data_4M0H # _model_server_result.job_id 8U68mmqEf4PXr7mtTXz21g _model_server_result.datetime_utc '2024-11-05 00:33:55' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4m0h # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":401}' # _entry.id 4M0H # _exptl.entry_id 4M0H _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4M0H _cell.length_a 92.56 _cell.length_b 92.56 _cell.length_c 131.9 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4M0H _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E 1 1 B,F 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C VAL 48 A VAL 153 1_555 A N MSE 49 A MSE 154 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale2 A C MSE 49 A MSE 154 1_555 A N ARG 50 A ARG 155 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.348 ? covale ? covale3 A C GLU 63 A GLU 168 1_555 A N MSE 64 A MSE 169 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.362 ? covale ? covale4 A C MSE 64 A MSE 169 1_555 A N GLU 65 A GLU 170 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale5 A C VAL 72 A VAL 177 1_555 A N MSE 73 A MSE 178 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? covale ? covale6 A C MSE 73 A MSE 178 1_555 A N ARG 74 A ARG 179 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.346 ? covale ? covale7 A C LEU 106 A LEU 211 1_555 A N MSE 107 A MSE 212 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale8 A C MSE 107 A MSE 212 1_555 A N ALA 108 A ALA 213 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.353 ? covale ? covale9 A C ASP 119 A ASP 224 1_555 A N MSE 120 A MSE 225 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.318 ? covale ? covale10 A C MSE 120 A MSE 225 1_555 A N PRO 121 A PRO 226 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.354 ? covale ? covale11 A C VAL 124 A VAL 229 1_555 A N MSE 125 A MSE 230 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.343 ? covale ? covale12 A C MSE 125 A MSE 230 1_555 A N ARG 126 A ARG 231 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.339 ? covale ? covale13 A C ARG 176 A ARG 281 1_555 A N MSE 177 A MSE 282 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale14 A C MSE 177 A MSE 282 1_555 A N TYR 178 A TYR 283 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.348 ? covale ? covale15 B C VAL 48 B VAL 153 1_555 B N MSE 49 B MSE 154 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.34 ? covale ? covale16 B C MSE 49 B MSE 154 1_555 B N ARG 50 B ARG 155 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.321 ? covale ? covale17 B C GLU 63 B GLU 168 1_555 B N MSE 64 B MSE 169 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.34 ? covale ? covale18 B C MSE 64 B MSE 169 1_555 B N GLU 65 B GLU 170 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale19 B C VAL 72 B VAL 177 1_555 B N MSE 73 B MSE 178 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.363 ? covale ? covale20 B C MSE 73 B MSE 178 1_555 B N ARG 74 B ARG 179 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.348 ? covale ? covale21 B C LEU 106 B LEU 211 1_555 B N MSE 107 B MSE 212 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale22 B C MSE 107 B MSE 212 1_555 B N ALA 108 B ALA 213 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale23 B C ASP 119 B ASP 224 1_555 B N MSE 120 B MSE 225 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale24 B C MSE 120 B MSE 225 1_555 B N PRO 121 B PRO 226 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.352 ? covale ? covale25 B C VAL 124 B VAL 229 1_555 B N MSE 125 B MSE 230 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.34 ? covale ? covale26 B C MSE 125 B MSE 230 1_555 B N ARG 126 B ARG 231 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.357 ? covale ? covale27 B C ARG 176 B ARG 281 1_555 B N MSE 177 B MSE 282 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.351 ? covale ? covale28 B C MSE 177 B MSE 282 1_555 B N TYR 178 B TYR 283 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.351 ? # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # _atom_sites.entry_id 4M0H _atom_sites.fract_transf_matrix[1][1] 0.010804 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010804 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007582 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 GOL A 1 401 338 GOL GOL . D 3 CL A 1 402 339 CL CL . E 4 HOH A 1 501 340 HOH HOH . E 4 HOH A 2 502 343 HOH HOH . E 4 HOH A 3 503 344 HOH HOH . E 4 HOH A 4 504 345 HOH HOH . E 4 HOH A 5 505 346 HOH HOH . E 4 HOH A 6 506 347 HOH HOH . E 4 HOH A 7 507 349 HOH HOH . E 4 HOH A 8 508 350 HOH HOH . E 4 HOH A 9 509 351 HOH HOH . E 4 HOH A 10 510 352 HOH HOH . E 4 HOH A 11 511 353 HOH HOH . E 4 HOH A 12 512 354 HOH HOH . E 4 HOH A 13 513 356 HOH HOH . E 4 HOH A 14 514 362 HOH HOH . E 4 HOH A 15 515 363 HOH HOH . E 4 HOH A 16 516 364 HOH HOH . E 4 HOH A 17 517 365 HOH HOH . E 4 HOH A 18 518 366 HOH HOH . E 4 HOH A 19 519 367 HOH HOH . E 4 HOH A 20 520 368 HOH HOH . E 4 HOH A 21 521 369 HOH HOH . E 4 HOH A 22 522 370 HOH HOH . E 4 HOH A 23 523 371 HOH HOH . E 4 HOH A 24 524 373 HOH HOH . E 4 HOH A 25 525 374 HOH HOH . E 4 HOH A 26 526 375 HOH HOH . E 4 HOH A 27 527 378 HOH HOH . E 4 HOH A 28 528 380 HOH HOH . E 4 HOH A 29 529 381 HOH HOH . E 4 HOH A 30 530 382 HOH HOH . E 4 HOH A 31 531 387 HOH HOH . E 4 HOH A 32 532 388 HOH HOH . E 4 HOH A 33 533 389 HOH HOH . E 4 HOH A 34 534 390 HOH HOH . E 4 HOH A 35 535 391 HOH HOH . E 4 HOH A 36 536 392 HOH HOH . E 4 HOH A 37 537 393 HOH HOH . E 4 HOH A 38 538 394 HOH HOH . E 4 HOH A 39 539 395 HOH HOH . E 4 HOH A 40 540 396 HOH HOH . E 4 HOH A 41 541 397 HOH HOH . E 4 HOH A 42 542 398 HOH HOH . E 4 HOH A 43 543 403 HOH HOH . E 4 HOH A 44 544 404 HOH HOH . E 4 HOH A 45 545 405 HOH HOH . E 4 HOH A 46 546 406 HOH HOH . E 4 HOH A 47 547 407 HOH HOH . E 4 HOH A 48 548 408 HOH HOH . E 4 HOH A 49 549 409 HOH HOH . E 4 HOH A 50 550 410 HOH HOH . E 4 HOH A 51 551 411 HOH HOH . E 4 HOH A 52 552 412 HOH HOH . E 4 HOH A 53 553 414 HOH HOH . E 4 HOH A 54 554 416 HOH HOH . E 4 HOH A 55 555 417 HOH HOH . E 4 HOH A 56 556 418 HOH HOH . E 4 HOH A 57 557 419 HOH HOH . E 4 HOH A 58 558 420 HOH HOH . E 4 HOH A 59 559 421 HOH HOH . E 4 HOH A 60 560 422 HOH HOH . E 4 HOH A 61 561 430 HOH HOH . F 4 HOH B 1 401 341 HOH HOH . F 4 HOH B 2 402 342 HOH HOH . F 4 HOH B 3 403 348 HOH HOH . F 4 HOH B 4 404 355 HOH HOH . F 4 HOH B 5 405 357 HOH HOH . F 4 HOH B 6 406 358 HOH HOH . F 4 HOH B 7 407 359 HOH HOH . F 4 HOH B 8 408 360 HOH HOH . F 4 HOH B 9 409 361 HOH HOH . F 4 HOH B 10 410 372 HOH HOH . F 4 HOH B 11 411 376 HOH HOH . F 4 HOH B 12 412 377 HOH HOH . F 4 HOH B 13 413 379 HOH HOH . F 4 HOH B 14 414 383 HOH HOH . F 4 HOH B 15 415 384 HOH HOH . F 4 HOH B 16 416 385 HOH HOH . F 4 HOH B 17 417 386 HOH HOH . F 4 HOH B 18 418 399 HOH HOH . F 4 HOH B 19 419 400 HOH HOH . F 4 HOH B 20 420 401 HOH HOH . F 4 HOH B 21 421 402 HOH HOH . F 4 HOH B 22 422 413 HOH HOH . F 4 HOH B 23 423 415 HOH HOH . F 4 HOH B 24 424 423 HOH HOH . F 4 HOH B 25 425 424 HOH HOH . F 4 HOH B 26 426 425 HOH HOH . F 4 HOH B 27 427 426 HOH HOH . F 4 HOH B 28 428 427 HOH HOH . F 4 HOH B 29 429 428 HOH HOH . F 4 HOH B 30 430 429 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . C 2 57.203 15.614 38.854 1 66.45 ? C1 GOL 401 A 1 HETATM 2 O O1 GOL . . . C 2 57.797 15.792 40.128 1 67.69 ? O1 GOL 401 A 1 HETATM 3 C C2 GOL . . . C 2 57.722 14.35 38.212 1 65.48 ? C2 GOL 401 A 1 HETATM 4 O O2 GOL . . . C 2 57.439 13.237 39.056 1 63.71 ? O2 GOL 401 A 1 HETATM 5 C C3 GOL . . . C 2 57.044 14.145 36.878 1 66.87 ? C3 GOL 401 A 1 HETATM 6 O O3 GOL . . . C 2 57.531 12.979 36.236 1 68.17 ? O3 GOL 401 A 1 # _model_server_stats.io_time_ms 22 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 238 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 6 #