389 90 HOH HOH . D 4 HOH A 90 390 91 HOH HOH . D 4 HOH A 91 391 92 HOH HOH . D 4 HOH A 92 392 93 HOH HOH . D 4 HOH A 93 393 94 HOH HOH . D 4 HOH A 94 394 95 HOH HOH . D 4 HOH A 95 395 96 HOH HOH . D 4 HOH A 96 396 97 HOH HOH . D 4 HOH A 97 397 98 HOH HOH . D 4 HOH A 98 398 99 HOH HOH . D 4 HOH A 99 399 100 HOH HOH . D 4 HOH A 100 400 101 HOH HOH . D 4 HOH A 101 401 102 HOH HOH . D 4 HOH A 102 402 103 HOH HOH . D 4 HOH A 103 403 104 HOH HOH . D 4 HOH A 104 404 105 HOH HOH . D 4 HOH A 105 405 106 HOH HOH . D 4 HOH A 106 406 107 HOH HOH . D 4 HOH A 107 407 108 HOH HOH . D 4 HOH A 108 408 109 HOH HOH . D 4 HOH A 109 409 110 HOH HOH . D 4 HOH A 110 410 111 HOH HOH . D 4 HOH A 111 411 112 HOH HOH . D 4 HOH A 112 412 113 HOH HOH . D 4 HOH A 113 413 114 HOH HOH . D 4 HOH A 114 414 115 HOH HOH . D 4 HOH A 115 415 116 HOH HOH . D 4 HOH A 116 416 117 HOH HOH . D 4 HOH A 117 417 118 HOH HOH . D 4 HOH A 118 418 119 HOH HOH . D 4 HOH A 119 419 120 HOH HOH . D 4 HOH A 120 420 121 HOH HOH . D 4 HOH A 121 421 122 HOH HOH . D 4 HOH A 122 422 123 HOH HOH . D 4 HOH A 123 423 124 HOH HOH . D 4 HOH A 124 424 125 HOH HOH . D 4 HOH A 125 425 126 HOH HOH . D 4 HOH A 126 426 127 HOH HOH . D 4 HOH A 127 427 128 HOH HOH . D 4 HOH A 128 428 129 HOH HOH . D 4 HOH A 129 429 130 HOH HOH . D 4 HOH A 130 430 131 HOH HOH . D 4 HOH A 131 431 132 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 20U . . . B 2 -11.055 16.189 -7.066 1 9.24 ? N1 20U 201 A 1 HETATM 2 C C9 20U . . . B 2 -12.114 15.918 -6.153 1 7.12 ? C9 20U 201 A 1 HETATM 3 C C7 20U . . . B 2 -12.57 14.674 -5.826 1 8.58 ? C7 20U 201 A 1 HETATM 4 C C6 20U . . . B 2 -13.592 14.622 -4.882 1 6.72 ? C6 20U 201 A 1 HETATM 5 CL CL1 20U . . . B 2 -14.198 13.093 -4.366 1 9.19 ? CL1 20U 201 A 1 HETATM 6 C C2 20U . . . B 2 -10.861 17.586 -7.129 1 8.07 ? C2 20U 201 A 1 HETATM 7 O O2 20U . . . B 2 -9.972 18.121 -7.799 1 10.13 ? O2 20U 201 A 1 HETATM 8 C C3 20U . . . B 2 -11.915 18.271 -6.258 1 7.34 ? C3 20U 201 A 1 HETATM 9 C C11 20U . . . B 2 -12.813 19.132 -7.12 1 7.36 ? C11 20U 201 A 1 HETATM 10 C C21 20U . . . B 2 -13.19 18.448 -8.443 1 10.05 ? C21 20U 201 A 1 HETATM 11 C C22 20U . . . B 2 -14.536 18.981 -8.979 1 10.49 ? C22 20U 201 A 1 HETATM 12 C C25 20U . . . B 2 -14.526 20.512 -8.995 1 14.61 ? C25 20U 201 A 1 HETATM 13 C C24 20U . . . B 2 -15.669 18.49 -8.073 1 14.52 ? C24 20U 201 A 1 HETATM 14 C C23 20U . . . B 2 -14.764 18.458 -10.402 1 13.75 ? C23 20U 201 A 1 HETATM 15 N N12 20U . . . B 2 -12.007 20.363 -7.351 1 8.44 ? N12 20U 201 A 1 HETATM 16 C C14 20U . . . B 2 -11.33 19.288 -5.277 1 7.3 ? C14 20U 201 A 1 HETATM 17 C C31 20U . . . B 2 -10.083 18.826 -4.556 1 8.29 ? C31 20U 201 A 1 HETATM 18 C C36 20U . . . B 2 -8.804 19.06 -5.07 1 9.62 ? C36 20U 201 A 1 HETATM 19 C C35 20U . . . B 2 -7.674 18.645 -4.329 1 11.16 ? C35 20U 201 A 1 HETATM 20 C C34 20U . . . B 2 -7.837 17.998 -3.089 1 10.95 ? C34 20U 201 A 1 HETATM 21 C C32 20U . . . B 2 -10.199 18.189 -3.35 1 7.49 ? C32 20U 201 A 1 HETATM 22 F F1 20U . . . B 2 -11.433 17.981 -2.851 1 7.57 ? F1 20U 201 A 1 HETATM 23 C C33 20U . . . B 2 -9.122 17.763 -2.616 1 9.51 ? C33 20U 201 A 1 HETATM 24 CL CL2 20U . . . B 2 -9.371 16.926 -1.106 1 8.78 ? CL2 20U 201 A 1 HETATM 25 C C13 20U . . . B 2 -11.098 20.527 -6.151 1 7.97 ? C13 20U 201 A 1 HETATM 26 C C41 20U . . . B 2 -11.46 21.787 -5.438 1 8.57 ? C41 20U 201 A 1 HETATM 27 N N42 20U . . . B 2 -12.405 22.583 -6.121 1 8.62 ? N42 20U 201 A 1 HETATM 28 C C43 20U . . . B 2 -12.833 23.908 -5.757 1 8.98 ? C43 20U 201 A 1 HETATM 29 C C48 20U . . . B 2 -12.411 24.503 -4.576 1 10.52 ? C48 20U 201 A 1 HETATM 30 C C44 20U . . . B 2 -13.669 24.561 -6.652 1 11.21 ? C44 20U 201 A 1 HETATM 31 C C45 20U . . . B 2 -14.061 25.858 -6.393 1 13.9 ? C45 20U 201 A 1 HETATM 32 C C46 20U . . . B 2 -13.621 26.506 -5.237 1 15.11 ? C46 20U 201 A 1 HETATM 33 C C51 20U . . . B 2 -13.999 27.901 -4.997 1 16.83 ? C51 20U 201 A 1 HETATM 34 O O51 20U . . . B 2 -13.708 28.523 -3.964 1 19.78 ? O51 20U 201 A 1 HETATM 35 N N51 20U . . . B 2 -14.718 28.55 -5.984 1 19.08 ? N51 20U 201 A 1 HETATM 36 C C47 20U . . . B 2 -12.807 25.813 -4.313 1 13.47 ? C47 20U 201 A 1 HETATM 37 O O41 20U . . . B 2 -10.993 22.121 -4.348 1 9.08 ? O41 20U 201 A 1 HETATM 38 C C8 20U . . . B 2 -12.607 17.074 -5.652 1 6.57 ? C8 20U 201 A 1 HETATM 39 C C4 20U . . . B 2 -13.624 17.068 -4.724 1 7.43 ? C4 20U 201 A 1 HETATM 40 C C5 20U . . . B 2 -14.137 15.814 -4.325 1 7.38 ? C5 20U 201 A 1 # _model_server_stats.io_time_ms 49 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 22 _model_server_stats.query_time_ms 363 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 40 #