data_4LYH # _model_server_result.job_id 6DQpLZOi8r4KxJ9FD1spSw _model_server_result.datetime_utc '2024-11-22 16:26:53' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4lyh # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":202}' # _entry.id 4LYH # _exptl.entry_id 4LYH _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 443.201 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "GUANOSINE-5'-DIPHOSPHATE" _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 111.13 _cell.angle_gamma 90 _cell.entry_id 4LYH _cell.length_a 68.029 _cell.length_b 83.525 _cell.length_c 86.975 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4LYH _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? trimeric 3 author_defined_assembly 1 PISA monomeric 1 software_defined_assembly 2 PISA monomeric 1 software_defined_assembly 3 PISA monomeric 1 software_defined_assembly 4 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G,H,I,J,K,L,M 1 1 A,D,E,K 2 1 B,F,G,L 3 1 C,H,I,J,M 4 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 G N N ? 3 J N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 B SG CYS 13 B CYS 12 1_555 F C17 21F . B 21F 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.826 ? covale ? covale2 C SG CYS 13 C CYS 12 1_555 I C17 21F . C 21F 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.83 ? # _chem_comp.formula 'C10 H15 N5 O11 P2' _chem_comp.formula_weight 443.201 _chem_comp.id GDP _chem_comp.mon_nstd_flag n _chem_comp.name "GUANOSINE-5'-DIPHOSPHATE" _chem_comp.type 'rna linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PB O1B GDP doub 133 n n PB O2B GDP sing 134 n n PB O3B GDP sing 135 n n PB O3A GDP sing 136 n n O2B HOB2 GDP sing 137 n n O3B HOB3 GDP sing 138 n n O3A PA GDP sing 139 n n PA O1A GDP doub 140 n n PA O2A GDP sing 141 n n PA O5' GDP sing 142 n n O2A HOA2 GDP sing 143 n n O5' C5' GDP sing 144 n n C5' C4' GDP sing 145 n n C5' H5' GDP sing 146 n n C5' "H5''" GDP sing 147 n n C4' O4' GDP sing 148 n n C4' C3' GDP sing 149 n n C4' H4' GDP sing 150 n n O4' C1' GDP sing 151 n n C3' O3' GDP sing 152 n n C3' C2' GDP sing 153 n n C3' H3' GDP sing 154 n n O3' HO3' GDP sing 155 n n C2' O2' GDP sing 156 n n C2' C1' GDP sing 157 n n C2' H2' GDP sing 158 n n O2' HO2' GDP sing 159 n n C1' N9 GDP sing 160 n n C1' H1' GDP sing 161 n n N9 C8 GDP sing 162 n y N9 C4 GDP sing 163 n y C8 N7 GDP doub 164 n y C8 H8 GDP sing 165 n n N7 C5 GDP sing 166 n y C5 C6 GDP sing 167 n n C5 C4 GDP doub 168 n y C6 O6 GDP doub 169 n n C6 N1 GDP sing 170 n n N1 C2 GDP sing 171 n n N1 HN1 GDP sing 172 n n C2 N2 GDP sing 173 n n C2 N3 GDP doub 174 n n N2 HN21 GDP sing 175 n n N2 HN22 GDP sing 176 n n N3 C4 GDP sing 177 n n # _atom_sites.entry_id 4LYH _atom_sites.fract_transf_matrix[1][1] 0.0147 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.005681 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011972 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012326 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 SO4 A 1 201 200 SO4 SO4 . E 3 GDP A 1 202 220 GDP GDP . F 4 21F B 1 201 210 21F LIG . G 3 GDP B 1 202 220 GDP GDP . H 2 SO4 C 1 201 200 SO4 SO4 . I 4 21F C 1 202 210 21F LIG . J 3 GDP C 1 203 220 GDP GDP . K 5 HOH A 1 301 1 HOH HOH . K 5 HOH A 2 302 7 HOH HOH . K 5 HOH A 3 303 8 HOH HOH . K 5 HOH A 4 304 9 HOH HOH . K 5 HOH A 5 305 13 HOH HOH . K 5 HOH A 6 306 18 HOH HOH . K 5 HOH A 7 307 19 HOH HOH . K 5 HOH A 8 308 22 HOH HOH . K 5 HOH A 9 309 24 HOH HOH . K 5 HOH A 10 310 26 HOH HOH . K 5 HOH A 11 311 29 HOH HOH . K 5 HOH A 12 312 30 HOH HOH . K 5 HOH A 13 313 31 HOH HOH . K 5 HOH A 14 314 34 HOH HOH . K 5 HOH A 15 315 36 HOH HOH . K 5 HOH A 16 316 37 HOH HOH . K 5 HOH A 17 317 39 HOH HOH . K 5 HOH A 18 318 40 HOH HOH . K 5 HOH A 19 319 44 HOH HOH . K 5 HOH A 20 320 46 HOH HOH . K 5 HOH A 21 321 49 HOH HOH . K 5 HOH A 22 322 50 HOH HOH . K 5 HOH A 23 323 53 HOH HOH . K 5 HOH A 24 324 57 HOH HOH . K 5 HOH A 25 325 59 HOH HOH . K 5 HOH A 26 326 60 HOH HOH . K 5 HOH A 27 327 62 HOH HOH . K 5 HOH A 28 328 63 HOH HOH . K 5 HOH A 29 329 67 HOH HOH . K 5 HOH A 30 330 68 HOH HOH . K 5 HOH A 31 331 72 HOH HOH . K 5 HOH A 32 332 73 HOH HOH . K 5 HOH A 33 333 75 HOH HOH . K 5 HOH A 34 334 77 HOH HOH . K 5 HOH A 35 335 81 HOH HOH . K 5 HOH A 36 336 83 HOH HOH . K 5 HOH A 37 337 84 HOH HOH . K 5 HOH A 38 338 85 HOH HOH . K 5 HOH A 39 339 86 HOH HOH . K 5 HOH A 40 340 87 HOH HOH . K 5 HOH A 41 341 88 HOH HOH . K 5 HOH A 42 342 89 HOH HOH . K 5 HOH A 43 343 95 HOH HOH . K 5 HOH A 44 344 99 HOH HOH . K 5 HOH A 45 345 101 HOH HOH . K 5 HOH A 46 346 102 HOH HOH . K 5 HOH A 47 347 103 HOH HOH . K 5 HOH A 48 348 104 HOH HOH . K 5 HOH A 49 349 106 HOH HOH . K 5 HOH A 50 350 107 HOH HOH . K 5 HOH A 51 351 108 HOH HOH . K 5 HOH A 52 352 111 HOH HOH . K 5 HOH A 53 353 112 HOH HOH . K 5 HOH A 54 354 114 HOH HOH . K 5 HOH A 55 355 119 HOH HOH . K 5 HOH A 56 356 124 HOH HOH . K 5 HOH A 57 357 130 HOH HOH . K 5 HOH A 58 358 131 HOH HOH . K 5 HOH A 59 359 132 HOH HOH . K 5 HOH A 60 360 134 HOH HOH . K 5 HOH A 61 361 140 HOH HOH . K 5 HOH A 62 362 142 HOH HOH . K 5 HOH A 63 363 144 HOH HOH . K 5 HOH A 64 364 145 HOH HOH . K 5 HOH A 65 365 148 HOH HOH . K 5 HOH A 66 366 150 HOH HOH . K 5 HOH A 67 367 152 HOH HOH . K 5 HOH A 68 368 156 HOH HOH . K 5 HOH A 69 369 158 HOH HOH . K 5 HOH A 70 370 159 HOH HOH . K 5 HOH A 71 371 162 HOH HOH . K 5 HOH A 72 372 163 HOH HOH . K 5 HOH A 73 373 164 HOH HOH . K 5 HOH A 74 374 165 HOH HOH . K 5 HOH A 75 375 170 HOH HOH . K 5 HOH A 76 376 174 HOH HOH . K 5 HOH A 77 377 176 HOH HOH . K 5 HOH A 78 378 180 HOH HOH . K 5 HOH A 79 379 181 HOH HOH . K 5 HOH A 80 380 183 HOH HOH . K 5 HOH A 81 381 186 HOH HOH . K 5 HOH A 82 382 192 HOH HOH . K 5 HOH A 83 383 193 HOH HOH . K 5 HOH A 84 384 196 HOH HOH . K 5 HOH A 85 385 198 HOH HOH . K 5 HOH A 86 386 203 HOH HOH . K 5 HOH A 87 387 205 HOH HOH . K 5 HOH A 88 388 209 HOH HOH . K 5 HOH A 89 389 214 HOH HOH . K 5 HOH A 90 390 215 HOH HOH . K 5 HOH A 91 391 218 HOH HOH . K 5 HOH A 92 392 219 HOH HOH . K 5 HOH A 93 393 221 HOH HOH . K 5 HOH A 94 394 223 HOH HOH . K 5 HOH A 95 395 224 HOH HOH . K 5 HOH A 96 396 226 HOH HOH . K 5 HOH A 97 397 227 HOH HOH . K 5 HOH A 98 398 228 HOH HOH . K 5 HOH A 99 399 231 HOH HOH . K 5 HOH A 100 400 232 HOH HOH . K 5 HOH A 101 401 233 HOH HOH . K 5 HOH A 102 402 234 HOH HOH . K 5 HOH A 103 403 235 HOH HOH . K 5 HOH A 104 404 238 HOH HOH . K 5 HOH A 105 405 240 HOH HOH . K 5 HOH A 106 406 242 HOH HOH . K 5 HOH A 107 407 243 HOH HOH . K 5 HOH A 108 408 245 HOH HOH . K 5 HOH A 109 409 247 HOH HOH . K 5 HOH A 110 410 253 HOH HOH . K 5 HOH A 111 411 256 HOH HOH . K 5 HOH A 112 412 257 HOH HOH . K 5 HOH A 113 413 258 HOH HOH . K 5 HOH A 114 414 267 HOH HOH . K 5 HOH A 115 415 271 HOH HOH . K 5 HOH A 116 416 274 HOH HOH . K 5 HOH A 117 417 287 HOH HOH . K 5 HOH A 118 418 294 HOH HOH . K 5 HOH A 119 419 297 HOH HOH . K 5 HOH A 120 420 299 HOH HOH . K 5 HOH A 121 421 306 HOH HOH . K 5 HOH A 122 422 307 HOH HOH . K 5 HOH A 123 423 308 HOH HOH . K 5 HOH A 124 424 310 HOH HOH . K 5 HOH A 125 425 311 HOH HOH . K 5 HOH A 126 426 312 HOH HOH . K 5 HOH A 127 427 314 HOH HOH . K 5 HOH A 128 428 315 HOH HOH . K 5 HOH A 129 429 322 HOH HOH . K 5 HOH A 130 430 324 HOH HOH . K 5 HOH A 131 431 327 HOH HOH . K 5 HOH A 132 432 337 HOH HOH . K 5 HOH A 133 433 339 HOH HOH . K 5 HOH A 134 434 344 HOH HOH . K 5 HOH A 135 435 345 HOH HOH . K 5 HOH A 136 436 348 HOH HOH . K 5 HOH A 137 437 349 HOH HOH . K 5 HOH A 138 438 350 HOH HOH . K 5 HOH A 139 439 353 HOH HOH . K 5 HOH A 140 440 358 HOH HOH . K 5 HOH A 141 441 359 HOH HOH . K 5 HOH A 142 442 360 HOH HOH . K 5 HOH A 143 443 362 HOH HOH . K 5 HOH A 144 444 366 HOH HOH . K 5 HOH A 145 445 367 HOH HOH . K 5 HOH A 146 446 368 HOH HOH . K 5 HOH A 147 447 370 HOH HOH . K 5 HOH A 148 448 374 HOH HOH . K 5 HOH A 149 449 375 HOH HOH . K 5 HOH A 150 450 376 HOH HOH . K 5 HOH A 151 451 377 HOH HOH . K 5 HOH A 152 452 379 HOH HOH . K 5 HOH A 153 453 386 HOH HOH . K 5 HOH A 154 454 387 HOH HOH . L 5 HOH B 1 301 2 HOH HOH . L 5 HOH B 2 302 4 HOH HOH . L 5 HOH B 3 303 6 HOH HOH . L 5 HOH B 4 304 10 HOH HOH . L 5 HOH B 5 305 12 HOH HOH . L 5 HOH B 6 306 14 HOH HOH . L 5 HOH B 7 307 15 HOH HOH . L 5 HOH B 8 308 17 HOH HOH . L 5 HOH B 9 309 20 HOH HOH . L 5 HOH B 10 310 21 HOH HOH . L 5 HOH B 11 311 23 HOH HOH . L 5 HOH B 12 312 25 HOH HOH . L 5 HOH B 13 313 27 HOH HOH . L 5 HOH B 14 314 28 HOH HOH . L 5 HOH B 15 315 32 HOH HOH . L 5 HOH B 16 316 33 HOH HOH . L 5 HOH B 17 317 35 HOH HOH . L 5 HOH B 18 318 38 HOH HOH . L 5 HOH B 19 319 41 HOH HOH . L 5 HOH B 20 320 45 HOH HOH . L 5 HOH B 21 321 48 HOH HOH . L 5 HOH B 22 322 52 HOH HOH . L 5 HOH B 23 323 54 HOH HOH . L 5 HOH B 24 324 61 HOH HOH . L 5 HOH B 25 325 65 HOH HOH . L 5 HOH B 26 326 69 HOH HOH . L 5 HOH B 27 327 70 HOH HOH . L 5 HOH B 28 328 74 HOH HOH . L 5 HOH B 29 329 79 HOH HOH . L 5 HOH B 30 330 92 HOH HOH . L 5 HOH B 31 331 93 HOH HOH . L 5 HOH B 32 332 94 HOH HOH . L 5 HOH B 33 333 96 HOH HOH . L 5 HOH B 34 334 98 HOH HOH . L 5 HOH B 35 335 100 HOH HOH . L 5 HOH B 36 336 105 HOH HOH . L 5 HOH B 37 337 109 HOH HOH . L 5 HOH B 38 338 113 HOH HOH . L 5 HOH B 39 339 115 HOH HOH . L 5 HOH B 40 340 117 HOH HOH . L 5 HOH B 41 341 121 HOH HOH . L 5 HOH B 42 342 122 HOH HOH . L 5 HOH B 43 343 128 HOH HOH . L 5 HOH B 44 344 129 HOH HOH . L 5 HOH B 45 345 136 HOH HOH . L 5 HOH B 46 346 137 HOH HOH . L 5 HOH B 47 347 139 HOH HOH . L 5 HOH B 48 348 143 HOH HOH . L 5 HOH B 49 349 147 HOH HOH . L 5 HOH B 50 350 149 HOH HOH . L 5 HOH B 51 351 153 HOH HOH . L 5 HOH B 52 352 154 HOH HOH . L 5 HOH B 53 353 155 HOH HOH . L 5 HOH B 54 354 157 HOH HOH . L 5 HOH B 55 355 160 HOH HOH . L 5 HOH B 56 356 161 HOH HOH . L 5 HOH B 57 357 166 HOH HOH . L 5 HOH B 58 358 167 HOH HOH . L 5 HOH B 59 359 168 HOH HOH . L 5 HOH B 60 360 169 HOH HOH . L 5 HOH B 61 361 173 HOH HOH . L 5 HOH B 62 362 175 HOH HOH . L 5 HOH B 63 363 178 HOH HOH . L 5 HOH B 64 364 179 HOH HOH . L 5 HOH B 65 365 182 HOH HOH . L 5 HOH B 66 366 185 HOH HOH . L 5 HOH B 67 367 187 HOH HOH . L 5 HOH B 68 368 188 HOH HOH . L 5 HOH B 69 369 189 HOH HOH . L 5 HOH B 70 370 190 HOH HOH . L 5 HOH B 71 371 191 HOH HOH . L 5 HOH B 72 372 194 HOH HOH . L 5 HOH B 73 373 195 HOH HOH . L 5 HOH B 74 374 197 HOH HOH . L 5 HOH B 75 375 199 HOH HOH . L 5 HOH B 76 376 201 HOH HOH . L 5 HOH B 77 377 204 HOH HOH . L 5 HOH B 78 378 206 HOH HOH . L 5 HOH B 79 379 210 HOH HOH . L 5 HOH B 80 380 211 HOH HOH . L 5 HOH B 81 381 212 HOH HOH . L 5 HOH B 82 382 213 HOH HOH . L 5 HOH B 83 383 225 HOH HOH . L 5 HOH B 84 384 229 HOH HOH . L 5 HOH B 85 385 236 HOH HOH . L 5 HOH B 86 386 237 HOH HOH . L 5 HOH B 87 387 244 HOH HOH . L 5 HOH B 88 388 246 HOH HOH . L 5 HOH B 89 389 249 HOH HOH . L 5 HOH B 90 390 250 HOH HOH . L 5 HOH B 91 391 251 HOH HOH . L 5 HOH B 92 392 252 HOH HOH . L 5 HOH B 93 393 254 HOH HOH . L 5 HOH B 94 394 260 HOH HOH . L 5 HOH B 95 395 261 HOH HOH . L 5 HOH B 96 396 262 HOH HOH . L 5 HOH B 97 397 264 HOH HOH . L 5 HOH B 98 398 265 HOH HOH . L 5 HOH B 99 399 266 HOH HOH . L 5 HOH B 100 400 268 HOH HOH . L 5 HOH B 101 401 269 HOH HOH . L 5 HOH B 102 402 272 HOH HOH . L 5 HOH B 103 403 273 HOH HOH . L 5 HOH B 104 404 276 HOH HOH . L 5 HOH B 105 405 277 HOH HOH . L 5 HOH B 106 406 278 HOH HOH . L 5 HOH B 107 407 282 HOH HOH . L 5 HOH B 108 408 288 HOH HOH . L 5 HOH B 109 409 289 HOH HOH . L 5 HOH B 110 410 290 HOH HOH . L 5 HOH B 111 411 293 HOH HOH . L 5 HOH B 112 412 295 HOH HOH . L 5 HOH B 113 413 296 HOH HOH . L 5 HOH B 114 414 298 HOH HOH . L 5 HOH B 115 415 302 HOH HOH . L 5 HOH B 116 416 303 HOH HOH . L 5 HOH B 117 417 304 HOH HOH . L 5 HOH B 118 418 305 HOH HOH . L 5 HOH B 119 419 316 HOH HOH . L 5 HOH B 120 420 317 HOH HOH . L 5 HOH B 121 421 319 HOH HOH . L 5 HOH B 122 422 323 HOH HOH . L 5 HOH B 123 423 325 HOH HOH . L 5 HOH B 124 424 329 HOH HOH . L 5 HOH B 125 425 333 HOH HOH . L 5 HOH B 126 426 335 HOH HOH . L 5 HOH B 127 427 338 HOH HOH . L 5 HOH B 128 428 340 HOH HOH . L 5 HOH B 129 429 341 HOH HOH . L 5 HOH B 130 430 342 HOH HOH . L 5 HOH B 131 431 346 HOH HOH . L 5 HOH B 132 432 347 HOH HOH . L 5 HOH B 133 433 352 HOH HOH . L 5 HOH B 134 434 355 HOH HOH . L 5 HOH B 135 435 363 HOH HOH . L 5 HOH B 136 436 364 HOH HOH . L 5 HOH B 137 437 369 HOH HOH . L 5 HOH B 138 438 371 HOH HOH . L 5 HOH B 139 439 380 HOH HOH . L 5 HOH B 140 440 381 HOH HOH . L 5 HOH B 141 441 384 HOH HOH . L 5 HOH B 142 442 388 HOH HOH . M 5 HOH C 1 301 3 HOH HOH . M 5 HOH C 2 302 5 HOH HOH . M 5 HOH C 3 303 11 HOH HOH . M 5 HOH C 4 304 16 HOH HOH . M 5 HOH C 5 305 42 HOH HOH . M 5 HOH C 6 306 43 HOH HOH . M 5 HOH C 7 307 47 HOH HOH . M 5 HOH C 8 308 51 HOH HOH . M 5 HOH C 9 309 55 HOH HOH . M 5 HOH C 10 310 56 HOH HOH . M 5 HOH C 11 311 58 HOH HOH . M 5 HOH C 12 312 64 HOH HOH . M 5 HOH C 13 313 66 HOH HOH . M 5 HOH C 14 314 71 HOH HOH . M 5 HOH C 15 315 76 HOH HOH . M 5 HOH C 16 316 78 HOH HOH . M 5 HOH C 17 317 80 HOH HOH . M 5 HOH C 18 318 82 HOH HOH . M 5 HOH C 19 319 90 HOH HOH . M 5 HOH C 20 320 91 HOH HOH . M 5 HOH C 21 321 97 HOH HOH . M 5 HOH C 22 322 110 HOH HOH . M 5 HOH C 23 323 116 HOH HOH . M 5 HOH C 24 324 118 HOH HOH . M 5 HOH C 25 325 120 HOH HOH . M 5 HOH C 26 326 123 HOH HOH . M 5 HOH C 27 327 125 HOH HOH . M 5 HOH C 28 328 126 HOH HOH . M 5 HOH C 29 329 127 HOH HOH . M 5 HOH C 30 330 133 HOH HOH . M 5 HOH C 31 331 135 HOH HOH . M 5 HOH C 32 332 138 HOH HOH . M 5 HOH C 33 333 141 HOH HOH . M 5 HOH C 34 334 146 HOH HOH . M 5 HOH C 35 335 151 HOH HOH . M 5 HOH C 36 336 171 HOH HOH . M 5 HOH C 37 337 172 HOH HOH . M 5 HOH C 38 338 177 HOH HOH . M 5 HOH C 39 339 184 HOH HOH . M 5 HOH C 40 340 200 HOH HOH . M 5 HOH C 41 341 202 HOH HOH . M 5 HOH C 42 342 207 HOH HOH . M 5 HOH C 43 343 208 HOH HOH . M 5 HOH C 44 344 216 HOH HOH . M 5 HOH C 45 345 217 HOH HOH . M 5 HOH C 46 346 220 HOH HOH . M 5 HOH C 47 347 222 HOH HOH . M 5 HOH C 48 348 230 HOH HOH . M 5 HOH C 49 349 239 HOH HOH . M 5 HOH C 50 350 241 HOH HOH . M 5 HOH C 51 351 248 HOH HOH . M 5 HOH C 52 352 255 HOH HOH . M 5 HOH C 53 353 259 HOH HOH . M 5 HOH C 54 354 263 HOH HOH . M 5 HOH C 55 355 270 HOH HOH . M 5 HOH C 56 356 275 HOH HOH . M 5 HOH C 57 357 279 HOH HOH . M 5 HOH C 58 358 280 HOH HOH . M 5 HOH C 59 359 281 HOH HOH . M 5 HOH C 60 360 283 HOH HOH . M 5 HOH C 61 361 284 HOH HOH . M 5 HOH C 62 362 285 HOH HOH . M 5 HOH C 63 363 286 HOH HOH . M 5 HOH C 64 364 291 HOH HOH . M 5 HOH C 65 365 292 HOH HOH . M 5 HOH C 66 366 300 HOH HOH . M 5 HOH C 67 367 301 HOH HOH . M 5 HOH C 68 368 309 HOH HOH . M 5 HOH C 69 369 313 HOH HOH . M 5 HOH C 70 370 318 HOH HOH . M 5 HOH C 71 371 320 HOH HOH . M 5 HOH C 72 372 321 HOH HOH . M 5 HOH C 73 373 326 HOH HOH . M 5 HOH C 74 374 328 HOH HOH . M 5 HOH C 75 375 330 HOH HOH . M 5 HOH C 76 376 331 HOH HOH . M 5 HOH C 77 377 332 HOH HOH . M 5 HOH C 78 378 334 HOH HOH . M 5 HOH C 79 379 336 HOH HOH . M 5 HOH C 80 380 343 HOH HOH . M 5 HOH C 81 381 351 HOH HOH . M 5 HOH C 82 382 354 HOH HOH . M 5 HOH C 83 383 356 HOH HOH . M 5 HOH C 84 384 357 HOH HOH . M 5 HOH C 85 385 361 HOH HOH . M 5 HOH C 86 386 365 HOH HOH . M 5 HOH C 87 387 372 HOH HOH . M 5 HOH C 88 388 373 HOH HOH . M 5 HOH C 89 389 378 HOH HOH . M 5 HOH C 90 390 382 HOH HOH . M 5 HOH C 91 391 383 HOH HOH . M 5 HOH C 92 392 385 HOH HOH . M 5 HOH C 93 393 389 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PB GDP . . . E 3 101.812 24.837 144.599 1 14.78 ? PB GDP 202 A 1 HETATM 2 O O1B GDP . . . E 3 102.053 25.433 143.239 1 15.72 ? O1B GDP 202 A 1 HETATM 3 O O2B GDP . . . E 3 102.846 23.844 144.985 1 16.51 ? O2B GDP 202 A 1 HETATM 4 O O3B GDP . . . E 3 100.381 24.333 144.771 1 13.6 ? O3B GDP 202 A 1 HETATM 5 O O3A GDP . . . E 3 101.907 26.032 145.647 1 15.46 ? O3A GDP 202 A 1 HETATM 6 P PA GDP . . . E 3 103.174 26.469 146.649 1 17.55 ? PA GDP 202 A 1 HETATM 7 O O1A GDP . . . E 3 104.376 26.814 145.753 1 22.97 ? O1A GDP 202 A 1 HETATM 8 O O2A GDP . . . E 3 103.379 25.532 147.694 1 17.42 ? O2A GDP 202 A 1 HETATM 9 O O5' GDP . . . E 3 102.603 27.727 147.313 1 17.85 ? O5' GDP 202 A 1 HETATM 10 C C5' GDP . . . E 3 102.283 28.87 146.587 1 19.25 ? C5' GDP 202 A 1 HETATM 11 C C4' GDP . . . E 3 102.423 30.103 147.499 1 19.95 ? C4' GDP 202 A 1 HETATM 12 O O4' GDP . . . E 3 101.439 30.088 148.51 1 18.26 ? O4' GDP 202 A 1 HETATM 13 C C3' GDP . . . E 3 103.758 30.219 148.169 1 22.06 ? C3' GDP 202 A 1 HETATM 14 O O3' GDP . . . E 3 104.124 31.616 148.239 1 24.42 ? O3' GDP 202 A 1 HETATM 15 C C2' GDP . . . E 3 103.474 29.649 149.527 1 19.45 ? C2' GDP 202 A 1 HETATM 16 O O2' GDP . . . E 3 104.306 30.161 150.599 1 22.52 ? O2' GDP 202 A 1 HETATM 17 C C1' GDP . . . E 3 102.051 30.104 149.802 1 18.33 ? C1' GDP 202 A 1 HETATM 18 N N9 GDP . . . E 3 101.328 29.225 150.748 1 14.62 ? N9 GDP 202 A 1 HETATM 19 C C8 GDP . . . E 3 101.172 27.887 150.569 1 14.57 ? C8 GDP 202 A 1 HETATM 20 N N7 GDP . . . E 3 100.39 27.435 151.494 1 12.6 ? N7 GDP 202 A 1 HETATM 21 C C5 GDP . . . E 3 100.038 28.446 152.309 1 12.33 ? C5 GDP 202 A 1 HETATM 22 C C6 GDP . . . E 3 99.174 28.582 153.407 1 12.05 ? C6 GDP 202 A 1 HETATM 23 O O6 GDP . . . E 3 98.559 27.612 153.951 1 12.34 ? O6 GDP 202 A 1 HETATM 24 N N1 GDP . . . E 3 99.038 29.832 153.926 1 13.22 ? N1 GDP 202 A 1 HETATM 25 C C2 GDP . . . E 3 99.683 30.935 153.393 1 14.19 ? C2 GDP 202 A 1 HETATM 26 N N2 GDP . . . E 3 99.378 32.056 154.042 1 17.57 ? N2 GDP 202 A 1 HETATM 27 N N3 GDP . . . E 3 100.421 30.884 152.341 1 15.28 ? N3 GDP 202 A 1 HETATM 28 C C4 GDP . . . E 3 100.645 29.655 151.794 1 14.65 ? C4 GDP 202 A 1 HETATM 29 H H4' GDP . . . E 3 102.281 30.998 146.877 1 23.94 ? H4' GDP 202 A 1 HETATM 30 H H3' GDP . . . E 3 104.512 29.617 147.641 1 26.48 ? H3' GDP 202 A 1 HETATM 31 H HO3' GDP . . . E 3 104.964 31.706 148.711 1 29.3 ? HO3' GDP 202 A 1 HETATM 32 H H2' GDP . . . E 3 103.511 28.551 149.487 1 23.34 ? H2' GDP 202 A 1 HETATM 33 H HO2' GDP . . . E 3 105.23 29.94 150.423 1 27.03 ? HO2' GDP 202 A 1 HETATM 34 H H1' GDP . . . E 3 102.077 31.132 150.191 1 21.99 ? H1' GDP 202 A 1 HETATM 35 H H8 GDP . . . E 3 101.63 27.297 149.785 1 17.49 ? H8 GDP 202 A 1 HETATM 36 H HN1 GDP . . . E 3 98.447 29.959 154.773 1 15.86 ? HN1 GDP 202 A 1 HETATM 37 H HN21 GDP . . . E 3 99.77 32.936 153.74 1 21.09 ? HN21 GDP 202 A 1 HETATM 38 H HN22 GDP . . . E 3 98.776 32.022 154.852 1 21.09 ? HN22 GDP 202 A 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 13 _model_server_stats.query_time_ms 246 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 38 #