data_4M0C
#
_model_server_result.job_id            CZ0k_tcx47xvF3DDBjCEIQ 
_model_server_result.datetime_utc      '2024-11-10 01:26:11' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4m0c 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":303}' 
#
_entry.id    4M0C 
#
_exptl.entry_id    4M0C 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4M0C 
_cell.length_a            48.483 
_cell.length_b            88.709 
_cell.length_c            98.04 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4M0C 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 E N N 
? 4 I N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C MSE 4 A MSE 1 1_555 A N ASN 5 A ASN 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? 
covale ? covale2 A C PRO 55 A PRO 52 1_555 A N MSE 56 A MSE 53 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? 
covale ? covale3 A C MSE 56 A MSE 53 1_555 A N ILE 57 A ILE 54 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? 
covale ? covale4 A C ARG 84 A ARG 81 1_555 A N MSE 85 A MSE 82 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? 
covale ? covale5 A C MSE 85 A MSE 82 1_555 A N SER 86 A SER 83 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? 
covale ? covale6 A C TYR 116 A TYR 113 1_555 A N MSE 117 A MSE 114 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? 
covale ? covale7 A C MSE 117 A MSE 114 1_555 A N ASP 118 A ASP 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? 
covale ? covale8 A C ILE 120 A ILE 117 1_555 A N MSE 121 A MSE 118 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? 
covale ? covale9 A C MSE 121 A MSE 118 1_555 A N ILE 122 A ILE 119 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? 
covale ? covale10 A C ARG 143 A ARG 140 1_555 A N MSE 144 A MSE 141 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? 
covale ? covale11 A C MSE 144 A MSE 141 1_555 A N LEU 145 A LEU 142 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? 
covale ? covale12 A C ALA 172 A ALA 169 1_555 A N MSE 173 A MSE 170 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? 
covale ? covale13 A C MSE 173 A MSE 170 1_555 A N PHE 174 A PHE 171 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
covale ? covale14 B C PRO 55 B PRO 52 1_555 B N MSE 56 B MSE 53 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? 
covale ? covale15 B C MSE 56 B MSE 53 1_555 B N ILE 57 B ILE 54 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? 
covale ? covale16 B C ARG 84 B ARG 81 1_555 B N MSE 85 B MSE 82 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? 
covale ? covale17 B C MSE 85 B MSE 82 1_555 B N SER 86 B SER 83 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? 
covale ? covale18 B C TYR 116 B TYR 113 1_555 B N MSE 117 B MSE 114 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? 
covale ? covale19 B C MSE 117 B MSE 114 1_555 B N ASP 118 B ASP 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? 
covale ? covale20 B C ILE 120 B ILE 117 1_555 B N MSE 121 B MSE 118 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? 
covale ? covale21 B C MSE 121 B MSE 118 1_555 B N ILE 122 B ILE 119 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? 
covale ? covale22 B C ARG 143 B ARG 140 1_555 B N MSE 144 B MSE 141 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.319 ? 
covale ? covale23 B C MSE 144 B MSE 141 1_555 B N LEU 145 B LEU 142 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? 
covale ? covale24 B C ALA 172 B ALA 169 1_555 B N MSE 173 B MSE 170 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? 
covale ? covale25 B C MSE 173 B MSE 170 1_555 B N PHE 174 B PHE 171 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? 
metalc ? metalc1 A ND1 HIS 29 A HIS 26 1_555 D ZN ZN . A ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.067 ? 
metalc ? metalc2 A OE2 GLU 32 A GLU 29 1_555 D ZN ZN . A ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.23 ? 
metalc ? metalc3 B OD2 ASP 51 B ASP 48 1_555 H ZN ZN . B ZN 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.062 ? 
metalc ? metalc4 B OD2 ASP 194 B ASP 191 1_555 G ZN ZN . B ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.961 ? 
metalc ? metalc5 G ZN ZN . B ZN 302 1_555 K O HOH . B HOH 448 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.203 ? 
metalc ? metalc6 H ZN ZN . B ZN 303 1_555 K O HOH . B HOH 449 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.386 ? 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 170 n n 
C1 C2 GOL sing 171 n n 
C1 H11 GOL sing 172 n n 
C1 H12 GOL sing 173 n n 
O1 HO1 GOL sing 174 n n 
C2 O2 GOL sing 175 n n 
C2 C3 GOL sing 176 n n 
C2 H2 GOL sing 177 n n 
O2 HO2 GOL sing 178 n n 
C3 O3 GOL sing 179 n n 
C3 H31 GOL sing 180 n n 
C3 H32 GOL sing 181 n n 
O3 HO3 GOL sing 182 n n 
#
_atom_sites.entry_id                     4M0C 
_atom_sites.fract_transf_matrix[1][1]    0.020626 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011273 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.0102 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 FMN A 1 301 1 FMN FMN . 
D 3 ZN A 1 302 1 ZN ZN . 
E 4 GOL A 1 303 1 GOL GOL . 
F 2 FMN B 1 301 2 FMN FMN . 
G 3 ZN B 1 302 2 ZN ZN . 
H 3 ZN B 1 303 3 ZN ZN . 
I 4 GOL B 1 304 2 GOL GOL . 
J 5 HOH A 1 401 1 HOH HOH . 
J 5 HOH A 2 402 2 HOH HOH . 
J 5 HOH A 3 403 3 HOH HOH . 
J 5 HOH A 4 404 4 HOH HOH . 
J 5 HOH A 5 405 8 HOH HOH . 
J 5 HOH A 6 406 9 HOH HOH . 
J 5 HOH A 7 407 11 HOH HOH . 
J 5 HOH A 8 408 12 HOH HOH . 
J 5 HOH A 9 409 14 HOH HOH . 
J 5 HOH A 10 410 15 HOH HOH . 
J 5 HOH A 11 411 16 HOH HOH . 
J 5 HOH A 12 412 17 HOH HOH . 
J 5 HOH A 13 413 18 HOH HOH . 
J 5 HOH A 14 414 19 HOH HOH . 
J 5 HOH A 15 415 21 HOH HOH . 
J 5 HOH A 16 416 24 HOH HOH . 
J 5 HOH A 17 417 25 HOH HOH . 
J 5 HOH A 18 418 28 HOH HOH . 
J 5 HOH A 19 419 29 HOH HOH . 
J 5 HOH A 20 420 32 HOH HOH . 
J 5 HOH A 21 421 33 HOH HOH . 
J 5 HOH A 22 422 37 HOH HOH . 
J 5 HOH A 23 423 39 HOH HOH . 
J 5 HOH A 24 424 41 HOH HOH . 
J 5 HOH A 25 425 43 HOH HOH . 
J 5 HOH A 26 426 44 HOH HOH . 
J 5 HOH A 27 427 46 HOH HOH . 
J 5 HOH A 28 428 48 HOH HOH . 
J 5 HOH A 29 429 51 HOH HOH . 
J 5 HOH A 30 430 52 HOH HOH . 
J 5 HOH A 31 431 56 HOH HOH . 
J 5 HOH A 32 432 58 HOH HOH . 
J 5 HOH A 33 433 60 HOH HOH . 
J 5 HOH A 34 434 62 HOH HOH . 
J 5 HOH A 35 435 65 HOH HOH . 
J 5 HOH A 36 436 66 HOH HOH . 
J 5 HOH A 37 437 71 HOH HOH . 
J 5 HOH A 38 438 72 HOH HOH . 
J 5 HOH A 39 439 73 HOH HOH . 
J 5 HOH A 40 440 74 HOH HOH . 
J 5 HOH A 41 441 77 HOH HOH . 
J 5 HOH A 42 442 78 HOH HOH . 
J 5 HOH A 43 443 79 HOH HOH . 
J 5 HOH A 44 444 80 HOH HOH . 
J 5 HOH A 45 445 82 HOH HOH . 
J 5 HOH A 46 446 84 HOH HOH . 
J 5 HOH A 47 447 86 HOH HOH . 
J 5 HOH A 48 448 87 HOH HOH . 
J 5 HOH A 49 449 89 HOH HOH . 
J 5 HOH A 50 450 91 HOH HOH . 
J 5 HOH A 51 451 93 HOH HOH . 
J 5 HOH A 52 452 94 HOH HOH . 
J 5 HOH A 53 453 98 HOH HOH . 
J 5 HOH A 54 454 100 HOH HOH . 
J 5 HOH A 55 455 101 HOH HOH . 
J 5 HOH A 56 456 102 HOH HOH . 
J 5 HOH A 57 457 103 HOH HOH . 
J 5 HOH A 58 458 104 HOH HOH . 
J 5 HOH A 59 459 106 HOH HOH . 
J 5 HOH A 60 460 107 HOH HOH . 
K 5 HOH B 1 401 5 HOH HOH . 
K 5 HOH B 2 402 6 HOH HOH . 
K 5 HOH B 3 403 7 HOH HOH . 
K 5 HOH B 4 404 10 HOH HOH . 
K 5 HOH B 5 405 13 HOH HOH . 
K 5 HOH B 6 406 20 HOH HOH . 
K 5 HOH B 7 407 22 HOH HOH . 
K 5 HOH B 8 408 23 HOH HOH . 
K 5 HOH B 9 409 26 HOH HOH . 
K 5 HOH B 10 410 27 HOH HOH . 
K 5 HOH B 11 411 30 HOH HOH . 
K 5 HOH B 12 412 31 HOH HOH . 
K 5 HOH B 13 413 34 HOH HOH . 
K 5 HOH B 14 414 35 HOH HOH . 
K 5 HOH B 15 415 36 HOH HOH . 
K 5 HOH B 16 416 38 HOH HOH . 
K 5 HOH B 17 417 40 HOH HOH . 
K 5 HOH B 18 418 42 HOH HOH . 
K 5 HOH B 19 419 45 HOH HOH . 
K 5 HOH B 20 420 47 HOH HOH . 
K 5 HOH B 21 421 49 HOH HOH . 
K 5 HOH B 22 422 50 HOH HOH . 
K 5 HOH B 23 423 53 HOH HOH . 
K 5 HOH B 24 424 54 HOH HOH . 
K 5 HOH B 25 425 55 HOH HOH . 
K 5 HOH B 26 426 57 HOH HOH . 
K 5 HOH B 27 427 59 HOH HOH . 
K 5 HOH B 28 428 61 HOH HOH . 
K 5 HOH B 29 429 63 HOH HOH . 
K 5 HOH B 30 430 64 HOH HOH . 
K 5 HOH B 31 431 67 HOH HOH . 
K 5 HOH B 32 432 68 HOH HOH . 
K 5 HOH B 33 433 69 HOH HOH . 
K 5 HOH B 34 434 70 HOH HOH . 
K 5 HOH B 35 435 75 HOH HOH . 
K 5 HOH B 36 436 76 HOH HOH . 
K 5 HOH B 37 437 81 HOH HOH . 
K 5 HOH B 38 438 83 HOH HOH . 
K 5 HOH B 39 439 85 HOH HOH . 
K 5 HOH B 40 440 88 HOH HOH . 
K 5 HOH B 41 441 90 HOH HOH . 
K 5 HOH B 42 442 92 HOH HOH . 
K 5 HOH B 43 443 95 HOH HOH . 
K 5 HOH B 44 444 96 HOH HOH . 
K 5 HOH B 45 445 97 HOH HOH . 
K 5 HOH B 46 446 99 HOH HOH . 
K 5 HOH B 47 447 105 HOH HOH . 
K 5 HOH B 48 448 108 HOH HOH . 
K 5 HOH B 49 449 109 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . E 4 17.116 10.387 3.073 1 58.06 ? C1 GOL 303 A 1 
HETATM 2 O O1 GOL . . . E 4 16.605 11.545 2.444 1 56.89 ? O1 GOL 303 A 1 
HETATM 3 C C2 GOL . . . E 4 16.752 9.134 2.279 1 60.75 ? C2 GOL 303 A 1 
HETATM 4 O O2 GOL . . . E 4 15.347 9.003 2.159 1 62.74 ? O2 GOL 303 A 1 
HETATM 5 C C3 GOL . . . E 4 17.319 7.915 2.994 1 62.21 ? C3 GOL 303 A 1 
HETATM 6 O O3 GOL . . . E 4 18.22 7.237 2.147 1 65.68 ? O3 GOL 303 A 1 
#
_model_server_stats.io_time_ms              23 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           294 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           6 
#